Search Results - "Zhu, Huachen"

Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree by Yu, Guangchuang, Lam, Tommy Tsan-Yuk, Zhu, Huachen, Guan, Yi

“…Ggtree is a comprehensive R package for visualizing and annotating phylogenetic trees with associated data. It can also map and visualize associated external…”
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Epidemiology of avian influenza A H7N9 virus in human beings across five epidemics in mainland China, 2013–17: an epidemiological study of laboratory-confirmed case series by Wang, Xiling, PhD, Jiang, Hui, MD, Wu, Peng, PhD, Uyeki, Timothy M, MD, Feng, Luzhao, PhD, Lai, Shengjie, MD, Wang, Lili, MSc, Huo, Xiang, MD, Xu, Ke, MD, Chen, Enfu, MD, Wang, Xiaoxiao, MD, He, Jianfeng, MD, Kang, Min, MD, Zhang, Renli, MD, Zhang, Jin, MD, Wu, Jiabing, MD, Hu, Shixiong, MD, Zhang, Hengjiao, MD, Liu, Xiaoqing, MD, Fu, Weijie, MD, Ou, Jianming, MD, Wu, Shenggen, MD, Qin, Ying, PhD, Zhang, Zhijie, PhD, Shi, Yujing, MD, Zhang, Juanjuan, MSc, Artois, Jean, PhD, Fang, Vicky J, MPhil, Zhu, Huachen, PhD, Guan, Yi, Prof, Gilbert, Marius, PhD, Horby, Peter W, Prof, Leung, Gabriel M, Prof, Gao, George F, Prof, Cowling, Benjamin J, Prof, Yu, Hongjie, Prof

“…Summary Background The avian influenza A H7N9 virus has caused infections in human beings in China since 2013. A large epidemic in 2016–17 prompted concerns…”
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Co-circulation of three camel coronavirus species and recombination of MERS-CoVs in Saudi Arabia by Sabir, Jamal S. M., Lam, Tommy T.-Y., Ahmed, Mohamed M. M., Li, Lifeng, Shen, Yongyi, Abo-Aba, Salah E. M., Qureshi, Muhammad I., Abu-Zeid, Mohamed, Zhang, Yu, Khiyami, Mohammad A., Alharbi, Njud S., Hajrah, Nahid H., Sabir, Meshaal J., Mutwakil, Mohammed H. Z., Kabli, Saleh A., Alsulaimany, Faten A. S., Obaid, Abdullah Y., Zhou, Boping, Smith, David K., Holmes, Edward C., Zhu, Huachen, Guan, Yi

“…Outbreaks of Middle East respiratory syndrome (MERS) raise questions about the prevalence and evolution of the MERS coronavirus (CoV) in its animal reservoir…”
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Dexamethasone ameliorates severe pneumonia but slightly enhances viral replication in the lungs of SARS-CoV-2-infected Syrian hamsters by Yuan, Lunzhi, Zhou, Ming, Ma, Jian, Liu, Xuan, Chen, Peiwen, Zhu, Huachen, Tang, Qiyi, Cheng, Tong, Guan, Yi, Xia, Ningshao

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The genesis and source of the H7N9 influenza viruses causing human infections in China by Lam, Tommy Tsan-Yuk, Wang, Jia, Shen, Yongyi, Zhou, Boping, Duan, Lian, Cheung, Chung-Lam, Ma, Chi, Lycett, Samantha J., Leung, Connie Yin-Hung, Chen, Xinchun, Li, Lifeng, Hong, Wenshan, Chai, Yujuan, Zhou, Linlin, Liang, Huyi, Ou, Zhihua, Liu, Yongmei, Farooqui, Amber, Kelvin, David J., Poon, Leo L. M., Smith, David K., Pybus, Oliver G., Leung, Gabriel M., Shu, Yuelong, Webster, Robert G., Webby, Richard J., Peiris, Joseph S. M., Rambaut, Andrew, Zhu, Huachen, Guan, Yi

“…Evolutionary analyses show that H7 influenza viruses probably transferred from ducks to chickens in China on at least two independent occasions, and that…”
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Reconstructed influenza A/H3N2 infection histories reveal variation in incidence and antibody dynamics over the life course by Hay, James A., Zhu, Huachen, Jiang, Chao Qiang, Kwok, Kin On, Shen, Ruiyin, Kucharski, Adam, Yang, Bingyi, Read, Jonathan M., Lessler, Justin, Cummings, Derek A. T., Riley, Steven

