Search Results - "Young, David B"
-
1
The Chronus Quantum software package
Published in Wiley interdisciplinary reviews. Computational molecular science (01-03-2020)“…The Chronus Quantum (ChronusQ) software package is an open source (under the GNU General Public License v2) software infrastructure which targets the solution…”
Get full text
Journal Article -
2
Approximate Green’s Function Coupled Cluster Method Employing Effective Dimension Reduction
Published in Journal of chemical theory and computation (14-05-2019)“…The Green’s function coupled cluster (GFCC) method, originally proposed in the early 1990s, is a powerful many-body tool for computing and analyzing the…”
Get full text
Journal Article -
3
Accurate Assignments of Excited-State Resonance Raman Spectra: A Benchmark Study Combining Experiment and Theory
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (19-10-2017)“…Femtosecond stimulated Raman scattering (FSRS) probes the structural dynamics of molecules in electronically excited states by following the evolution of the…”
Get full text
Journal Article -
4
Efficient Implementation of Variation after Projection Generalized Hartree–Fock
Published in Journal of chemical theory and computation (13-02-2018)“…Projected Hartree–Fock (PHF) theory can restore important symmetries to broken symmetry wave functions. Variation after projection (VAP) implementations make…”
Get full text
Journal Article -
5
Solving Coupled Cluster Equations by the Newton Krylov Method
Published in Frontiers in chemistry (10-12-2020)“…We describe using the Newton Krylov method to solve the coupled cluster equation. The method uses a Krylov iterative method to compute the Newton correction to…”
Get full text
Journal Article -
6
Protein Interactions Targeting the Latency-Associated Nuclear Antigen of Kaposi's Sarcoma-Associated Herpesvirus to Cell Chromosomes
Published in Journal of Virology (01-11-2002)“…Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
Get full text
Journal Article -
7
On the Efficient Evaluation of the Exchange Correlation Potential on Graphics Processing Unit Clusters
Published in Frontiers in chemistry (10-12-2020)“…The predominance of Kohn-Sham density functional theory (KS-DFT) for the theoretical treatment of large experimentally relevant systems in molecular chemistry…”
Get full text
Journal Article -
8
Real-Time Krylov Theory for Quantum Computing Algorithms
Published in Quantum (Vienna, Austria) (25-07-2023)“…Quantum computers provide new avenues to access ground and excited state properties of systems otherwise difficult to simulate on classical hardware. New…”
Get full text
Journal Article -
9
Computing the Many-Body Green’s Function with Adaptive Variational Quantum Dynamics
Published in Journal of chemical theory and computation (13-06-2023)“…We present a method to compute the many-body real-time Green’s function using an adaptive variational quantum dynamics simulation approach. The real-time…”
Get full text
Journal Article -
10
An efficient implementation of two-component relativistic density functional theory with torque-free auxiliary variables
Published in The European physical journal. B, Condensed matter physics (01-07-2018)“…An integration and assembly strategy for efficient evaluation of the exchange correlation term in relativistic density functional theory within two-component…”
Get full text
Journal Article -
11
A Novel Corepressor, BCoR-L1, Represses Transcription through an Interaction with CtBP
Published in The Journal of biological chemistry (18-05-2007)“…Corepressors play a crucial role in negative gene regulation and are defective in several diseases. BCoR is a corepressor for the BCL6 repressor protein. Here…”
Get full text
Journal Article -
12
Accelerating Relativistic Exact-Two-Component Density Functional Theory Calculations with Graphical Processing Units
Published in Journal of chemical theory and computation (03-09-2024)“…Numerical integration of the exchange–correlation potential is an inherently parallel problem that can be significantly accelerated by graphical processing…”
Get full text
Journal Article -
13
Generalized Hartree–Fock with Nonperturbative Treatment of Strong Magnetic Fields: Application to Molecular Spin Phase Transitions
Published in Journal of chemical theory and computation (08-01-2019)“…In this work, we present a framework of an ab initio variational approach to effectively explore electronic spin phase transitions in molecular systems inside…”
Get full text
Journal Article -
14
Relativistic Real-Time Time-Dependent Equation-of-Motion Coupled-Cluster
Published in Journal of chemical theory and computation (10-12-2019)“…We present a relativistic time-dependent equation-of-motion coupled-cluster with single and double excitations (TD-EOM-CCSD) formalism. Unlike other explicitly…”
Get full text
Journal Article -
15
CIR, a Corepressor Linking the DNA Binding Factor CBF1 to the Histone Deacetylase Complex
Published in Proceedings of the National Academy of Sciences - PNAS (05-01-1999)“…CBF1 is a member of the CSL family of DNA binding factors, which mediate either transcriptional repression or transcriptional activation. CSL proteins play a…”
Get full text
Journal Article -
16
Influence of Electronic Correlations on Electron–Phonon Interactions of Molecular Systems with the GW and Coupled Cluster Methods
Published in Journal of chemical theory and computation (23-07-2024)“…Electron–phonon interactions are of great importance to a variety of physical phenomena, and their accurate description is an important goal for…”
Get full text
Journal Article -
17
Using Diffusion Maps to Analyze Reaction Dynamics for a Hydrogen Combustion Benchmark Dataset
Published in Journal of chemical theory and computation (12-09-2023)“…We use local diffusion maps to assess the quality of two types of collective variables (CVs) for a recently published hydrogen combustion benchmark dataset1…”
Get full text
Journal Article -
18
Direct ab Initio (Meta-)Surface-Hopping Dynamics
Published in Journal of chemical theory and computation (08-03-2016)“…Tractable methods for studying the molecular dynamics of chemical processes driven by electronic nonadiabaticity are highly sought after to provide insight…”
Get full text
Journal Article -
19
From NWChem to NWChemEx: Evolving with the Computational Chemistry Landscape
Published in Chemical reviews (28-04-2021)“…Since the advent of the first computers, chemists have been at the forefront of using computers to understand and solve complex chemical problems. As the…”
Get full text
Journal Article -
20
Identification of Domains of Ataxia-telangiectasia Mutated Required for Nuclear Localization and Chromatin Association
Published in The Journal of biological chemistry (29-07-2005)“…Ataxia-telangiectasia mutated (ATM) is essential for rapid induction of cellular responses to DNA double strand breaks (DSBs). In this study, we mapped a…”
Get full text
Journal Article