Search Results - "Zhou, Carol E."

Combining multiple functional annotation tools increases coverage of metabolic annotation by Griesemer, Marc, Kimbrel, Jeffrey A, Zhou, Carol E, Navid, Ali, D'haeseleer, Patrik

“…Genome-scale metabolic modeling is a cornerstone of systems biology analysis of microbial organisms and communities, yet these genome-scale modeling efforts…”
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Prospects for Fungal Bioremediation of Acidic Radioactive Waste Sites: Characterization and Genome Sequence of Rhodotorula taiwanensis MD1149 by Tkavc, Rok, Matrosova, Vera Y, Grichenko, Olga E, Gostinčar, Cene, Volpe, Robert P, Klimenkova, Polina, Gaidamakova, Elena K, Zhou, Carol E, Stewart, Benjamin J, Lyman, Mathew G, Malfatti, Stephanie A, Rubinfeld, Bonnee, Courtot, Melanie, Singh, Jatinder, Dalgard, Clifton L, Hamilton, Theron, Frey, Kenneth G, Gunde-Cimerman, Nina, Dugan, Lawrence, Daly, Michael J

“…Highly concentrated radionuclide waste produced during the Cold War era is stored at US Department of Energy (DOE) production sites. This radioactive waste was…”
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Rapid countermeasure discovery against Francisella tularensis based on a metabolic network reconstruction by Chaudhury, Sidhartha, Abdulhameed, Mohamed Diwan M, Singh, Narender, Tawa, Gregory J, D'haeseleer, Patrik M, Zemla, Adam T, Navid, Ali, Zhou, Carol E, Franklin, Matthew C, Cheung, Jonah, Rudolph, Michael J, Love, James, Graf, John F, Rozak, David A, Dankmeyer, Jennifer L, Amemiya, Kei, Daefler, Simon, Wallqvist, Anders

“…In the future, we may be faced with the need to provide treatment for an emergent biological threat against which existing vaccines and drugs have limited…”
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Transcriptomic Analyses Elucidate Adaptive Differences of Closely Related Strains of Pseudomonas aeruginosa in Fuel by Gunasekera, Thusitha S, Bowen, Loryn L, Zhou, Carol E, Howard-Byerly, Susan C, Foley, William S, Striebich, Richard C, Dugan, Larry C, Ruiz, Oscar N

“…can utilize hydrocarbons, but different strains have various degrees of adaptation despite their highly conserved genome. ATCC 33988 is highly adapted to…”
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Transcriptomic analysis of the highly efficient oil-degrading bacterium Acinetobacter venetianus RAG-1 reveals genes important in dodecane uptake and utilization by Kothari, Ankita, Charrier, Marimikel, Wu, Yu-Wei, Malfatti, Stephanie, Zhou, Carol E., Singer, Steven W., Dugan, Larry, Mukhopadhyay, Aindrila

“…The hydrocarbonoclastic bacterium Acinetobacter venetianus RAG-1 has attracted substantial attention due to its powerful oil-degrading capabilities and its…”
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System To Assess Genome Sequencing Needs for Viral Protein Diagnostics and Therapeutics by Gardner, Shea N, Kuczmarski, Thomas A, Zhou, Carol E, Lam, Marisa W, Slezak, Tom R

“…Computational analyses of genome sequences may elucidate protein signatures unique to a target pathogen. We constructed a Protein Signature Pipeline to guide…”
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Combining multiple functional annotation tools increases coverage of metabolic annotation by Griesemer, Marc, Kimbrel, Jeffrey A., Zhou, Carol E., Navid, Ali, D’haeseleer, Patrik

“…Background Genome-scale metabolic modeling is a cornerstone of systems biology analysis of microbial organisms and communities, yet these genome-scale modeling…”
Get full text

Rapid Countermeasure Discovery against Francisella tularensis Based on a Metabolic Network Reconstruction. e63369 by Chaudhury, Sidhartha, Abdulhameed, Mohamed DiwanM, Singh, Narender, Tawa, Gregory J, D'haeseleer, Patrik M, Zemla, Adam T, Navid, Ali, Zhou, Carol E, Franklin, Matthew C, Cheung, Jonah

“…In the future, we may be faced with the need to provide treatment for an emergent biological threat against which existing vaccines and drugs have limited…”
Get full text