Search Results - "Zhu, Yafeng"

DEqMS: A Method for Accurate Variance Estimation in Differential Protein Expression Analysis by Zhu, Yafeng, Orre, Lukas M., Zhou Tran, Yan, Mermelekas, Georgios, Johansson, Henrik J., Malyutina, Alina, Anders, Simon, Lehtiö, Janne

“…Differential analysis of MS-data to identify biomarkers or to understand biology is a cornerstone in proteomics. DEqMS is a robust method for analysis of both…”
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Identification of a thermostable cellobiose 2‐epimerase from Caldicellulosiruptor sp. Rt8.B8 and production of epilactose using Bacillus subtilis by Liangfei, Li, Yafeng, Zhu, Kai, Xu, Zheng, Xu

“…BACKGROUND Epilactose, a potential prebiotics, was derived from lactose through enzymatic catalysis. However, production and purification of epilactose are…”
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Nitric oxide protects against cochlear hair cell damage and noise-induced hearing loss through glucose metabolic reprogramming by Yang, Haidi, Zhu, Yafeng, Ye, Yongyi, Guan, Jiao, Min, Xin, Xiong, Hao

“…Nitric oxide (NO) is critically involved in the regulation of a wide variety of physiological and pathophysiological processes. However, the role of NO in the…”
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The cross-boundary of land degradation in Mongolia and China and achieving its neutrality - challenges and opportunities by Chan, Faith Ka Shun, Chen, Jiannan, Li, Pengfei, Wang, Juanle, Wang, Jiayu, Zhu, Yafeng

“…[Display omitted] •Land degradation is challenging for future security in China and Mongolia.•“Land Degradation Neutrality” aims to achieve land…”
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Breast cancer quantitative proteome and proteogenomic landscape by Johansson, Henrik J., Socciarelli, Fabio, Vacanti, Nathaniel M., Haugen, Mads H., Zhu, Yafeng, Siavelis, Ioannis, Fernandez-Woodbridge, Alejandro, Aure, Miriam R., Sennblad, Bengt, Vesterlund, Mattias, Branca, Rui M., Orre, Lukas M., Huss, Mikael, Fredlund, Erik, Beraki, Elsa, Garred, Øystein, Boekel, Jorrit, Sauer, Torill, Zhao, Wei, Nord, Silje, Höglander, Elen K., Jans, Daniel C., Brismar, Hjalmar, Haukaas, Tonje H., Bathen, Tone F., Schlichting, Ellen, Naume, Bjørn, Luders, Torben, Borgen, Elin, Kristensen, Vessela N., Russnes, Hege G., Lingjærde, Ole Christian, Mills, Gordon B., Sahlberg, Kristine K., Børresen-Dale, Anne-Lise, Lehtiö, Janne

“…In the preceding decades, molecular characterization has revolutionized breast cancer (BC) research and therapeutic approaches. Presented herein, an unbiased…”
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Discovery of coding regions in the human genome by integrated proteogenomics analysis workflow by Zhu, Yafeng, Orre, Lukas M., Johansson, Henrik J., Huss, Mikael, Boekel, Jorrit, Vesterlund, Mattias, Fernandez-Woodbridge, Alejandro, Branca, Rui M. M., Lehtiö, Janne

“…Proteogenomics enable the discovery of novel peptides (from unannotated genomic protein-coding loci) and single amino acid variant peptides (derived from…”
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In-depth human plasma proteome analysis captures tissue proteins and transfer of protein variants across the placenta by Pernemalm, Maria, Sandberg, AnnSofi, Zhu, Yafeng, Boekel, Jorrit, Tamburro, Davide, Schwenk, Jochen M, Björk, Albin, Wahren-Herlenius, Marie, Åmark, Hanna, Östenson, Claes-Göran, Westgren, Magnus, Lehtiö, Janne

“…Here, we present a method for in-depth human plasma proteome analysis based on high-resolution isoelectric focusing HiRIEF LC-MS/MS, demonstrating high…”
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Editorial: Systems biology approach for the mechanisms underlying chronic liver disease by Liu, Zhengtao, Zhu, Yafeng, Zhang, Cheng, Lee, Sunjae

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Increased expression of peptides from non-coding genes in cancer proteomics datasets suggests potential tumor neoantigens by Xiang, Rong, Ma, Leyao, Yang, Mingyu, Zheng, Zetian, Chen, Xiaofang, Jia, Fujian, Xie, Fanfan, Zhou, Yiming, Li, Fuqiang, Wu, Kui, Zhu, Yafeng

“…Neoantigen-based immunotherapy has yielded promising results in clinical trials. However, it is limited to tumor-specific mutations, and is often tailored to…”
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Extracellular Vesicles for the Treatment of Radiation-Induced Normal Tissue Toxicity in the Lung by Montay-Gruel, Pierre, Zhu, Yafeng, Petit, Benoit, Leavitt, Ron, Warn, Mike, Giedzinski, Erich, Ollivier, Jonathan, Sinclair, David A, Vozenin, Marie-Catherine, Limoli, Charles L

