Search Results - "Yilmaz, Safak"

Influence of heat treatments on the formability of the 6061 Al alloy sheets: experiments and GTN damage model by Yildiz, Rasid Ahmed, Yilmaz, Safak

“…The research mainly focused on the forming limit curves (FLC) of the 6061 Al alloy subjected to heat treatments with various (1 mm, 1.6 mm, 2 mm, and 2.5 mm)…”
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DECIPHER, a Search-Based Approach to Chimera Identification for 16S rRNA Sequences by Wright, Erik S, Yilmaz, L Safak, Noguera, Daniel R

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Experimental and Numerical Investigation of the Gurson–Tveergard–Needleman Model Parameters for AISI 1045 Steel by Öztekin, Vehbi, Yılmaz, Şafak

“…Herein, the determination and verification of the Gurson–Tveergard–Needleman (GTN) damage model parameters are studied. AISI 1045 steel is examined in two…”
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mathFISH, a Web Tool That Uses Thermodynamics-Based Mathematical Models for In Silico Evaluation of Oligonucleotide Probes for Fluorescence In Situ Hybridization by Yilmaz, L. Safak, Parnerkar, Shreyas, Noguera, Daniel R

“…Mathematical models of RNA-targeted fluorescence in situ hybridization (FISH) for perfectly matched and mismatched probe/target pairs are organized and…”
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Bacterial Metabolism Affects the C. elegans Response to Cancer Chemotherapeutics by García-González, Aurian P., Ritter, Ashlyn D., Shrestha, Shaleen, Andersen, Erik C., Yilmaz, L. Safak, Walhout, Albertha J.M.

“…The human microbiota greatly affects physiology and disease; however, the contribution of bacteria to the response to chemotherapeutic drugs remains poorly…”
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WormPaths: Caenorhabditis elegans metabolic pathway annotation and visualization by Walker, Melissa D, Giese, Gabrielle E, Holdorf, Amy D, Bhattacharya, Sushila, Diot, Cédric, García-González, Aurian P, Horowitz, Brent B, Lee, Yong-Uk, Leland, Thomas, Li, Xuhang, Mirza, Zeynep, Na, Huimin, Nanda, Shivani, Ponomarova, Olga, Zhang, Hefei, Zhang, Jingyan, Yilmaz, L Safak, Walhout, Albertha J M

“…Abstract In our group, we aim to understand metabolism in the nematode Caenorhabditis elegans and its relationships with gene expression, physiology, and the…”
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Worms, bacteria, and micronutrients: an elegant model of our diet by Yilmaz, Lutfu Safak, Walhout, Albertha J.M

“…Highlights • Micronutrients affect human health either directly or indirectly via gut microbiota. • Caenorhabditis elegans and its bacterial diet can be used…”
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A D-2-hydroxyglutarate dehydrogenase mutant reveals a critical role for ketone body metabolism in Caenorhabditis elegans development by Ponomarova, Olga, Zhang, Hefei, Li, Xuhang, Nanda, Shivani, Leland, Thomas B, Fox, Bennett W, Starbard, Alyxandra N, Giese, Gabrielle E, Schroeder, Frank C, Yilmaz, L Safak, Walhout, Albertha J M

“…In humans, mutations in D-2-hydroxyglutarate (D-2HG) dehydrogenase (D2HGDH) result in D-2HG accumulation, delayed development, seizures, and ataxia. While the…”
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A Caenorhabditis elegans Genome-Scale Metabolic Network Model by Yilmaz, L Safak, Walhout, Albertha J M

“…Caenorhabditis elegans is a powerful model to study metabolism and how it relates to nutrition, gene expression, and life history traits. However, while…”
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Interspecies Systems Biology Uncovers Metabolites Affecting C. elegans Gene Expression and Life History Traits by Watson, Emma, MacNeil, Lesley T., Ritter, Ashlyn D., Yilmaz, L. Safak, Rosebrock, Adam P., Caudy, Amy A., Walhout, Albertha J.M.

