Search Results - "Xu, Anlong"

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  1. 1

    HaploMerger2: rebuilding both haploid sub-assemblies from high-heterozygosity diploid genome assembly by Huang, Shengfeng, Kang, Mingjing, Xu, Anlong

    Published in Bioinformatics (Oxford, England) (15-08-2017)
    “…De novo assembly is a difficult issue for heterozygous diploid genomes. The advent of high-throughput short-read and long-read sequencing technologies provides…”
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  2. 2

    Generation of hepatobiliary organoids from human induced pluripotent stem cells by Wu, Fenfang, Wu, Di, Ren, Yong, Huang, Yuhua, Feng, Bo, Zhao, Nan, Zhang, Taotao, Chen, Xiaoni, Chen, Shangwu, Xu, Anlong

    Published in Journal of hepatology (01-06-2019)
    “…[Display omitted] •We established a system to generate hiPSC-derived hepatobiliary organoids in vitro.•To varying degrees, this model recapitulated several key…”
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  3. 3
  4. 4

    beta-Carboline alkaloids: biochemical and pharmacological functions by Cao, Rihui, Peng, Wenlie, Wang, Zihou, Xu, Anlong

    Published in Current medicinal chemistry (01-01-2007)
    “…beta-Carboline alkaloids are a large group of natural and synthetic indole alkaloids with different degrees of aromaticity, some of which are widely…”
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    Characterization of GSDME in amphioxus provides insights into the functional evolution of GSDM-mediated pyroptosis by Wang, Xinli, Wei, Xuxia, Lu, Yan, Wang, Qinghuan, Fu, Rong, Wang, Yin, Wang, Qin, Wang, Xiangyan, Chen, Shangwu, Xu, Anlong, Yuan, Shaochun

    Published in PLoS biology (03-05-2023)
    “…Members of the gasdermin (GSDM) family are pore-forming effectors that cause membrane permeabilization and pyroptosis, a lytic proinflammatory type of cell…”
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  7. 7

    Differential genome-wide profiling of tandem 3' UTRs among human breast cancer and normal cells by high-throughput sequencing by Fu, Yonggui, Sun, Yu, Li, Yuxin, Li, Jie, Rao, Xingqiang, Chen, Chong, Xu, Anlong

    Published in Genome research (01-05-2011)
    “…Tandem 3' UTRs produced by alternative polyadenylation (APA) play an important role in gene expression by impacting mRNA stability, translation, and…”
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  8. 8

    Application and Mechanisms of Triptolide in the Treatment of Inflammatory Diseases-A Review by Yuan, Kai, Li, Xiaohong, Lu, Qingyi, Zhu, Qingqing, Jiang, Haixu, Wang, Ting, Huang, Guangrui, Xu, Anlong

    Published in Frontiers in pharmacology (06-12-2019)
    “…Bioactive compounds from medicinal plants with anti-inflammatory and immunosuppressive effects have been emerging as important sources of drugs for the…”
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  9. 9

    Intravenous transplantation of bone marrow-derived mesenchymal stem cells improved behavioral deficits and altered fecal microbiota composition of BTBR mice by Jingyi, Li, Lin, Wang, Yuan, Chen, Lingling, Zhang, Qianqian, Jiang, Anlong, Xu, Yansong, Gao

    Published in Life sciences (1973) (01-01-2024)
    “…It is recognized that autism spectrum disorder (ASD) is a highly complex neurodevelopmental disorder with communication deficits as well as multiple social…”
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  10. 10

    Andrographolide Ameliorates Rheumatoid Arthritis by Regulating the Apoptosis-NETosis Balance of Neutrophils by Li, Xiaohong, Yuan, Kai, Zhu, Qingqing, Lu, Qingyi, Jiang, Haixu, Zhu, Mengmeng, Huang, Guangrui, Xu, Anlong

    “…Rheumatoid arthritis (RA) is a chronic inflammatory disease characterized by symmetric polyarthritis with swelling and pain at synovial joints. In RA patients,…”
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  11. 11

    Cell Cycle Regulation by Alternative Polyadenylation of CCND1 by Wang, Qiong, He, Guopei, Hou, Mengmeng, Chen, Liutao, Chen, Shangwu, Xu, Anlong, Fu, Yonggui

    Published in Scientific reports (01-05-2018)
    “…Global shortening of 3′UTRs by alternative polyadenylation (APA) has been observed in cancer cells. However, the role of APA in cancer remains unknown. CCND1…”
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  12. 12

    Discovery of an Active RAG Transposon Illuminates the Origins of V(D)J Recombination by Huang, Shengfeng, Tao, Xin, Yuan, Shaochun, Zhang, Yuhang, Li, Peiyi, Beilinson, Helen A., Zhang, Ya, Yu, Wenjuan, Pontarotti, Pierre, Escriva, Hector, Le Petillon, Yann, Liu, Xiaolong, Chen, Shangwu, Schatz, David G., Xu, Anlong

