Search Results - "Xiao, Chuanle"

A human circulating immune cell landscape in aging and COVID-19 by Zheng, Yingfeng, Liu, Xiuxing, Le, Wenqing, Xie, Lihui, Li, He, Wen, Wen, Wang, Si, Ma, Shuai, Huang, Zhaohao, Ye, Jinguo, Shi, Wen, Ye, Yanxia, Liu, Zunpeng, Song, Moshi, Zhang, Weiqi, Han, Jing-Dong J., Izpisua Belmonte, Juan Carlos, Xiao, Chuanle, Qu, Jing, Wang, Hongyang, Liu, Guang-Hui, Su, Wenru

“…Age-associated changes in immune cells have been linked to an increased risk for infection. However, a global and detailed characterization of the changes that…”
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Single-cell analysis of isoform switching and transposable element expression during preimplantation embryonic development by Wang, Chaoyang, Shi, Zhuoxing, Huang, Qingpei, Liu, Rong, Su, Dan, Chang, Lei, Xiao, Chuanle, Fan, Xiaoying

“…Alternative splicing is an essential regulatory mechanism for development and pathogenesis. Through alternative splicing one gene can encode multiple isoforms…”
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De novo diploid genome assembly using long noisy reads by Nie, Fan, Ni, Peng, Huang, Neng, Zhang, Jun, Wang, Zhenyu, Xiao, Chuanle, Luo, Feng, Wang, Jianxin

“…The high sequencing error rate has impeded the application of long noisy reads for diploid genome assembly. Most existing assemblers failed to generate…”
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Transfer RNAs Mediate the Rapid Adaptation of Escherichia coli to Oxidative Stress by Zhong, Jiayong, Xiao, Chuanle, Gu, Wei, Du, Gaofei, Sun, Xuesong, He, Qing-Yu, Zhang, Gong

“…Translational systems can respond promptly to sudden environmental changes to provide rapid adaptations to environmental stress. Unlike the well-studied…”
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A high heterozygosity genome assembly of Aedes albopictus enables the discovery of the association of PGANT3 with blood-feeding behavior by Deng, Yuhua, Ren, Shuyi, Liu, Qiong, Zhou, Dan, Zhong, Caimei, Jin, Yabin, Xie, Lihua, Gu, Jinbao, Xiao, Chuanle

“…The Asian tiger mosquito, Aedes albopictus, is a global invasive species, notorious for its role in transmitting dangerous human arboviruses such as dengue and…”
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Compacting a synthetic yeast chromosome arm by Luo, Zhouqing, Yu, Kang, Xie, Shangqian, Monti, Marco, Schindler, Daniel, Fang, Yuan, Zhao, Shijun, Liang, Zhenzhen, Jiang, Shuangying, Luan, Meiwei, Xiao, Chuanle, Cai, Yizhi, Dai, Junbiao

“…Redundancy is a common feature of genomes, presumably to ensure robust growth under different and changing conditions. Genome compaction, removing sequences…”
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Low-cost, Low-bias and Low-input RNA-seq with High Experimental Verifiability based on Semiconductor Sequencing by Mai, Zhibiao, Xiao, Chuanle, Jin, Jingjie, Zhang, Gong

“…Low-input RNA-seq is powerful to represent the gene expression profiles with limited number of cells, especially when single-cell variations are not the aim…”
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Integrated single-cell analysis revealed immune dynamics during Ad5-nCoV immunization by Cao, Qiqi, Wu, Shipo, Xiao, Chuanle, Chen, Shuzhen, Chi, Xiangyang, Cui, Xiuliang, Tang, Hao, Su, Wenru, Zheng, Yingfeng, Zhong, Jiayong, Li, Zhaomin, Li, Fang, Chen, Haijia, Hou, Lihua, Wang, Hongyang, Wen, Wen