“…Human stem cell-derived extracellular vesicles (EV) provide many advantages over cell-based therapies for the treatment of functionally compromised tissue beds…”
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Hydrogen Bonds in Disulfonic-Functionalized Acid Ionic Liquids for Efficient Biodiesel Synthesis by Gao, Jian, Zhu, Yafeng, Liu, Wenqi, Jiang, Suyu, Zhang, Jie, Ma, Wei

“…Regulating the states of hydrogen bonds in ionic liquids (ILs) is an effective way to improve their catalytic performance. In this paper,…”
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Ion Sputter Induced Interfacial Reaction in Prototypical Metal-GaN System by Huang, Rong, Li, Fangsen, Liu, Tong, Zhao, Yanfei, Zhu, Yafeng, Shen, Yang, Lu, Xiaoming, Huang, Zengli, Liu, Jianping, Zhang, Liqun, Zhang, Shuming, Li, Zhanping, Dingsun, An, Yang, Hui

“…Contact property is now becoming to be a key factor for achieving high performance and high reliability in GaN-based III-V semiconductor devices. Energetic ion…”
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Exploring community perceptions and engagement of nature-based solutions: The case of Ningbo, a Chinese coastal sponge city by Chan, Faith Ka Shun, Lu, Lingwen, Zhu, Yafeng, Balzan, Mario V., Pezzoli, Alessandro, Johnson, Matthew, Zhu, Fangfang, Ruan, Tian, Luo, Gang, Li, Gang, Xu, Yaoyang

“…•Public perceptions and understanding of NBS infrastructure (i.e. bioretention measure) and the environmental learning process in the case of Ningbo – a Sponge…”
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Publisher Correction: Discovery of coding regions in the human genome by integrated proteogenomics analysis workflow by Zhu, Yafeng, Orre, Lukas M., Johansson, Henrik J., Huss, Mikael, Boekel, Jorrit, Vesterlund, Mattias, Fernandez-Woodbridge, Alejandro, Branca, Rui M. M., Lehtiö, Janne

“…In the original version of this Article, extraneous text not belonging to the Article was accidentally appended to the results section. This error has now been…”
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Construction and Characterization of a Fluorescent Sendai Virus Carrying the Gene for Envelope Fusion Protein Fused with Enhanced Green Fluorescent Protein by MIYAZAKI, Masao, SEGAWA, Hiroaki, YAMASHITA, Tetsuro, ZHU, Yafeng, TAKIZAWA, Kaoru, HASEGAWA, Mamoru, TAIRA, Hideharu

“…Sendai virus (SeV) is an enveloped virus with a non-segmented negative-strand RNA genome. SeV envelope fusion (F) glycoproteins play crucial roles in the viral…”
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Identification of a thermostable cellobiose 2‐epimerase from Caldicellulosiruptor sp. Rt8. B8 and production of epilactose using Bacillus subtilis by Liangfei, Li, Yafeng, Zhu, Kai, Xu, Zheng, Xu

“…Abstract BACKGROUND Epilactose, a potential prebiotics, was derived from lactose through enzymatic catalysis. However, production and purification of…”
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Correlation Study between Rural Human Settlement Health Factors: A Case Study of Xiangxi, China by Tong, Shuyuan, Zhu, Yafeng, Li, Zhe

“…With the emergence of the Industry 4.0 era in China, more refined methods are being proposed for healthy living requirements for human settlements. Since the…”
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Characteristics of spatial protein expression in the mouse cochlear sensory epithelia: Implications for age-related hearing loss by Lao, Huilin, Zhu, Yafeng, Yang, Mei, Wang, Lingshuo, Tang, Jie, Xiong, Hao

“…•Thousands of proteins in the cochlear sensory epithelia were detected by microscale proteomics.•Hundreds of spatially differentially expressed proteins were…”
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SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization by Orre, Lukas Minus, Vesterlund, Mattias, Pan, Yanbo, Arslan, Taner, Zhu, Yafeng, Fernandez Woodbridge, Alejandro, Frings, Oliver, Fredlund, Erik, Lehtiö, Janne

“…Subcellular localization is a main determinant of protein function; however, a global view of cellular proteome organization remains relatively unexplored. We…”
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Angular dependent XPS study of surface band bending on Ga-polar n-GaN by Huang, Rong, Liu, Tong, Zhao, Yanfei, Zhu, Yafeng, Huang, Zengli, Li, Fangsen, Liu, Jianping, Zhang, Liqun, Zhang, Shuming, Dingsun, An, Yang, Hui

“…•Angular dependent XPS was used to study surface band bending on GaN.•Origin of surface band bending was investigated by surface composition…”
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