“…Humans experience many influenza infections over their lives, resulting in complex and varied immunological histories. Although experimental and quantitative…”
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Estimating the life course of influenza A(H3N2) antibody responses from cross-sectional data by Kucharski, Adam J, Lessler, Justin, Read, Jonathan M, Zhu, Huachen, Jiang, Chao Qiang, Guan, Yi, Cummings, Derek A T, Riley, Steven

“…The immunity of a host population against specific influenza A strains can influence a number of important biological processes, from the emergence of new…”
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Gender associates with both susceptibility to infection and pathogenesis of SARS-CoV-2 in Syrian hamster by Yuan, Lunzhi, Zhu, Huachen, Zhou, Ming, Ma, Jian, Chen, Rirong, Chen, Yao, Chen, Liqiang, Wu, Kun, Cai, Minping, Hong, Junping, Li, Lifeng, Liu, Che, Yu, Huan, Zhang, Yali, Wang, Jia, Zhang, Tianying, Ge, Shengxiang, Zhang, Jun, Yuan, Quan, Chen, Yixin, Tang, Qiyi, Chen, Honglin, Cheng, Tong, Guan, Yi, Xia, Ningshao

“…Epidemiological studies of the COVID-19 patients have suggested the male bias in outcomes of lung illness. To experimentally demonstrate the epidemiological…”
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Ferrets as Models for Influenza Virus Transmission Studies and Pandemic Risk Assessments by Belser, Jessica A, Barclay, Wendy, Barr, Ian, Fouchier, Ron A M, Matsuyama, Ryota, Nishiura, Hiroshi, Peiris, Malik, Russell, Charles J, Subbarao, Kanta, Zhu, Huachen, Yen, Hui-Ling

“…The ferret transmission model is extensively used to assess the pandemic potential of emerging influenza viruses, yet experimental conditions and reported…”
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Amino Acid Substitutions in Polymerase Basic Protein 2 Gene Contribute to the Pathogenicity of the Novel A/H7N9 Influenza Virus in Mammalian Hosts by Mok, Chris Ka Pun, Lee, Horace Hok Yeung, Lestra, Maxime, Nicholls, John Malcolm, Chan, Michael Chi Wai, Sia, Sin Fun, Zhu, Huachen, Poon, Leo Lit Man, Guan, Yi, Peiris, Joseph Sriyal Malik

“…Classifications Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Long term intrinsic cycling in human life course antibody responses to influenza A(H3N2): an observational and modeling study by Yang, Bingyi, García-Carreras, Bernardo, Lessler, Justin, Read, Jonathan M, Zhu, Huachen, Metcalf, C Jessica E, Hay, James A, Kwok, Kin O, Shen, Ruiyun, Jiang, Chao Q, Guan, Yi, Riley, Steven, Cummings, Derek A

“…Over a life course, human adaptive immunity to antigenically mutable pathogens exhibits competitive and facilitative interactions. We hypothesize that such…”
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Evidence for antigenic seniority in influenza A (H3N2) antibody responses in southern China by Lessler, Justin, Riley, Steven, Read, Jonathan M, Wang, Shuying, Zhu, Huachen, Smith, Gavin J D, Guan, Yi, Jiang, Chao Qiang, Cummings, Derek A T

“…A key observation about the human immune response to repeated exposure to influenza A is that the first strain infecting an individual apparently produces the…”
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Intranasal influenza-vectored COVID-19 vaccine restrains the SARS-CoV-2 inflammatory response in hamsters by Zhang, Liang, Jiang, Yao, He, Jinhang, Chen, Junyu, Qi, Ruoyao, Yuan, Lunzhi, Shao, Tiange, Zhao, Hui, Chen, Congjie, Chen, Yaode, Wang, Xijing, Lei, Xing, Gao, Qingxiang, Zhuang, Chunlan, Zhou, Ming, Ma, Jian, Liu, Wei, Yang, Man, Fu, Rao, Wu, Yangtao, Chen, Feng, Xiong, Hualong, Nie, Meifeng, Chen, Yiyi, Wu, Kun, Fang, Mujin, Wang, Yingbin, Zheng, Zizheng, Huang, Shoujie, Ge, Shengxiang, Cheng, Shih Chin, Zhu, Huachen, Cheng, Tong, Yuan, Quan, Wu, Ting, Zhang, Jun, Chen, Yixin, Zhang, Tianying, Li, Changgui, Qi, Hai, Guan, Yi, Xia, Ningshao

