Search Results - "Young, Robert T."

Designed architectural proteins that tune DNA looping in bacteria by Tse, David H, Becker, Nicole A, Young, Robert T, Olson, Wilma K, Peters, Justin P, Schwab, Tanya L, Clark, Karl J, Maher, L James

“…Architectural proteins alter the shape of DNA. Some distort the double helix by introducing sharp kinks. This can serve to relieve strain in tightly-bent DNA…”
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Revisiting DNA Sequence-Dependent Deformability in High-Resolution Structures: Effects of Flanking Base Pairs on Dinucleotide Morphology and Global Chain Configuration by Young, Robert T, Czapla, Luke, Wefers, Zoe O, Cohen, Benjamin M, Olson, Wilma K

“…DNA carries more than the list of biochemical ingredients that drive the basic functions of living systems. The sequence of base pairs includes a multitude of…”
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SEDIMENT PERMEABILITY AND THE PRESERVATION OF SOFT-TISSUES IN CONCRETIONS: AN EXPERIMENTAL STUDY by MCCOY, VICTORIA E, YOUNG, ROBERT T, BRIGGS, DEREK E.G

“…Sediment permeability is hypothesized to affect soft tissue fossilization within concretions through its effects on organic decay and concretion growth. The…”
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Optimizing Binding among Bimolecular Tethered Complexes by Pekar, Kyle, Young, Robert T., Sensale, Sebastian

“…Tethered motion is ubiquitous in nature, offering controlled movement and spatial constraints to otherwise chaotic systems. The enhanced functionality and…”
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A mean-field theory for characterizing the closing rates of DNA origami hinges by Yeboah, Isaac O, Young, Robert T, Mosioma, Mark, Sensale, Sebastian

“…The evolution of dynamic DNA nanostructures has propelled DNA nanotechnology into a robust and versatile field, offering groundbreaking applications in…”
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emDNA – A Tool for Modeling Protein-decorated DNA Loops and Minicircles at the Base-pair Step Level by Young, Robert T., Clauvelin, Nicolas, Olson, Wilma K.

“…[Display omitted] •emDNA is a command-line program that produces elastically-optimized 3D models of DNA fragments hundreds of base pairs long.•Users can…”
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DNA simulation benchmarks revealed with the accumulation of high-resolution structures by Olson, Wilma K., Young, Robert T., Czapla, Luke

“…DNA carries more than the list of biochemical instructions that drive the basic functions of living systems. The sequence of base pairs includes a multitude of…”
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Surprising Twists in Nucleosomal DNA with Implication for Higher-order Folding by Todolli, Stefjord, Young, Robert T., Watkins, Abigail S., Bu Sha, Antonio, Yager, John, Olson, Wilma K.

“…[Display omitted] •Analysis of currently available high-resolution nucleosome structures.•Nucleosomal DNA is undertwisted as well as overtwisted.•Differences…”
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The Albany Conversations Are Now the Next Generation Conversations: Albany @ Ruston by Bishop, Thomas C., Thayer, Kelly M., Young, Robert T.

“…This commentary is a report on the 1st Next Gen. Conversation: Albany @ Ruston 2024 held on the campus of Louisiana Tech University June 11–15, 2024. The 2nd…”
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FACTORS CONTROLLING EXCEPTIONAL PRESERVATION IN CONCRETIONS by MCCOY, VICTORIA E, YOUNG, ROBERT T, BRIGGS, DEREK E.G

“…Concretions are an important source of soft-bodied fossils. In order to determine the controls on exceptional fossilization within concretions, we scored 88…”
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The influence of nucleosomal torsion on the structural properties of closed DNA minichromosomes by Young, Robert T., Olson, Wilma K.

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Global Structural Deformations Observed through Optimization Calculations of Smoothly Bent and Mini-Kinked Closed DNA by Young, Robert T., Olson, Wilma

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Exploration of Configurational and Topological Properties of Minichromosomes using Elastic Energy Optimizations at the DNA Base-Pair Level by Young, Robert T., Olson, Wilma K.

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Effect of Tetrameric Base-Pair Context on the Sequence-Dependent Configurations of DNA Minicircles by Young, Robert T., Cohen, Benjamin, Czapla, Luke, Perez, Pamela J., Olson, Wilma K.

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Structural Variation in Circular DNA Influenced by Nucleotide Sequence and Rotational Rigid Body Parameters by Young, Robert T

“…The physical configuration of double-stranded DNA plays a significant role in the protection and expression of genetic material. Studies of biologically…”
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The Twists & Turns of DNA: The Importance of DNA Deformability and Local Features that Influence Genomic Structure and Function by Young, Robert T

“…The organization of DNA is essential to genetic protection and access and is highly dependent on factors that can cause bending, stretching, and torsional…”
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Investigating the characteristics of collagen in protein-protein interactions through NMR relaxation experiments and indirect elisa binding assays by Young, Robert T

“…Triple helical collagen in the most abundant protein found in the human body. It is made of three right-handed polyproline chains that supercoil together with…”
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Diurnal variation in fecal concentrations of acid-detergent insoluble ash and alkaline-peroxide lignin from cattle fed bermudagrass hays of varying nutrient content by Kanani, Juvenal, Philipp, Dirk, Coffey, Kenneth P, Kegley, Elizabeth B, West, Charles P, Gadberry, Shane, Jennings, John, Young, Ashley N, Rhein, Robert T

“…Background： The effect of time of fecal sampling on the accuracy of acid-detergent insoluble ash （ADIA） and alkaline-peroxide lignin （APL） for the prediction…”
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Comparison of acid-detergent lignin, alkaline-peroxide lignin, and acid-detergent insoluble ash as internal markers for predicting fecal output and digestibilily by caltie offered bermudagrass hays of varying nutrient composition by Juvenal Kanani Dirk Philipp Kenneth P Coffey Elizabeth B Kegley Charles P West Shane Gadberry John Jennings Ashley N Young Robert T Rhein

“…Background： The potential for acid-detergent insoluble ash （ADIA）, alkaline-peroxide lignin （APL）, and acid-detergent lignin （ADL） to predict fecal output （FO）…”
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Notes on the Mammals of Prince Edward Island by Young, Robert T.

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