Search Results - "Yu, Tommy"

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  1. 1

    Climate and Developmental Plasticity: Interannual Variability in Grapevine Leaf Morphology by Chitwood, Daniel H., Rundell, Susan M., Li, Darren Y., Woodford, Quaneisha L., Yu, Tommy T., Lopez, Jose R., Greenblatt, Daniel, Kang, Julie, Londo, Jason P.

    Published in Plant physiology (Bethesda) (01-03-2016)
    “…The shapes of leaves are dynamic, changing over evolutionary time between species, within a single plant producing different shaped leaves at successive nodes,…”
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    Journal Article
  2. 2

    Development of Subcutaneous Panniculitis-Like T-cell Lymphoma After Immune Checkpoint Inhibitor Treatment by Yu, Tommy Y, Gul, Zartash, Hunt, Alicia M, Williams, Michael J, Maley, Alexander M

    Published in Curēus (Palo Alto, CA) (15-08-2024)
    “…Program death 1 (PD-1) inhibitors such as nivolumab are immune checkpoint inhibitors that have revolutionized the treatment of metastatic melanoma. Despite its…”
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    Journal Article
  3. 3

    The Physiome Model Repository 2 by YU, Tommy, LLOYD, Catherine M, NIELSEN, Poul M. F, NICKERSON, David P, COOLING, Michael T, MILLET, Andrew K, GARNY, Alan, TERKILDSEN, Jonna R, LAWSON, James, BRITTEN, Randall D, HUNTER, Peter J

    Published in Bioinformatics (Oxford, England) (01-03-2011)
    “…The Physiome Model Repository 2 (PMR2) software was created as part of the IUPS Physiome Project (Hunter and Borg, 2003), and today it serves as the foundation…”
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    Journal Article
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    Implementing an osteoarthritis management program to deliver guideline-driven care for knee and hip osteoarthritis in a U.S. academic health system by Miller, Kathryn A., Baier Manwell, Linda M., Bartels, Christie M., Yu, Tommy Yue, Vundamati, Divya, Foertsch, Marley, Brown, Roger L.

    Published in Osteoarthritis and cartilage open (01-06-2024)
    “…Assess implementation feasibility and outcomes for an Osteoarthritis Management Program (OAMP) at an academic center. This open study assessed an OAMP designed…”
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    Journal Article
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    Prevalence of Antibiotic Allergy at a Spinal Cord Injury Center by Yu, Tommy C, Cunneen, John

    Published in Federal practitioner (01-05-2023)
    “…BackgroundInfectious diseases are the most common reason for rehospitalization in patients with spinal cord injury (SCI). Persons with SCI are at high risk for…”
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    Journal Article
  10. 10

    Prevalence and Predictors of Lower Limb Amputation in the Spinal Cord Injury Population by Yu, Tommy C, Pyne, Morgan, Higdon, Brian, Rotman, Robert, Mhaskar, Rahul

    Published in Federal practitioner (01-04-2022)
    “…BackgroundDespite limited data demonstrating altered hemodynamics in the lower extremities (LEs) among the population with spinal cord injury (SCI) and…”
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    Journal Article
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    Revision history aware repositories of computational models of biological systems by Miller, Andrew K, Yu, Tommy, Britten, Randall, Cooling, Mike T, Lawson, James, Cowan, Dougal, Garny, Alan, Halstead, Matt D B, Hunter, Peter J, Nickerson, David P, Nunns, Geo, Wimalaratne, Sarala M, Nielsen, Poul M F

    Published in BMC bioinformatics (14-01-2011)
    “…Building repositories of computational models of biological systems ensures that published models are available for both education and further research, and…”
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    Physiome: Encouraging Reproducible and FAIR Computational Modelling by Nickerson, David Phillip, Lundengård, Karin, Watts, Jared, Porter, Simon, Yu, Tommy, Nielsen, Poul, Hunter, Peter

    Published in The FASEB journal (01-04-2020)
    “…Abstract only Computational modelling is a commonly used tool in the physiological sciences. For these models to be useful, it is essential that the model is…”
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    Investigating Hypotheses through Discovery of Relevant Models of Epithelial Transport by Sarwar, Dewan, Yu, Tommy, Atalag, Koray, Carlson, Brian, Gennari, John, Hunter, Peter J., Neal, Maxwell, Nickerson, David P.

    Published in The FASEB journal (01-04-2018)
    “…Scientists often utilize computational models to help understand experimental observations or to investigate hypotheses in ways that are not practically…”
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    Distributed model construction with virtual parts by Cooling, Michael T, Yu, Tommy

    “…Here three models for a simple genetic device are constructed using modular mathematical models. The models are stored in an online system (the Physiome Model…”
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    Journal Article
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    Climate and Developmental Plasticity: Interannual Variability in Grapevine Leaf Morphology1[OPEN] by Chitwood, Daniel H., Rundell, Susan M., Li, Darren Y., Woodford, Quaneisha L., Yu, Tommy T., Lopez, Jose R., Greenblatt, Daniel, Kang, Julie, Londo, Jason P.

    Published in Plant physiology (Bethesda) (29-01-2016)
    “…Changes in climate alter specific shape features of grapevine leaves, regardless of evolutionary or developmental context. The shapes of leaves are dynamic,…”
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    Journal Article
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    Model annotation for synthetic biology: automating model to nucleotide sequence conversion by MISIRLI, Goksel, HALLINAN, Jennifer S, YU, Tommy, LAWSON, James R, WIMALARATNE, Sarala M, COOLING, Michael T, WIPAT, Anil

    Published in Bioinformatics (01-04-2011)
    “…The need for the automated computational design of genetic circuits is becoming increasingly apparent with the advent of ever more complex and ambitious…”
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    FieldML, a proposed open standard for the Physiome project for mathematical model representation by Britten, Randall D., Christie, G. Richard, Little, Caton, Miller, Andrew K., Bradley, Chris, Wu, Alan, Yu, Tommy, Hunter, Peter, Nielsen, Poul

    “…The FieldML project has made significant progress towards the goal of addressing the need to have open standards and open source software for representing…”
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