Search Results - "Xie, Yeming"

Alterations in sperm DNA methylation, non-coding RNA and histone retention associate with DDT-induced epigenetic transgenerational inheritance of disease by Skinner, Michael K, Ben Maamar, Millissia, Sadler-Riggleman, Ingrid, Beck, Daniel, Nilsson, Eric, McBirney, Margaux, Klukovich, Rachel, Xie, Yeming, Tang, Chong, Yan, Wei

“…Environmental toxicants such as DDT have been shown to induce the epigenetic transgenerational inheritance of disease (e.g., obesity) through the germline. The…”
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Environmental Toxicant Induced Epigenetic Transgenerational Inheritance of Prostate Pathology and Stromal-Epithelial Cell Epigenome and Transcriptome Alterations: Ancestral Origins of Prostate Disease by Klukovich, Rachel, Nilsson, Eric, Sadler-Riggleman, Ingrid, Beck, Daniel, Xie, Yeming, Yan, Wei, Skinner, Michael K.

“…Prostate diseases include prostate cancer, which is the second most common male neoplasia, and benign prostatic hyperplasia (BPH), which affects approximately…”
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Spatial chromatin accessibility sequencing resolves high-order spatial interactions of epigenomic markers by Xie, Yeming, Ruan, Fengying, Li, Yaning, Luo, Meng, Zhang, Chen, Chen, Zhichao, Xie, Zhe, Weng, Zhe, Chen, Weitian, Chen, Wenfang, Fang, Yitong, Sun, Yuxin, Guo, Mei, Wang, Juan, Xu, Shouping, Wang, Hongqi, Tang, Chong

“…As the genome is organized into a three-dimensional structure in intracellular space, epigenomic information also has a complex spatial arrangement. However,…”
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The rapidly evolving X-linked MIR-506 family fine-tunes spermatogenesis to enhance sperm competition by Wang, Zhuqing, Wang, Yue, Zhou, Tong, Chen, Sheng, Morris, Dayton, Magalhães, Rubens Daniel Miserani, Li, Musheng, Wang, Shawn, Wang, Hetan, Xie, Yeming, McSwiggin, Hayden, Oliver, Daniel, Yuan, Shuiqiao, Zheng, Huili, Mohammed, Jaaved, Lai, Eric C, McCarrey, John R, Yan, Wei

“…Despite rapid evolution across eutherian mammals, the X-linked family miRNAs are located in a region flanked by two highly conserved protein-coding genes ( and…”
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Na+/Ca2 + Exchange and Pacemaker Activity of Interstitial Cells of Cajal by Zheng, Haifeng, Drumm, Bernard T., Zhu, Mei Hong, Xie, Yeming, O’Driscoll, Kate E., Baker, Salah A., Perrino, Brian A., Koh, Sang Don, Sanders, Kenton M.

“…Interstitial cells of Cajal (ICC) are pacemaker cells that generate electrical slow waves in gastrointestinal (GI) smooth muscles. Slow waves organize basic…”
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Mfge8 attenuates human gastric antrum smooth muscle contractions by Li, Wen, Olseen, Ashley, Xie, Yeming, Alexandru, Cristina, Outland, Andrew, Herrera, Angela F., Syder, Andrew J., Wykosky, Jill, Perrino, Brian A.

“…Coordinated gastric smooth muscle contraction is critical for proper digestion and is adversely affected by a number of gastric motility disorders. In this…”
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Sequencing of methylase-accessible regions in integral circular extrachromosomal DNA reveals differences in chromatin structure by Chen, Weitian, Weng, Zhe, Xie, Zhe, Xie, Yeming, Zhang, Chen, Chen, Zhichao, Ruan, Fengying, Wang, Juan, Sun, Yuxin, Fang, Yitong, Guo, Mei, Tong, Yiqin, Li, Yaning, Tang, Chong

“…Although extrachromosomal DNA (ecDNA) has been intensively studied for several decades, the mechanisms underlying its tumorigenic effects have been revealed…”
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m6A-dependent biogenesis of circular RNAs in male germ cells by Tang, Chong, Xie, Yeming, Yu, Tian, Liu, Na, Wang, Zhuqing, Woolsey, Rebekah J., Tang, Yunge, Zhang, Xinzong, Qin, Weibing, Zhang, Ying, Song, Ge, Zheng, Weiwei, Wang, Juan, Chen, Weitian, Wei, Xiongyi, Xie, Zhe, Klukovich, Rachel, Zheng, Huili, Quilici, David R., Yan, Wei

“…The majority of circular RNAs (circRNAs) spliced from coding genes contain open reading frames (ORFs) and thus, have protein coding potential. However, it…”
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Environmental toxicant induced epigenetic transgenerational inheritance of ovarian pathology and granulosa cell epigenome and transcriptome alterations: ancestral origins of polycystic ovarian syndrome and primary ovarian insufficiency by Nilsson, Eric, Klukovich, Rachel, Sadler-Riggleman, Ingrid, Beck, Daniel, Xie, Yeming, Yan, Wei, Skinner, Michael K.

