Search Results - "Yeung, Jake"
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Oscillating and stable genome topologies underlie hepatic physiological rhythms during the circadian cycle
Published in PLoS genetics (01-02-2021)“…The circadian clock drives extensive temporal gene expression programs controlling daily changes in behavior and physiology. In mouse liver, transcription…”
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Sleep–wake-driven and circadian contributions to daily rhythms in gene expression and chromatin accessibility in the murine cortex
Published in Proceedings of the National Academy of Sciences - PNAS (17-12-2019)“…The timing and duration of sleep results from the interaction between a homeostatic sleep–wake-driven process and a periodic circadian process, and involves…”
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Cross-regulatory circuits linking inflammation, high-fat diet, and the circadian clock
Published in Genes & development (01-11-2018)“…Mammalian physiology resonates with the daily changes in the external environment, allowing processes such as rest-activity cycles, metabolism, and body…”
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Transcription factor activity rhythms and tissue-specific chromatin interactions explain circadian gene expression across organs
Published in Genome research (01-02-2018)“…Temporal control of physiology requires the interplay between gene networks involved in daily timekeeping and tissue function across different organs. How the…”
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Clock-dependent chromatin topology modulates circadian transcription and behavior
Published in Genes & development (01-03-2018)“…The circadian clock in animals orchestrates widespread oscillatory gene expression programs, which underlie 24-h rhythms in behavior and physiology. Several…”
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Circadian clock-dependent and -independent posttranscriptional regulation underlies temporal mRNA accumulation in mouse liver
Published in Proceedings of the National Academy of Sciences - PNAS (20-02-2018)“…The mammalian circadian clock coordinates physiology with environmental cycles through the regulation of daily oscillations of gene expression. Thousands of…”
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The circadian oscillator analysed at the single‐transcript level
Published in Molecular systems biology (01-03-2021)“…The circadian clock is an endogenous and self‐sustained oscillator that anticipates daily environmental cycles. While rhythmic gene expression of circadian…”
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Rhythms of the Genome: Circadian Dynamics from Chromatin Topology, Tissue-Specific Gene Expression, to Behavior
Published in Trends in genetics (01-12-2018)“…Circadian rhythms in physiology and behavior evolved to resonate with daily cycles in the external environment. In mammals, organs orchestrate temporal…”
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Systems Chronobiology: Global Analysis of Gene Regulation in a 24-Hour Periodic World
Published in Cold Spring Harbor perspectives in biology (01-03-2017)“…Mammals have evolved an internal timing system, the circadian clock, which synchronizes physiology and behavior to the daily light and dark cycles of the…”
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The Mouse Microbiome Is Required for Sex-Specific Diurnal Rhythms of Gene Expression and Metabolism
Published in Cell metabolism (05-02-2019)“…The circadian clock and associated feeding rhythms have a profound impact on metabolism and the gut microbiome. To what extent microbiota reciprocally affect…”
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scChIX-seq infers dynamic relationships between histone modifications in single cells
Published in Nature biotechnology (01-06-2023)“…Regulation of chromatin states involves the dynamic interplay between different histone modifications to control gene expression. Recent advances have enabled…”
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Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis
Published in Nature genetics (01-02-2023)“…Post-translational histone modifications modulate chromatin activity to affect gene expression. How chromatin states underlie lineage choice in single cells is…”
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Floating IVUS Technique for Accurate Placement of Aorto-Ostial Stent
Published in JACC. Cardiovascular interventions (08-07-2024)Get full text
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Single-Access Impella-Assisted Sheathless Antegrade and Retrograde Interventions of CTO: The SISARI Technique
Published in JACC. Cardiovascular interventions (08-04-2024)Get full text
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Single-Access Impella-Assisted Sheathless Antegrade and Retrograde Interventions of CTO
Published in JACC. Cardiovascular interventions (08-04-2024)Get full text
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HIT'nDRIVE: patient-specific multidriver gene prioritization for precision oncology
Published in Genome research (01-09-2017)“…Prioritizing molecular alterations that act as drivers of cancer remains a crucial bottleneck in therapeutic development. Here we introduce HIT'nDRIVE, a…”
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Heterogeneity in the inter-tumor transcriptome of high risk prostate cancer
Published in Genome biology (26-08-2014)“…Genomic analyses of hundreds of prostate tumors have defined a diverse landscape of mutations and genome rearrangements, but the transcriptomic effect of this…”
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