“…Diet greatly influences gene expression and physiology. In mammals, elucidating the effects and mechanisms of individual nutrients is challenging due to the…”
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Systems‐level transcriptional regulation of Caenorhabditis elegans metabolism by Nanda, Shivani, Jacques, Marc‐Antoine, Wang, Wen, Myers, Chad L, Yilmaz, L Safak, Walhout, Albertha JM

“…Metabolism is controlled to ensure organismal development and homeostasis. Several mechanisms regulate metabolism, including allosteric control and…”
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Quantification of Target Molecules Needed To Detect Microorganisms by Fluorescence In Situ Hybridization (FISH) and Catalyzed Reporter Deposition-FISH by Hoshino, Tatsuhiko, Yilmaz, L. Safak, Noguera, Daniel R, Daims, Holger, Wagner, Michael

“…Fluorescence in situ hybridization (FISH) with rRNA-targeted oligonucleotide probes is a method that is widely used to detect and quantify microorganisms in…”
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Structure and performance of electroblown PVDF‐based nanofibrous electret filters by Al Rai, Adel, Stojanovska, Elena, Fidan, Gizem, Yetgin, Eda, Polat, Yusuf, Kilic, Ali, Demir, Ali, Yilmaz, Safak

“…Poly(vinylidene fluoride) (PVDF)‐based nanofibrous mats were produced via electrically assisted solution blowing (electroblowing). Morphology and filtration…”
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Exploiting extension bias in polymerase chain reaction to improve primer specificity in ensembles of nearly identical DNA templates by Wright, Erik S, Yilmaz, L. Safak, Ram, Sri, Gasser, Jeremy M, Harrington, Gregory W, Noguera, Daniel R

“…We describe a semi‐empirical framework that combines thermodynamic models of primer hybridization with experimentally determined elongation biases introduced…”
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Automated design of probes for rRNA-targeted fluorescence in situ hybridization reveals the advantages of using dual probes for accurate identification by Wright, Erik S, Yilmaz, L Safak, Corcoran, Andrew M, Ökten, Hatice E, Noguera, Daniel R

“…Fluorescence in situ hybridization (FISH) is a common technique for identifying cells in their natural environment and is often used to complement…”
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Structural Characterization of Ion Nitrided 316L Austenitic Stainless Steel: Influence of Treatment Temperature and Time by Gokcekaya, Ozkan, Ergun, Celaletdin, Gulmez, Turgut, Nakano, Takayoshi, Yilmaz, Safak

“…The ion nitriding behavior of AISI 316L austenite stainless steel was investigated at different nitriding times (2 h, 4 h, and 9 h) and temperatures (450 °C,…”
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A Persistence Detector for Metabolic Network Rewiring in an Animal by Bulcha, Jote T., Giese, Gabrielle E., Ali, Md. Zulfikar, Lee, Yong-Uk, Walker, Melissa D., Holdorf, Amy D., Yilmaz, L. Safak, Brewster, Robert C., Walhout, Albertha J.M.

“…Biological systems must possess mechanisms that prevent inappropriate responses to spurious environmental inputs. Caenorhabditis elegans has two breakdown…”
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Denitrification capabilities of two biological phosphorus removal sludges dominated by different 'Candidatus Accumulibacter' clades by Flowers, Jason J., He, Shaomei, Yilmaz, Safak, Noguera, Daniel R., McMahon, Katherine D.

“…Summary The capability of ‘Candidatus Accumulibacter’ to use nitrate as an electron acceptor for phosphorus uptake was investigated using two activated sludge…”
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Youtube videos as an information source about urinary incontinence by Baran, Caner, Yilmaz Baran, Safak

“…Youtube is one of the most popular video-sharing websites, and people use Youtube as a source of information. Patients with urinary incontinence may seek…”
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Role of prophylactic and therapeutic red blood cell exchange in pregnancy with sickle cell disease: Maternal and perinatal outcomes by Yılmaz Baran, Şafak, Kozanoğlu, İlknur, Korur, Aslı, Doğan Durdağ, Gülşen, Kalaycı, Hakan, Alemdaroğlu, Songül, Asma, Süheyl, Kılıçdağ, Esra Bulgan, Boğa, Can

“…Background and Aim The incidence of fetomaternal complications during pregnancy is high for women with sickle cell disease (SCD), which is the most common…”
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