“…The emergence of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) variants and “anatomical escape” characteristics threaten the effectiveness of…”
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Robust expansion of phylogeny for fast-growing genome sequence data by Ye, Yongtao, Shum, Marcus H, Tsui, Joseph L, Yu, Guangchuang, Smith, David K, Zhu, Huachen, Wu, Joseph T, Guan, Yi, Lam, Tommy Tsan-Yuk

“…Massive sequencing of SARS-CoV-2 genomes has urged novel methods that employ existing phylogenies to add new samples efficiently instead of de novo inference…”
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The persistence of multiple strains of avian influenza in live bird markets by Pinsent, Amy, Pepin, Kim M., Zhu, Huachen, Guan, Yi, White, Michael T., Riley, Steven

“…Multiple subtypes of avian influenza (AI) and novel reassortants are frequently isolated from live bird markets (LBMs). However, our understanding of the…”
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Butyrate Protects against SARS-CoV-2-Induced Tissue Damage in Golden Hamsters by Yu, Huan, Yuan, Lunzhi, Yan, Zhigang, Zhou, Ming, Ye, Jianghui, Wu, Kun, Chen, Wenjia, Chen, Rirong, Xia, Ningshao, Guan, Yi, Zhu, Huachen

“…Butyrate, produced by gut microbe during dietary fiber fermentation, has anti-inflammatory and antioxidant effects on chronic inflammation diseases, yet it…”
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Female sex hormone, progesterone, ameliorates the severity of SARS-CoV-2-caused pneumonia in the Syrian hamster model by Yuan, Lunzhi, Zhu, Huachen, Wu, Kun, Zhou, Ming, Ma, Jian, Chen, Rirong, Tang, Qiyi, Cheng, Tong, Guan, Yi, Xia, Ningshao

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Electric Field Manipulated Multilevel Magnetic States Storage in FePt/(011) PMN-PT Heterostructure by Zhao, Xiaoyu, Wen, Jiahong, Yang, Bo, Zhu, Huachen, Cao, Qingqi, Wang, Dunhui, Qian, Zhenghong, Du, Youwei

“…In the current information society, the realization of a magnetic storage technique with energy-efficient design and high storage density is greatly desirable…”
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A(H2N2) and A(H3N2) influenza pandemics elicited durable cross-reactive and protective antibodies against avian N2 neuraminidases by Liang, Zaolan, Lin, Xia, Sun, Lihong, Edwards, Kimberly M., Song, Wenjun, Sun, Hailiang, Xie, Yanmin, Lin, Fangmei, Ling, Shiman, Liang, Tingting, Xiao, Biying, Wang, Jiaqi, Li, Min, Leung, Chin-Yu, Zhu, Huachen, Bhandari, Nisha, Varadarajan, Raghavan, Levine, Min Z., Peiris, Malik, Webster, Robert, Dhanasekaran, Vijaykrishna, Leung, Nancy H. L., Cowling, Benjamin J., Webby, Richard J., Ducatez, Mariette, Zanin, Mark, Wong, Sook-San

“…Human cases of avian influenza virus (AIV) infections are associated with an age-specific disease burden. As the influenza virus N2 neuraminidase (NA) gene was…”
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Mammalian adaptation of influenza A(H7N9) virus is limited by a narrow genetic bottleneck by Zaraket, Hassan, Baranovich, Tatiana, Kaplan, Bryan S., Carter, Robert, Song, Min-Suk, Paulson, James C., Rehg, Jerold E., Bahl, Justin, Crumpton, Jeri C., Seiler, Jon, Edmonson, Michael, Wu, Gang, Karlsson, Erik, Fabrizio, Thomas, Zhu, Huachen, Guan, Yi, Husain, Matloob, Schultz-Cherry, Stacey, Krauss, Scott, McBride, Ryan, Webster, Robert G., Govorkova, Elena A., Zhang, Jinghui, Russell, Charles J., Webby, Richard J.

“…Human infection with avian influenza A(H7N9) virus is associated mainly with the exposure to infected poultry. The factors that allow interspecies transmission…”
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