Search Results - "ZIARSOLO, Peio"
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Exploiting the diversity of tomato: the development of a phenotypically and genetically detailed germplasm collection
Published in Horticulture research (01-05-2020)“…A collection of 163 accessions, including Solanum pimpinellifolium , Solanum lycopersicum var. cerasiforme and Solanum lycopersicum var. lycopersicum , was…”
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K-seq, an affordable, reliable, and open Klenow NGS-based genotyping technology
Published in Plant methods (25-03-2021)“…K-seq, a new genotyping methodology based on the amplification of genomic regions using two steps of Klenow amplification with short oligonucleotides, followed…”
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A consensus linkage map for molecular markers and quantitative trait loci associated with economically important traits in melon (Cucumis melo L.)
Published in BMC plant biology (28-07-2011)“…A number of molecular marker linkage maps have been developed for melon (Cucumis melo L.) over the last two decades. However, these maps were constructed using…”
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ngs_backbone: a pipeline for read cleaning, mapping and SNP calling using next generation sequence
Published in BMC genomics (02-06-2011)“…The possibilities offered by next generation sequencing (NGS) platforms are revolutionizing biotechnological laboratories. Moreover, the combination of NGS…”
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GoldenBraid 2.0: A Comprehensive DNA Assembly Framework for Plant Synthetic Biology
Published in Plant physiology (Bethesda) (01-07-2013)“…Plant synthetic biology aims to apply engineering principles to plant genetic design. One strategic requirement of plant synthetic biology is the adoption of…”
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GB3.0: a platform for plant bio-design that connects functional DNA elements with associated biological data
Published in Nucleic acids research (28-02-2017)“…Modular DNA assembly simplifies multigene engineering in Plant Synthetic Biology. Furthermore, the recent adoption of a common syntax to facilitate the…”
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De novo assembly of the zucchini genome reveals a whole‐genome duplication associated with the origin of the Cucurbita genus
Published in Plant biotechnology journal (01-06-2018)“…Summary The Cucurbita genus (squashes, pumpkins and gourds) includes important domesticated species such as C. pepo, C. maxima and C. moschata. In this study,…”
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Quantitative genetic analysis of floral traits shows current limits but potential evolution in the wild
Published in Proceedings of the Royal Society. B, Biological sciences (26-04-2023)“…The vast variation in floral traits across angiosperms is often interpreted as the result of adaptation to pollinators. However, studies in wild populations…”
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European traditional tomatoes galore: a result of farmers’ selection of a few diversity-rich loci
Published in Journal of experimental botany (02-06-2022)“…The high phenotypic diversity observed among European traditional tomato varieties was created by traditional farmer-driven selection by inadvertently…”
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Haplotype analyses reveal novel insights into tomato history and domestication driven by long-distance migrations and latitudinal adaptations
Published in Horticulture research (19-02-2022)“…A novel haplotype-based approach that uses Procrustes analysis and automatic classification was used to provide further insights into tomato history and…”
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Discovery of a Major QTL Controlling Trichome IV Density in Tomato Using K-Seq Genotyping
Published in Genes (08-02-2021)“…Trichomes are a common morphological defense against pests, in particular, type IV glandular trichomes have been associated with resistance against different…”
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GoldenBraid 2.0: A Comprehensive DNA Assembly Framework for Plant Synthetic Biology
Published in Plant physiology (Bethesda) (01-07-2013)Get full text
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Atlas of phenotypic, genotypic and geographical diversity present in the European traditional tomato
Published in Horticulture research (05-01-2022)“…The Mediterranean basin countries are considered secondary centres of tomato diversification. However, information on phenotypic and allelic variation of local…”
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Analysis of the coding-complete genomic sequence of groundnut ringspot virus suggests a common ancestor with tomato chlorotic spot virus
Published in Archives of virology (01-08-2016)“…Groundnut ringspot virus (GRSV) and tomato chlorotic spot virus (TCSV) share biological and serological properties, so their identification is carried out by…”
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GoldenBraid 2.0: A Comprehensive DNA Assembly Framework for Plant Synthetic Biology1[C][W][OA]
Published in Plant physiology (Bethesda) (13-05-2013)“…GoldenBraid 2.0 is a comprehensive technological framework that facilitates the construction of increasingly complex multigene structures and exchange of…”
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Software-assisted stacking of gene modules using GoldenBraid 2.0 DNA-assembly framework
Published in Methods in molecular biology (Clifton, N.J.) (01-01-2015)“…GoldenBraid (GB) is a modular DNA assembly technology for plant multigene engineering based on type IIS restriction enzymes. GB speeds up the assembly of…”
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