Search Results - "Xie, Xianrong"
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CRISPR-GE: A Convenient Software Toolkit for CRISPR-Based Genome Editing
Published in Molecular plant (12-09-2017)“…Dear Editor Use of the clustered regularly interspaced short palindromic repeat (CRISPR)-associated protein9 (Cas9) and Cpfl systems in plants (Ma et al.,…”
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DSDecode: A Web-Based Tool for Decoding of Sequencing Chromatograms for Genotyping of Targeted Mutations
Published in Molecular plant (01-09-2015)“…Dear Editor, The transcription activator-like effector nucleases (TALENs) and clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 genome…”
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An asymmetric allelic interaction drives allele transmission bias in interspecific rice hybrids
Published in Nature communications (07-06-2019)“…Hybrid sterility (HS) between Oryza sativa (Asian rice) and O . glaberrima (African rice) is mainly controlled by the S1 locus. However, our limited…”
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Quantitative regulation of Waxy expression by CRISPR/Cas9‐based promoter and 5'UTR‐intron editing improves grain quality in rice
Published in Plant biotechnology journal (01-12-2020)“…In rice (Oryza sativa L.), the varied activities of natural Wx alleles regulate different amylose contents (AC), gel consistency (GC) and pasting viscosity of…”
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Dynamic change and driving force of natural capital in Qinghai Province based on the three-dimensional ecological footprint, China
Published in Ecological indicators (01-12-2022)“…•Study on the sustainable development of three-dimensional ecological footprint.•Dynamic change characteristics of natural capital in Qinghai Province.•Changes…”
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Strong photoperiod sensitivity is controlled by cooperation and competition among Hd1, Ghd7 and DTH8 in rice heading
Published in The New phytologist (01-02-2021)“…Summary Rice (Oryza sativa) is a short‐day (SD) plant originally having strong photoperiod sensitivity (PS), with SDs promoting and long days (LDs) suppressing…”
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Development of "Purple Endosperm Rice" by Engineering Anthocyanin Biosynthesis in the Endosperm with a High-Efficiency Transgene Stacking System
Published in Molecular plant (05-07-2017)“…Anthocyanins have high antioxidant activities, and engineering of anthocyanin biosynthesis in staple crops, such as rice (Oryza sativa L.), could provide…”
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Genomic structural variation-mediated allelic suppression causes hybrid male sterility in rice
Published in Nature communications (03-11-2017)“…Hybrids between divergent populations commonly show hybrid sterility; this reproductive barrier hinders hybrid breeding of the japonica and indica rice ( Oryza…”
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Multi-step formation, evolution, and functionalization of new cytoplasmic male sterility genes in the plant mitochondrial genomes
Published in Cell research (01-01-2017)“…New gene origination is a major source of genomic innovations that confer phenotyp ic changes and biological di- versity. Generation of new mitochondrial genes…”
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Interspecific Hybrid Sterility in Rice Is Mediated by OgTPR1 at the S1 Locus Encoding a Peptidase-like Protein
Published in Molecular plant (07-08-2017)Get full text
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Quantitative Trait Locus Mapping of Seed Vigor in Soybean under -20 °C Storage and Accelerated Aging Conditions via RAD Sequencing
Published in Current issues in molecular biology (12-11-2021)“…Due to its fast deterioration, soybean ( L.) has an inherently poor seed vigor. Vigor loss occurring during storage is one of the main obstacles to soybean…”
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Copy number variation of the restorer Rf4 underlies human selection of three-line hybrid rice breeding
Published in Nature communications (13-11-2023)“…Cytoplasmic male sterility (CMS) lines are important for breeding hybrid crops, and utilization of CMS lines requires strong fertility restorer ( Rf ) genes…”
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Modulation of evening complex activity enables north-to-south adaptation of soybean
Published in Science China. Life sciences (01-02-2021)“…Soybean, a typical short-day crop, is sensitive to photoperiod, which is a major limiting factor defining its north-to-south cultivation range. The…”
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Exploring C-to-G and A-to-Y Base Editing in Rice by Using New Vector Tools
Published in International journal of molecular sciences (20-07-2022)“…CRISPR/Cas9-based cytosine base editors (CBEs) and adenine base editors (ABEs) can efficiently mediate C-to-T/G-to-A and A-to-G/T-to-C substitutions,…”
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The ScCas9++ variant expands the CRISPR toolbox for genome editing in plants
Published in Journal of integrative plant biology (01-09-2021)“…The development of clustered regularly interspaced palindromic repeats (CRISPR)‐associated protein (Cas) variants with a broader recognition scope is critical…”
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Blocking Rice Shoot Gravitropism by Altering One Amino Acid in LAZY1
Published in International journal of molecular sciences (21-08-2022)“…Tiller angle is an important trait that determines plant architecture and yield in cereal crops. Tiller angle is partially controlled during gravistimulation…”
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MMEJ-KO: a web tool for designing paired CRISPR guide RNAs for microhomology-mediated end joining fragment deletion
Published in Science China. Life sciences (01-06-2021)Get full text
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A chromosome-level genome assembly of the wild rice Oryza rufipogon facilitates tracing the origins of Asian cultivated rice
Published in Science China. Life sciences (01-02-2021)“…Oryza rufipogon Griff. is a wild progenitor of the Asian cultivated rice Oryza sativa. To better understand the genomic diversity of the wild rice,…”
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Overexpression of maize GOLDEN2 in rice and maize calli improves regeneration by activating chloroplast development
Published in Science China. Life sciences (01-02-2023)“…Golden2 (G2), a member of the GARP transcription factor superfamily, regulates several biological processes and phytohormone signaling pathways in plants. In…”
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Shortened snRNA promoters for efficient CRISPR/Cas-based multiplex genome editing in monocot plants
Published in Science China. Life sciences (01-06-2020)Get full text
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