Search Results - "Zahedi, René Peiman"

Systematic and quantitative comparison of digest efficiency and specificity reveals the impact of trypsin quality on MS-based proteomics by Burkhart, Julia Maria, Schumbrutzki, Cornelia, Wortelkamp, Stefanie, Sickmann, Albert, Zahedi, René Peiman

“…Trypsin is the most frequently used proteolytic enzyme in mass spectrometry-based proteomics. Beside its good availability, it also offers some major…”
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Highly Sensitive Phosphoproteomics by Tailoring Solid-Phase Extraction to Electrostatic Repulsion-Hydrophilic Interaction Chromatography by Loroch, Stefan, Zahedi, René Peiman, Sickmann, Albert

“…In the past decade, several strategies for comprehensive phosphoproteome analysis have been introduced. Most of them combine different phosphopeptide…”
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Catch me if you can: Mass spectrometry-based phosphoproteomics and quantification strategies by Eyrich, Beate, Sickmann, Albert, Zahedi, René Peiman

“…Phosphorylation of proteins is one of the most prominent PTMs and for instance a key regulator of signal transduction. In order to improve our understanding of…”
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Multidimensional electrostatic repulsion–hydrophilic interaction chromatography (ERLIC) for quantitative analysis of the proteome and phosphoproteome in clinical and biomedical research by Loroch, Stefan, Schommartz, Tim, Brune, Wolfram, Zahedi, René Peiman, Sickmann, Albert

“…Quantitative proteomics and phosphoproteomics have become key disciplines in understanding cellular processes. Fundamental research can be done using cell…”
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Differential proteomic comparison of breast cancer secretome using a quantitative paired analysis workflow by Brunoro, Giselle Villa Flor, Carvalho, Paulo Costa, Barbosa, Valmir C, Pagnoncelli, Dante, De Moura Gallo, Claudia Vitória, Perales, Jonas, Zahedi, René Peiman, Valente, Richard Hemmi, Neves-Ferreira, Ana Gisele da Costa

“…Worldwide, breast cancer is the main cause of cancer mortality in women. Most cases originate in mammary ductal cells that produce the nipple aspirate fluid…”
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Assembly of nuclear pore complexes mediated by major vault protein by Vollmar, Friederike, Hacker, Christian, Zahedi, René-Peiman, Sickmann, Albert, Ewald, Andrea, Scheer, Ulrich, Dabauvalle, Marie-Christine

“…During interphase growth of eukaryotic cells, nuclear pore complexes (NPCs) are continuously incorporated into the intact nuclear envelope (NE) by mechanisms…”
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Biochemical and pathological changes result from mutated Caveolin-3 in muscle by González Coraspe, José Andrés, Weis, Joachim, Anderson, Mary E, Münchberg, Ute, Lorenz, Kristina, Buchkremer, Stephan, Carr, Stephanie, Zahedi, René Peiman, Brauers, Eva, Michels, Hannah, Sunada, Yoshihide, Lochmüller, Hanns, Campbell, Kevin P, Freier, Erik, Hathazi, Denisa, Roos, Andreas

“…Caveolin-3 (CAV3) is a muscle-specific protein localized to the sarcolemma. It was suggested that CAV3 is involved in the connection between the extracellular…”
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Two-dimensional benzyldimethyl-n-hexadecylammonium chloride/SDS-PAGE for membrane proteomics by Zahedi, René-Peiman, Meisinger, Chris, Sickmann, Albert

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Revealing phosphoproteins playing role in tobacco pollen activated in vitro by Fíla, Jan, Matros, Andrea, Radau, Sonja, Zahedi, René Peiman, Čapková, Věra, Mock, Hans-Peter, Honys, David

“…The transition between the quiescent mature and the metabolically active germinating pollen grain most probably involves changes in protein phosphorylation…”
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Simultaneous Metabolite, Protein, Lipid Extraction (SIMPLEX): A Combinatorial Multimolecular Omics Approach for Systems Biology by Coman, Cristina, Solari, Fiorella Andrea, Hentschel, Andreas, Sickmann, Albert, Zahedi, René Peiman, Ahrends, Robert

“…Interconnected molecular networks are at the heart of signaling pathways that mediate adaptive plasticity of eukaryotic cells. To gain deeper insights into the…”
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Comprehensive Mutational Analysis Reveals p6Gag Phosphorylation To Be Dispensable for HIV-1 Morphogenesis and Replication by Radestock, Benjamin, Morales, Ivonne, Rahman, Sheikh Abdul, Radau, Sonja, Glass, Bärbel, Zahedi, René Peiman, Müller, Barbara, Kräusslich, Hans-Georg

