Search Results - "Witte, René"

Semantic representation of scientific literature: bringing claims, contributions and named entities onto the Linked Open Data cloud by Sateli, Bahar, Witte, René

“…Motivation. Finding relevant scientific literature is one of the essential tasks researchers are facing on a daily basis. Digital libraries and web information…”
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Automated extraction and semantic analysis of mutation impacts from the biomedical literature by Naderi, Nona, Witte, René

“…Mutations as sources of evolution have long been the focus of attention in the biomedical literature. Accessing the mutational information and their impacts on…”
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Assessing the quality factors found in in-line documentation written in natural language: The JavadocMiner by Khamis, Ninus, Rilling, Juergen, Witte, René

“…An important software engineering artifact used by developers and maintainers to assist in software comprehension and maintenance is source code documentation…”
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OrganismTagger: detection, normalization and grounding of organism entities in biomedical documents by Naderi, Nona, Kappler, Thomas, Baker, Christopher J. O., Witte, René

“…Motivation: Semantic tagging of organism mentions in full-text articles is an important part of literature mining and semantic enrichment solutions. Tagged…”
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ScholarLens: extracting competences from research publications for the automatic generation of semantic user profiles by Sateli, Bahar, Löffler, Felicitas, König-Ries, Birgitta, Witte, René

“…Motivation Scientists increasingly rely on intelligent information systems to help them in their daily tasks, in particular for managing research objects, like…”
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Algorithms and semantic infrastructure for mutation impact extraction and grounding by Laurila, Jonas B, Naderi, Nona, Witte, René, Riazanov, Alexandre, Kouznetsov, Alexandre, Baker, Christopher J O

“…Mutation impact extraction is a hitherto unaccomplished task in state of the art mutation extraction systems. Protein mutations and their impacts on protein…”
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Semantic text mining support for lignocellulose research by Meurs, Marie-Jean, Murphy, Caitlin, Morgenstern, Ingo, Butler, Greg, Powlowski, Justin, Tsang, Adrian, Witte, René

“…Biofuels produced from biomass are considered to be promising sustainable alternatives to fossil fuels. The conversion of lignocellulose into fermentable…”
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Converting a Historical Architecture Encyclopedia into a Semantic Knowledge Base by Witte, R., Krestel, R., Kappler, T., Lockemann, P.C.

“…Digitizing a historical document using ontologies and natural language processing techniques can transform it from arcane text to a useful knowledge base.The…”
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Mutation Mining—A Prospector's Tale by Baker, Christopher J. O., Witte, René

“…Protein structure visualization tools render images that allow the user to explore structural features of a protein. Context specific information relating to a…”
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Ontology-based Program Comprehension Tool Supporting Website Architectural Evolution by Zhang, Yonggang, Witte, Rene, Rilling, Juergen, Haarslev, Volker

“…A challenge of existing program comprehension approaches is to provide consistent and flexible representations for software systems. Maintainers have to match…”
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Enhanced semantic access to the protein engineering literature using ontologies populated by text mining by Witte, Rene, Kappler, Thomas, Baker, Christopher J O

“…The biomedical literature is growing at an ever-increasing rate, which pronounces the need to support scientists with advanced, automated means of accessing…”
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Natural Language Processing for Semantic Assistance in Web Portals by Bakalov, Fedor, Sateli, Bahar, Witte, Rene, Meurs, Marie-Jean, Konig-Ries, Birgitta

“…Web portals are a major class of web-based content management systems. They can provide users with a single point of access to a multitude of content sources…”
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A Quality Perspective of Software Evolvability Using Semantic Analysis by Schugerl, P., Rilling, J., Witte, R., Charland, P.

“…Software development and maintenance are highly distributed processes that involve a multitude of supporting tools and resources. Knowledge relevant to these…”
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Semantic Technologies in System Maintenance (STSM 2008) by Rilling, J., Witte, R., Gasevic, D., Pan, J.Z.

“…This paper gives a brief overview of the international workshop on semantic technologies in system maintenance. It describes a number of semantic technologies…”
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OpenTrace: An Open Source Workbench for Automatic Software Traceability Link Recovery by Angius, E., Witte, R.

“…Research in automatic trace ability link recovery typically involves running a large number experiments on various datasets in order to compare the performance…”
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A Context-Driven Software Comprehension Process Model by Meng, W.J., Rilling, J., Zhang, Y., Witte, R., Mudur, S., Charland, P.

“…Comprehension is an essential part of software evolution. Only software that is well understood can evolve in a controlled manner. In this paper, we present a…”
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Assessment of NER solutions against the first and second CALBC Silver Standard Corpus by Rebholz-Schuhmann, Dietrich, Jimeno Yepes, Antonio, Li, Chen, Kafkas, Senay, Lewin, Ian, Kang, Ning, Corbett, Peter, Milward, David, Buyko, Ekaterina, Beisswanger, Elena, Hornbostel, Kerstin, Kouznetsov, Alexandre, Witte, René, Laurila, Jonas B, Baker, Christopher Jo, Kuo, Cheng-Ju, Clematide, Simone, Rinaldi, Fabio, Farkas, Richárd, Móra, György, Hara, Kazuo, Furlong, Laura I, Rautschka, Michael, Neves, Mariana Lara, Pascual-Montano, Alberto, Wei, Qi, Collier, Nigel, Chowdhury, Md Faisal Mahbub, Lavelli, Alberto, Berlanga, Rafael, Morante, Roser, Van Asch, Vincent, Daelemans, Walter, Marina, José Luís, van Mulligen, Erik, Kors, Jan, Hahn, Udo

“…Competitions in text mining have been used to measure the performance of automatic text processing solutions against a manually annotated gold standard corpus…”
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Towards a systematic evaluation of protein mutation extraction systems by Witte, René, Baker, Christopher J O

“…The development of text analysis systems targeting the extraction of information about mutations from research publications is an emergent topic in biomedical…”
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Agents and databases: friends or foes? by Lockemann, P.C., Witte, R.

“…On first glance agent technology seems more like a hostile intruder into the database world. On the other hand, the two could easily complement each other,…”
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Fuzzy extensions for reverse engineering repository models by Kolsch, U., Witte, R.

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