    Published in Cell (30-06-2016)
    “…Co-option of RAG1 and RAG2 for antigen receptor gene assembly by V(D)J recombination was a crucial event in the evolution of jawed vertebrate adaptive…”
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  13. 13

    Triptolide inhibits the inflammatory activities of neutrophils to ameliorate chronic arthritis by Huang, Guangrui, Yuan, Kai, Zhu, Qingqing, Zhang, Shan, Lu, Qingyi, Zhu, Mengmeng, Sheng, Honghao, Yu, Ruipeng, Luo, Guangbin, Xu, Anlong

    Published in Molecular immunology (01-09-2018)
    “…•TP alleviated AA by reducing neutrophil recruitment.•TP suppressing the expression of IL-6 and TNF-α in peripheral blood of AA mice.•TP suppressed the…”
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  14. 14

    The role of alternative polyadenylation in the antiviral innate immune response by Jia, Xin, Yuan, Shaochun, Wang, Yao, Fu, Yonggui, Ge, Yong, Ge, Yutong, Lan, Xihong, Feng, Yuchao, Qiu, Feifei, Li, Peiyi, Chen, Shangwu, Xu, Anlong

    Published in Nature communications (24-02-2017)
    “…Alternative polyadenylation (APA) is an important regulatory mechanism of gene functions in many biological processes. However, the extent of 3′ UTR variation…”
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  15. 15

    Subchronic Toxicity Studies of Cortex Dictamni Extracts in Mice and Its Potential Hepatotoxicity Mechanisms in Vitro by Fan, Qiongyin, Zhao, Baosheng, Wang, Chunguo, Zhang, Jingxuan, Wu, Jinying, Wang, Ting, Xu, Anlong

    Published in Molecules (Basel, Switzerland) (28-09-2018)
    “…Cortex Dictamni is a commonly-used traditional Chinese herbal medicine for the treatment of skin inflammation, tinea, and eczema. Recently, some studies…”
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  16. 16

    A simple protocol to establish a conditionally immortalized mouse podocyte cell line by Huang, Yujiao, Geng, Jie, Wang, Mengdan, Liu, Wenbin, Hu, Haikun, Shi, Wei, Li, Mei, Huo, Guiyang, Huang, Guangrui, Xu, Anlong

    Published in Scientific reports (21-05-2024)
    “…Podocytes are specialized terminally differentiated cells in the glomerulus that are the primary target cells in many glomerular diseases. However, the current…”
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  17. 17

    Functional regulation of an ancestral RAG transposon ProtoRAG by a trans-acting factor YY1 in lancelet by Liu, Song, Yuan, Shaochun, Gao, Xiaoman, Tao, Xin, Yu, Wenjuan, Li, Xu, Chen, Shangwu, Xu, Anlong

    Published in Nature communications (09-09-2020)
    “…The discovery of ancestral RAG transposons in early deuterostomia reveals the origin of vertebrate V(D)J recombination. Here, we analyze the functional…”
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  18. 18

    Downregulation of CPSF6 leads to global mRNA 3' UTR shortening and enhanced antiviral immune responses by Ge, Yong, Huang, Jingrong, Chen, Rong, Fu, Yonggui, Ling, Tao, Ou, Xin, Rong, Xiaohui, Cheng, Youxiang, Lin, Yi, Zhou, Fengyi, Lu, Chuanjian, Yuan, Shaochun, Xu, Anlong

    Published in PLoS pathogens (01-02-2024)
    “…Alternative polyadenylation (APA) is a widespread mechanism of gene regulation that generates mRNA isoforms with alternative 3' untranslated regions (3' UTRs)…”
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  19. 19

    The gut microbiota intervenes in glucose tolerance and inflammation by regulating the biosynthesis of taurodeoxycholic acid and carnosine by Zhen, Jianhua, Zhang, Yunan, Li, Yini, Zhou, Yali, Cai, Yanan, Huang, Guangrui, Xu, Anlong

    “…This study aims to investigate the pathogenesis of hyperglycemia and its associated vasculopathy using multiomics analyses in diabetes and impaired glucose…”
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  20. 20

    HaploMerger: reconstructing allelic relationships for polymorphic diploid genome assemblies by Huang, Shengfeng, Chen, Zelin, Huang, Guangrui, Yu, Ting, Yang, Ping, Li, Jie, Fu, Yonggui, Yuan, Shaochun, Chen, Shangwu, Xu, Anlong

    Published in Genome research (01-08-2012)
    “…Whole-genome shotgun assembly has been a long-standing issue for highly polymorphic genomes, and the advent of next-generation sequencing technologies has made…”
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