“…Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Two‐dimensional benzyldimethyl‐n‐hexadecylammonium chloride/SDS‐PAGE for membrane proteomics by Zahedi, René‐Peiman, Meisinger, Chris, Sickmann, Albert

“…Despite the importance of membranes in any living system, the global analysis of membrane subproteomes is still a common obstacle. In particular, the widely…”
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The mTOR and PP2A Pathways Regulate PHD2 Phosphorylation to Fine-Tune HIF1α Levels and Colorectal Cancer Cell Survival under Hypoxia by Di Conza, Giusy, Trusso Cafarello, Sarah, Loroch, Stefan, Mennerich, Daniela, Deschoemaeker, Sofie, Di Matteo, Mario, Ehling, Manuel, Gevaert, Kris, Prenen, Hans, Zahedi, Rene Peiman, Sickmann, Albert, Kietzmann, Thomas, Moretti, Fabiola, Mazzone, Massimiliano

“…Oxygen-dependent HIF1α hydroxylation and degradation are strictly controlled by PHD2. In hypoxia, HIF1α partly escapes degradation because of low oxygen…”
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Phosphoproteomics Profiling of Tobacco Mature Pollen and Pollen Activated in vitro by Fíla, Jan, Radau, Sonja, Matros, Andrea, Hartmann, Anja, Scholz, Uwe, Feciková, Jana, Mock, Hans-Peter, Čapková, Věra, Zahedi, René Peiman, Honys, David

“…Tobacco mature pollen has extremely desiccated cytoplasm, and is metabolically quiescent. Upon re-hydration it becomes metabolically active and that results in…”
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Myopathy in Marinesco–Sjögren syndrome links endoplasmic reticulum chaperone dysfunction to nuclear envelope pathology by Roos, Andreas, Buchkremer, Stephan, Kollipara, Laxmikanth, Labisch, Thomas, Gatz, Christian, Zitzelsberger, Manuela, Brauers, Eva, Nolte, Kay, Schröder, J. Michael, Kirschner, Janbernd, Jesse, Christopher Marvin, Goebel, Hans Hilmar, Goswami, Anand, Zimmermann, Richard, Zahedi, René Peiman, Senderek, Jan, Weis, Joachim

“…Marinesco–Sjögren syndrome (MSS) features cerebellar ataxia, mental retardation, cataracts, and progressive vacuolar myopathy with peculiar myonuclear…”
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Recent advances in yeast organelle and membrane proteomics by Premsler, Thomas, Zahedi, René Peiman, Lewandrowski, Urs, Sickmann, Albert

“…Yeast proteome research comprises two different aspects: with respect to systemic fungal infections (fungemias), invasive candidiasis, for instance by Candida…”
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Nuclear envelopes from amphibian oocytes — from morphology to protein inventory by Scheer, Ulrich, Dabauvalle, Marie-Christine, Krohne, Georg, Peiman Zahedi, René, Sickmann, Albert

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good, the bad, the ugly: Validating the mass spectrometric analysis of modified peptides by Beck, Florian, Lewandrowski, Urs, Wiltfang, Matthias, Feldmann, Ingo, Geiger, Jörg, Sickmann, Albert, Zahedi, René Peiman

“…Mass spectrometric characterization of protein modifications is usually based on single peptides. With the advent of large-scale PTM-focussed MS studies, vast…”
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The Human Platelet Membrane Proteome Reveals Several New Potential Membrane Proteins by Moebius, Jan, Zahedi, René Peiman, Lewandrowski, Urs, Berger, Claudia, Walter, Ulrich, Sickmann, Albert

“…We present the first focused proteome study on human platelet membranes. Due to the removal of highly abundant cytoskeletal proteins a wide spectrum of known…”
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Comprehensive Mutational Analysis Reveals p6 Gag Phosphorylation To Be Dispensable for HIV-1 Morphogenesis and Replication by Radestock, Benjamin, Morales, Ivonne, Rahman, Sheikh Abdul, Radau, Sonja, Glass, Bärbel, Zahedi, René Peiman, Müller, Barbara, Kräusslich, Hans-Georg

“…The structural polyprotein Gag of human immunodeficiency virus type 1 (HIV-1) is necessary and sufficient for formation of virus-like particles. Its C-terminal…”
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