Search Results - "Yilin YE"
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Gradient Boosting Decision Tree-Based Method for Predicting Interactions Between Target Genes and Drugs
Published in Frontiers in genetics (31-05-2019)“…Determining the target genes that interact with drugs-drug-target interactions-plays an important role in drug discovery. Identification of drug-target…”
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MATHLA: a robust framework for HLA-peptide binding prediction integrating bidirectional LSTM and multiple head attention mechanism
Published in BMC bioinformatics (06-01-2021)“…Accurate prediction of binding between class I human leukocyte antigen (HLA) and neoepitope is critical for target identification within personalized T-cell…”
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Inferring Drug-Related Diseases Based on Convolutional Neural Network and Gated Recurrent Unit
Published in Molecules (Basel, Switzerland) (25-07-2019)“…Predicting novel uses for drugs using their chemical, pharmacological, and indication information contributes to minimizing costs and development periods. Most…”
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A Natural Compound Containing a Disaccharide Structure of Glucose and Rhamnose Identified as Potential N-Glycanase 1 (NGLY1) Inhibitors
Published in Molecules (Basel, Switzerland) (24-11-2023)“…N-glycanase 1 (NGLY1) is an essential enzyme involved in the deglycosylation of misfolded glycoproteins through the endoplasmic reticulum (ER)-associated…”
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Convolutional Neural Network and Bidirectional Long Short-Term Memory-Based Method for Predicting Drug-Disease Associations
Published in Cells (Basel, Switzerland) (11-07-2019)“…Identifying novel indications for approved drugs can accelerate drug development and reduce research costs. Most previous studies used shallow models for…”
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Generative AI for visualization: State of the art and future directions
Published in Visual informatics (Online) (01-06-2024)“…Generative AI (GenAI) has witnessed remarkable progress in recent years and demonstrated impressive performance in various generation tasks in different…”
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Social exclusion and psychopathologies of Chinese floating populations
Published in Journal of affective disorders reports (01-12-2021)“…•The data of “Social integration and mental Health” is based on over 15,000 respondents.•Multiple linear regression was used to discuss the impact of social…”
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Flow Characteristics of a Refrigerant-Oil Mixture in a Vapor Compression Heat Pump Heat Exchanger for Space Applications
Published in Journal of thermal science (01-04-2022)“…The vapor compression heat pump is considered as the best option for aerospace thermal control system. The heat exchanger in vapor compression heat pump is a…”
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9
Synthetic studies towards atkamine
Published in Chinese chemical letters (01-02-2021)“…The tetracyclic core structure of atkamine, a complex brominated marine pyrroloiminoquinone alkaloid, has been successfully constructed through a formal [5 +…”
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10
SIGANEO: Similarity network with GAN enhancement for immunogenic neoepitope prediction
Published in Computational and structural biotechnology journal (01-01-2023)“…Target selection of the personalized cancer neoantigen vaccine, which is highly dependent on computational prediction algorithms, is crucial for its clinical…”
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11
Proteomic characterization of endogenous substrates of mammalian ubiquitin ligase Hrd1
Published in Cell & bioscience (22-08-2018)“…Endoplasmic reticulum (ER)-associated degradation (ERAD) regulates protein homeostasis in the secretory pathway by targeting misfolded or unassembled proteins…”
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Effect of 3-mercapto-1-propane sulfonate sulfonic acid and polyvinylpyrrolidone on the growth of cobalt pillar by electrodeposition
Published in Nanotechnology reviews (Berlin) (11-03-2022)“…Cobalt is a promising material for electronic interconnections in the post-Moore law period. However, the vertical cobalt pillar is not fully compatible with…”
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13
Identification of proteins in fluid collected from nerve regeneration chambers
Published in Archives of biological sciences (2014)“…We examined whether there are novel neurotrophic factors (NTFs) in nerve regeneration conditioned fluid (NRCF). Nerve regeneration chamber models were…”
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14
VISAtlas: An Image-Based Exploration and Query System for Large Visualization Collections via Neural Image Embedding
Published in IEEE transactions on visualization and computer graphics (01-07-2024)“…High-quality visualization collections are beneficial for a variety of applications including visualization reference and data-driven visualization design. The…”
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15
Graph Convolutional Autoencoder and Generative Adversarial Network-Based Method for Predicting Drug-Target Interactions
Published in IEEE/ACM transactions on computational biology and bioinformatics (01-01-2022)“…The computational prediction of novel drug-target interactions (DTIs) may effectively speed up the process of drug repositioning and reduce its costs. Most…”
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Let the Chart Spark: Embedding Semantic Context into Chart with Text-to-Image Generative Model
Published in IEEE transactions on visualization and computer graphics (01-01-2024)“…Pictorial visualization seamlessly integrates data and semantic context into visual representation, conveying complex information in an engaging and…”
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Comparison of the mixed flow and heat transfer characteristics in the evaporator of a vapor compression heat pump in normal gravity and microgravity
Published in International journal of heat and mass transfer (01-06-2021)“…•A mixed flow and heat transfer model of the refrigerant and lubricating oil is established.•The gas volume, temperature, velocity and pressure distributions…”
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Advancing Multimodal Large Language Models in Chart Question Answering with Visualization-Referenced Instruction Tuning
Published in IEEE transactions on visualization and computer graphics (10-09-2024)“…Emerging multimodal large language models (MLLMs) exhibit great potential for chart question answering (CQA). Recent efforts primarily focus on scaling up…”
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ModalChorus: Visual Probing and Alignment of Multi-modal Embeddings via Modal Fusion Map
Published in IEEE transactions on visualization and computer graphics (09-09-2024)“…Multi-modal embeddings form the foundation for vision-language models, such as CLIP embeddings, the most widely used text-image embeddings. However, these…”
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Simulation of refrigerant-lubricant two-phase flow characteristics and performance test in space compressor
Published in Applied thermal engineering (01-04-2023)“…•A new microgravity solution is proposed for space compressors.•A compression chamber model that enables rotational motion of the rotor was built.•Flow…”
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