Search Results - "Yakubovich, Alexander"
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MesoBioNano explorer-A universal program for multiscale computer simulations of complex molecular structure and dynamics
Published in Journal of computational chemistry (15-11-2012)“…We present a multipurpose computer code MesoBioNano Explorer (MBN Explorer). The package allows to model molecular systems of varied level of complexity. In…”
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Accurate Vapor Pressure Prediction for Large Organic Molecules: Application to Materials Utilized in Organic Light-Emitting Diodes
Published in Journal of chemical theory and computation (08-09-2020)“…We present a theoretical method based on molecular dynamics (MD) simulations for the prediction of saturated vapor pressure of liquids constituting of large…”
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Tetradentate Pt(II) Phosphors: A Computational Analysis of Nonradiative Decay Rates and Luminescence Efficiency
Published in Journal of physical chemistry. C (04-06-2020)Get full text
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Biodamage via shock waves initiated by irradiation with ions
Published in Scientific reports (15-02-2013)“…Radiation damage following the ionising radiation of tissue has different scenarios and mechanisms depending on the projectiles or radiation modality. We…”
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Predicting the Operational Stability of Phosphorescent OLED Host Molecules from First Principles: A Case Study
Published in Journal of physical chemistry. C (12-10-2017)“…Low operational stability is the main limiting factor for commercialization of the blue phosphorescent organic light emitting diodes (PhOLEDs). The high energy…”
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Protecting Benzylic CH Bonds by Deuteration Doubles the Operational Lifetime of Deep‐Blue Ir‐Phenylimidazole Dopants in Phosphorescent OLEDs
Published in Advanced optical materials (01-08-2021)“…Much effort has been dedicated to increase the operational lifetime of blue phosphorescent materials in organic light‐emitting diodes (OLEDs), but the reported…”
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Computational Discovery of TTF Molecules with Deep Generative Models
Published in Frontiers in chemistry (23-12-2021)“…We present a computational workflow based on quantum chemical calculations and generative models based on deep neural networks for the discovery of novel…”
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Molecular dynamics simulations of the nanoindentation process of titanium crystal
Published in Computational materials science (01-08-2013)“…► MD simulations of nanoindentation of a Ti crystal consisting of 1,000,000atoms. ► Three different shapes of the indenter (square, conical, spherical) are…”
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Thermomechanical damage of nucleosome by the shock wave initiated by ion passing through liquid water
Published in Nuclear instruments & methods in physics research. Section B, Beam interactions with materials and atoms (15-05-2012)“…We report on the results of full-atom molecular dynamics simulations of the heat spike in the water medium caused by the propagation of the heavy ion in the…”
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Molecular Dynamics Simulation of Self-Diffusion Processes in Titanium in Bulk Material, on Grain Junctions and on Surface
Published in The journal of physical chemistry. A, Molecules, spectroscopy, kinetics, environment, & general theory (21-08-2014)“…The process of self-diffusion of titanium atoms in a bulk material, on grain junctions and on surface is explored numerically in a broad temperature range by…”
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Exploiting the quantum mechanically derived force field for functional materials simulations
Published in npj computational materials (28-09-2021)“…The computational design of functional materials relies heavily on large-scale atomistic simulations. Such simulations are often problematic for conventional…”
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Quantitative thermodynamic model for globular protein folding
Published in The European physical journal. D, Atomic, molecular, and optical physics (01-06-2014)“…We present a statistical mechanics formalism for theoretical description of the process of protein folding ↔ unfolding transition in water environment. The…”
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Micromechanics of base pair unzipping in the DNA duplex
Published in Journal of physics. Condensed matter (25-01-2012)“…All-atom molecular dynamics (MD) simulations of DNA duplex unzipping in a water environment were performed. The investigated DNA double helix consists of a…”
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Ab Initio Prediction of Vapor Pressure for Diverse Atomic Layer Deposition Precursors
Published in Journal of chemical theory and computation (23-07-2024)“…Understanding the saturated vapor pressure (P vap) is vital for evaluating atomic layer deposition (ALD) precursors, as it directly influences the ALD…”
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Stereospecificity of Alkaline Earth Metal Compounds in the Anionic Polymerization of N,N-Dimethylacrylamide
Published in Macromolecular chemistry and physics (01-05-2001)“…N,N‐Dimethylacrylamide (DMA) was polymerized with several initiators containing alkaline earth metal compounds such as dibutylmagnesium, calcium…”
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Dual Reactivity of Magnesium Compounds as Initiators for Anionic and Cationic Polymerization
Published in Macromolecular symposia. (01-08-2004)“…Organomagnesium compounds are well known initiators of anionic polymerization of polar monomers. However, we have found recently that in the presence of…”
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Study on the mechanism of anionic polymerization with mixed RLi-R′OK initiators, 2. Theoretical study of random styrene-butadiene copolymerization
Published in Macromolecular chemistry and physics (01-11-2000)“…Styrene‐butadiene copolymerization using mixed RLi‐R′OK initiators was modelled on the basis of a traditional two‐state scheme which supposes separate…”
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Copolymerization of N,N-Dimethylacrylamide with Styrene and Butadiene: The First Example of Polar Growing Chain End/Nonpolar Monomer Cross-Initiation
Published in Macromolecular rapid communications. (01-10-2001)“…Living potassium poly(N,N‐dimethylacrylamide) initiates the polymerization of styrene and butadiene, and adds 1,1‐diphenylethylene in THF solution. The model…”
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Anionic Polymerization of Butadiene Initiated by Tributyltin Sodium. Kinetic Analysis of Induction Periods Generated by Transfer to Initiator Precursor
Published in Macromolecular chemistry and physics (01-12-2001)“…The kinetics of anionic polymerization of butadiene initiated by a new bimetallic initiator, tributyltin sodium, was studied. The mechanism was found to depend…”
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Kinetics of liquid-solid phase transition in large nickel clusters
Published in Physical review. B, Condensed matter and materials physics (23-07-2013)Get full text
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