Search Results - "Wower, J"
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Comparative sequence analysis of tmRNA
Published in Nucleic acids research (15-05-1999)“…Minimal secondary structures of the bacterial and plastid tmRNAs were derived by comparative analyses of 50 aligned tmRNA sequences. The structures include 12…”
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The tmRNA database (tmRDB)
Published in Nucleic acids research (1999)“…As of September, 1998, a total of 43 sequences are contained within the tmRNA database (tmRDB). the tmRNA sequences are arranged alphabetically and ordered…”
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3
Three-Dimensional Folding of the tRNA-like Domain of Escherichia coli tmRNA
Published in Biochemistry (Easton) (14-08-2001)“…UV irradiation of Escherichia coli tmRNA both on and off the ribosome induced covalent cross-links between its 3‘- and its 5‘-terminal segments. Cross-linking…”
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Labeling the peptidyltransferase center of the Escherichia coli ribosome with photoreactive tRNA(Phe) derivatives containing azidoadenosine at the 3' end of the acceptor arm: a model of the tRNA-ribosome complex
Published in Proceedings of the National Academy of Sciences - PNAS (01-07-1989)“…Photoreactive derivatives of yeast tRNA(Phe) containing 2-azidoadenosine (2N3A) at position 73 or 76 have been crosslinked to the peptidyl site of Escherichia…”
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5
Quality control of the elongation step of protein synthesis by tmRNP
Published in The Journal of nutrition (01-11-2001)“…Trans-translation is a quality-control process, activated upon premature termination of protein elongation, which recycles stalled ribosomes and degrades…”
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Expression and Molecular Characterization of Estrogen Receptor Alpha Messenger RNA in Male Reproductive Organs of Adult Goats
Published in Biology of reproduction (01-05-2001)“…The fact that male estrogen receptor alpha (ERα) knockout mice are infertile indicates a role for this receptor in male reproduction. Here, objectives were to…”
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Topography of the E site on the Escherichia coli ribosome
Published in The EMBO journal (01-02-1993)“…Three photoreactive tRNA probes have been utilized in order to identify ribosomal components that are in contact with the aminoacyl acceptor end and the…”
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Recombinant photoreactive tRNA molecules as probes for cross-linking studies
Published in Biochimie (1994)“…Photoreactive tRNA derivatives have been used extensively for investigating the interaction of tRNA molecules with their ligands and substrates. Recombinant…”
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A consonant model of the tRNA-ribosome complex during the elongation cycle of translation
Published in Biochimie (01-07-1991)“…Chemical and photochemical affinity techniques have been used extensively to determine the positions of the tRNA binding sites on the Escherichia coli…”
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10
Peptidyl transferase and beyond
Published in Biochemistry and cell biology (01-11-1995)“…The peptidyl transferase center of the Escherichia coli ribosome encompasses a number of 50S-subunit proteins as well as several specific segments of the 23S…”
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11
Photochemical cross-linking of the anticodon loop of yeast tRNA(Phe) to 30S-subunit protein S7 at the ribosomal A and P sites
Published in Biochimie (01-04-1992)“…Yeast tRNA(Phe), containing the photoreactive nucleoside 2-azidoadenosine at position 37 within the anticodon loop, has been cross-linked to the aminoacyl-tRNA…”
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12
tmRDB (tmRNA database)
Published in Nucleic acids research (01-01-2003)“…Maintained at the University of Texas Health Science Center at Tyler, Texas, the tmRNA database (tmRDB) is accessible at the URL…”
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13
Kinetic Parameters for tmRNA Binding to Alanyl-tRNA Synthetase and Elongation Factor Tu from Escherichia coli
Published in Biochemistry (Easton) (14-03-2000)“…Aminoacylation and transportation of tmRNA to stalled ribosomes constitute prerequisite steps for trans-translation, a process facilitating the release of…”
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14
Binding and cross-linking of tmRNA to ribosomal protein S1, on and off the Escherichia coli ribosome
Published in The EMBO journal (01-12-2000)“…UV irradiation of an in vitro translation mixture induced cross‐linking of 4‐thioU‐substituted tmRNA to Escherichia coli ribosomes by forming covalent…”
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15
Transfer-messenger RNA unfolds as it transits the ribosome
Published in RNA (Cambridge) (01-05-2005)“…In bacteria, translation of mRNAs lacking stop codons produces truncated polypeptides and traps ribosomes in unproductive complexes. Potentially harmful…”
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Contributions of Pseudoknots and Protein SmpB to the Structure and Function of tmRNA in trans-Translation
Published in The Journal of biological chemistry (24-12-2004)“…Bacteria contain transfer-messenger RNA (tmRNA), a molecule that during trans-translation tags incompletely translated proteins with a small peptide to signal…”
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17
Photochemical labeling of bovine pancreatic ribonuclease A with 8-azidoadenosine 3',5'-bisphosphate
Published in Biochemistry (Easton) (21-02-1989)“…A simple method has been developed for the preparation of 5'-32P-labeled 8-azidoadenosine 3',5'-bisphosphate (p8N3Ap) for use in photoaffinity labeling…”
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Comparative 3-D modeling of tmRNA
Published in BMC molecular biology (15-06-2005)“…Trans-translation releases stalled ribosomes from truncated mRNAs and tags defective proteins for proteolytic degradation using transfer-messenger RNA (tmRNA)…”
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tmRDB (tmRNA database)
Published in Nucleic acids research (01-01-2001)“…The tmRNA database (tmRDB) is maintained at the University of Texas Health Science Center at Tyler, Texas, and accessible on the World Wide Web at the URL…”
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20
tmRDB (tmRNA database)
Published in Nucleic acids research (01-01-2000)“…The tmRNA database (tmRDB) is maintained at the University of Texas Health Science Center at Tyler, Texas, and is accessible on the WWW at URL…”
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