“…Coronavirus disease 2019 (COVID-19), driven by SARS-CoV-2, is a severe infectious disease that has become a global health threat. Vaccines are among the most…”
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Environmental Water and Sediment Microbial Communities Shape Intestine Microbiota for Host Health: The Central Dogma in an Anthropogenic Aquaculture Ecosystem by Huang, Zhijian, Hou, Dongwei, Zhou, Renjun, Zeng, Shenzheng, Xing, Chengguang, Wei, Dongdong, Deng, Xisha, Yu, Lingfei, Wang, Hao, Deng, Zhixuan, Weng, Shaoping, Ning, Daliang, Xiao, Chuanle, Yan, Qingyun, Zhou, Jizhong, He, Zhili, He, Jianguo

“…From increasing evidence has emerged a tight link among the environment, intestine microbiota, and host health status; moreover, the microbial interaction in…”
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Applications and potentials of nanopore sequencing in the (epi)genome and (epi)transcriptome era by Xie, Shangqian, Leung, Amy Wing-Sze, Zheng, Zhenxian, Zhang, Dake, Xiao, Chuanle, Luo, Ruibang, Luo, Ming, Zhang, Shoudong

“…The Human Genome Project opened an era of (epi)genomic research, and also provided a platform for the development of new sequencing technologies. During and…”
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Phosphoproteome analysis of the pathogenic bacterium Helicobacter pylori reveals over-representation of tyrosine phosphorylation and multiply phosphorylated proteins by Ge, Ruiguang, Sun, Xuesong, Xiao, Chuanle, Yin, Xingfeng, Shan, Weiran, Chen, Zhuo, He, Qing-Yu

“…Increasing evidence shows that protein phosphorylation on serine (Ser), threonine (Thr) and tyrosine (Tyr) residues is a major regulatory post‐translational…”
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Putative cobalt- and nickel-binding proteins and motifs in Streptococcus pneumoniae by Sun, Xuesong, Yu, Guangchuang, Xu, Qian, Li, Nan, Xiao, Chuanle, Yin, Xingfeng, Cao, Kun, Han, Junlong, He, Qing-Yu

“…Cobalt and nickel play important roles in various biological processes. The present work focuses on the enrichment and identification of Co- and Ni-binding…”
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Lipoprotein FtsB in Streptococcus pyogenes binds ferrichrome in two steps with residues Tyr137 and Trp204 as critical ligands by Li, Hui, Li, Nan, Xu, Qian, Xiao, Chuanle, Wang, Hongcui, Guo, Zhong, Zhang, Jing, Sun, Xuesong, He, Qing-Yu

“…Lipoprotein FtsB is a component of the FtsABCD transporter that is responsible for ferrichrome binding and uptake in the Gram-positive pathogen Streptococcus…”
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Author Correction: Immune cell profiling of COVID-19 patients in the recovery stage by single-cell sequencing by Wen, Wen, Su, Wenru, Tang, Hao, Le, Wenqing, Zhang, Xiaopeng, Zheng, Yingfeng, Liu, Xiuxing, Xie, Lihui, Li, Jianmin, Ye, Jinguo, Dong, Liwei, Cui, Xiuliang, Miao, Yushan, Wang, Depeng, Dong, Jiantao, Xiao, Chuanle, Chen, Wei, Wang, Hongyang

“…An amendment to this paper has been published and can be accessed via a link at the top of the paper…”
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Immune cell profiling of COVID-19 patients in the recovery stageby single-cell sequencing by Wen, Wen, Su Wenru, Tang, Hao, Le Wenqing, Zhang, Xiaopeng, Zheng Yingfeng, Liu Xiuxing, Xie Lihui, Li, Jianmin, Ye Jinguo, Dong Liwei, Cui Xiuliang, Miao Yushan, Wang Depeng, Dong Jiantao, Xiao Chuanle, Chen, Wei, Wang, Hongyang

“…COVID-19, caused by SARS-CoV-2, has recently affected over 1,200,000 people and killed more than 60,000. The key immune cell subsets change and their states…”
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Identification of ubiquitinated proteins from human multiple myeloma U266 cells by proteomics by Jia, HongLing, Liu, ChaoWu, Ge, Feng, Xiao, ChuanLe, Lu, ChunHua, Wang, Tong, He, QingYu