“…Two of the most prevalent ovarian diseases affecting women's fertility and health are Primary Ovarian Insufficiency (POI) and Polycystic Ovarian Syndrome…”
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Corrigendum: Na+/Ca2+ Exchange and Pacemaker Activity of Interstitial Cells of Cajal by Zheng, Haifeng, Drumm, Bernard T., Zhu, Mei Hong, Xie, Yeming, O'Driscoll, Kate E., Baker, Salah A., Perrino, Brian A., Koh, Sang Don, Sanders, Kenton M.

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A role for focal adhesion kinase in the contraction of murine gastric fundus smooth muscle evoked by cholinergic neurotransmission by Xie, Yeming, Perrino, Brian

“…Abstract only Cholinergic neurotransmission‐induced smooth muscle contraction involves the regulation of myosin light chain (LC20) phosphorylation and…”
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AASRA: an anchor alignment-based small RNA annotation pipeline by Tang, Chong, Xie, Yeming, Guo, Mei, Yan, Wei

“…Small noncoding RNAs deep sequencing (sncRNA-Seq) has become a routine for sncRNA detection and quantification. However, the software packages currently…”
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Proximity Ligation Assay of Interactions between β‐1 Integrin and Ca 2+ Sensitization Proteins During the Contractile Response of Gastric Fundus Smooth Muscles to Cholinergic Stimuli by Xie, Yeming, Perrino, Brian

“…Abstract only Contraction and relaxation of smooth muscle involves the regulation of myosin light chain (LC20) phosphorylation by myosin light chain kinase…”
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Quantitative in situ proximity ligation assays examining protein interactions and phosphorylation during smooth muscle contractions by Xie, Yeming, Perrino, Brian A.

“…Antibody-based in situ proximity ligation assays (isPLA) have the potential to study protein phosphorylation and protein interactions with spatial resolution…”
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Analyzing the Integrin Adhesome by In Situ Proximity Ligation Assay by Perrino, Brian A, Xie, Yeming, Alexandru, Cristina

“…The in situ proximity ligation assay (PLA) is capable of detecting single protein events such as protein protein-interactions and posttranslational…”
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SpermBase: A Database for Sperm-Borne RNA Contents by Schuster, Andrew, Tang, Chong, Xie, Yeming, Ortogero, Nicole, Yuan, Shuiqiao, Yan, Wei

“…Since their discovery ~three decades ago, sperm-borne RNAs, both large/small and coding/noncoding, have been reported in multiple organisms, and some have been…”
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Dnmt2-null sperm block maternal transmission of a paramutant phenotype by Yu, Tian, Xie, Yeming, Tang, Chong, Wang, Yue, Yuan, Shuiqiao, Zheng, Huili, Yan, Wei

“…Previous studies have shown that Dnmt2-null sperm block the paternal transmission (through sperm) of certain acquired traits, e.g., high-fat diet–induced…”
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Next-generation sequencing reveals differentially expressed small noncoding RNAs in uterine leiomyoma by Chuang, Tsai-Der, Xie, Yeming, Yan, Wei, Khorram, Omid

“…To determine the expression profile of small noncoding RNAs (sncRNAs) in leiomyoma, which has not been investigated to date. Laboratory-based investigation…”
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Environmental toxicant induced epigenetic transgenerational inheritance of ovarian pathology and granulosa cell epigenome and transcriptome alterations: ancestral origins of polycystic ovarian syndrome and primary ovarian insufiency by Nilsson, Eric, Klukovich, Rachel, Sadler-Riggleman, Ingrid, Beck, Daniel, Xie, Yeming, Yan, Wei, Skinner, Michael K

“…Two of the most prevalent ovarian diseases affecting women's fertility and health are Primary Ovarian Insufficiency (POI) and Polycystic Ovarian Syndrome…”
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Improving the RNA velocity approach with single-cell RNA lifecycle (nascent, mature and degrading RNAs) sequencing technologies by Zhang, Chen, Fang, Yitong, Chen, Weitian, Chen, Zhichao, Zhang, Ying, Xie, Yeming, Chen, Wenfang, Xie, Zhe, Guo, Mei, Wang, Juan, Tan, Chen, Wang, Hongqi, Tang, Chong

“…Abstract We presented an experimental method called FLOUR-seq, which combines BD Rhapsody and nanopore sequencing to detect the RNA lifecycle (including…”
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