“…To identify ubiquitinated proteins from complex human multiple myeloma (MM) U266 cells, a malignant disorder of differentiated human B cells. Employing a…”
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MethSMRT: an integrative database for DNA N6-methyladenine and N4-methylcytosine generated by single-molecular real-time sequencing by Ye, Pohao, Luan, Yizhao, Chen, Kaining, Liu, Yizhi, Xiao, Chuanle, Xie, Zhi

“…DNA methylation is an important type of epigenetic modifications, where 5- methylcytosine (5mC), 6-methyadenine (6mA) and 4-methylcytosine (4mC) are the most…”
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Immune cell profiling of COVID-19 patients in the recovery stage by single-cell sequencing by Wen, Wen, Su, Wenru, Tang, Hao, Le, Wenqing, Zhang, Xiaopeng, Zheng, Yingfeng, Liu, Xiuxing, Xie, Lihui, Li, Jianmin, Ye, Jinguo, Dong, Liwei, Cui, Xiuliang, Miao, Yushan, Wang, Depeng, Dong, Jiantao, Xiao, Chuanle, Chen, Wei, Wang, Hongyang

“…COVID-19, caused by SARS-CoV-2, has recently affected over 1,200,000 people and killed more than 60,000. The key immune cell subsets change and their states…”
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Targeting inflammasomes and pyroptosis in retinal diseases—molecular mechanisms and future perspectives by Sun, Yimeng, Li, Fan, Liu, Yunfei, Qiao, Dijie, Yao, Xinyu, Liu, Guei-Sheung, Li, Dequan, Xiao, Chuanle, Wang, Tao, Chi, Wei

“…Retinal diseases encompass various conditions associated with sight-threatening immune responses and are leading causes of blindness worldwide. These diseases…”
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Semi-automated assembly of high-quality diploid human reference genomes by Jarvis, Erich D., Formenti, Giulio, Rhie, Arang, Guarracino, Andrea, Yang, Chentao, Wood, Jonathan, Tracey, Alan, Thibaud-Nissen, Francoise, Vollger, Mitchell R., Porubsky, David, Cheng, Haoyu, Asri, Mobin, Logsdon, Glennis A., Carnevali, Paolo, Chaisson, Mark J. P., Chin, Chen-Shan, Cody, Sarah, Collins, Joanna, Ebert, Peter, Escalona, Merly, Fedrigo, Olivier, Fulton, Robert S., Fulton, Lucinda L., Garg, Shilpa, Gerton, Jennifer L., Ghurye, Jay, Granat, Anastasiya, Green, Richard E., Harvey, William, Hasenfeld, Patrick, Hastie, Alex, Haukness, Marina, Jaeger, Erich B., Jain, Miten, Kirsche, Melanie, Kolmogorov, Mikhail, Korbel, Jan O., Koren, Sergey, Korlach, Jonas, Lee, Joyce, Li, Daofeng, Lindsay, Tina, Lucas, Julian, Luo, Feng, Marschall, Tobias, Mitchell, Matthew W., McDaniel, Jennifer, Nie, Fan, Olsen, Hugh E., Olson, Nathan D., Pesout, Trevor, Potapova, Tamara, Puiu, Daniela, Regier, Allison, Ruan, Jue, Salzberg, Steven L., Sanders, Ashley D., Schatz, Michael C., Schmitt, Anthony, Schneider, Valerie A., Selvaraj, Siddarth, Shafin, Kishwar, Shumate, Alaina, Stitziel, Nathan O., Stober, Catherine, Torrance, James, Wagner, Justin, Wang, Jianxin, Wenger, Aaron, Xiao, Chuanle, Zimin, Aleksey V., Zhang, Guojie, Wang, Ting, Li, Heng, Garrison, Erik, Haussler, David, Hall, Ira, Zook, Justin M., Eichler, Evan E., Phillippy, Adam M., Paten, Benedict, Howe, Kerstin, Miga, Karen H.

“…The current human reference genome, GRCh38, represents over 20 years of effort to generate a high-quality assembly, which has benefitted society 1 , 2 …”
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