Search Results - "Willard, Adam"
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Instantaneous Liquid Interfaces
Published in The journal of physical chemistry. B (11-02-2010)“…We describe and illustrate a simple procedure for identifying a liquid interface from atomic coordinates. In particular, a coarse-grained density field is…”
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A theory of phonon-induced friction on molecular adsorbates
Published in Proceedings of the National Academy of Sciences - PNAS (30-07-2024)“…In this manuscript, we provide a general theory for how surface phonons couple to molecular adsorbates. Our theory maps the extended dynamics of a surface's…”
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3
Photoswitching topology in polymer networks with metal–organic cages as crosslinks
Published in Nature (London) (01-08-2018)“…Polymer networks can have a range of desirable properties such as mechanical strength, wide compositional diversity between different materials, permanent…”
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Water’s Interfacial Hydrogen Bonding Structure Reveals the Effective Strength of Surface–Water Interactions
Published in The journal of physical chemistry. B (05-07-2018)“…The interactions of a hydrophilic surface with water can significantly influence the characteristics of the liquid water interface. In this manuscript, we…”
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Hydration of metal surfaces can be dynamically heterogeneous and hydrophobic
Published in Proceedings of the National Academy of Sciences - PNAS (12-03-2013)“…We have applied molecular dynamics and methods of importance sampling to study structure and dynamics of liquid water in contact with metal surfaces. The…”
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Quantifying the Molecular Polarization Response of Liquid Water Interfaces at Heterogeneously Charged Surfaces
Published in Journal of chemical theory and computation (28-03-2023)“…The hydration shells of proteins mediate interactions, such as small molecule binding, that are vital to their biological function or in some cases their…”
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Constant Potential, Electrochemically Active Boundary Conditions for Electrochemical Simulation
Published in Journal of physical chemistry. C (03-10-2019)“…In this manuscript, we present a model for simulating active electrochemical systems using a classical molecular dynamics framework. We describe a…”
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Bayesian data analysis reveals no preference for cardinal Tafel slopes in CO2 reduction electrocatalysis
Published in Nature communications (29-01-2021)“…The Tafel slope is a key parameter often quoted to characterize the efficacy of an electrochemical catalyst. In this paper, we develop a Bayesian data analysis…”
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Characterizing Hydration Properties Based on the Orientational Structure of Interfacial Water Molecules
Published in Journal of chemical theory and computation (13-02-2018)“…In this work, we present a general computational method for characterizing the molecular structure of liquid water interfaces as sampled from atomistic…”
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10
Nonequilibrium Work Relations and Response Theories in Ensemble Quantum Systems
Published in The journal of physical chemistry letters (18-11-2021)“…We develop a nonequilibrium response theory for macroscopic quantum systems that separates the contributions of ensemble heterogeneity and intrinsic quantum…”
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Modeling Interfacial Electron Transfer in the Double Layer: The Interplay between Electrode Coupling and Electrostatic Driving
Published in Journal of physical chemistry. C (16-01-2020)“…In this manuscript, we present a theoretical model for studying the population dynamics of electrochemical systems within the region of the electrical double…”
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Hot charge-transfer excitons set the time limit for charge separation at donor/acceptor interfaces in organic photovoltaics
Published in Nature materials (01-01-2013)“…Photocurrent generation in organic photovoltaics (OPVs) relies on the dissociation of excitons into free electrons and holes at donor/acceptor…”
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13
Representing the Molecular Signatures of Disordered Molecular Semiconductors in Size-Extendable Models of Exciton Dynamics
Published in The journal of physical chemistry. B (25-06-2020)“…This manuscript presents an approach to developing size-extendable phenomenological site-based models for simulating exciton dynamics in disordered organic…”
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14
Highly branched and loop-rich gels via formation of metal–organic cages linked by polymers
Published in Nature chemistry (01-01-2016)“…Gels formed via metal–ligand coordination typically have very low branch functionality, f , as they consist of ∼2–3 polymer chains linked to single metal ions…”
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15
Modeling Surface Vibrations and Their Role in Molecular Adsorption: A Generalized Langevin Approach
Published in Journal of chemical theory and computation (26-09-2023)“…The atomic vibrations of a solid surface can play a significant role in the reactions of surface-bound molecules, as well as their adsorption and desorption…”
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Trajectory Ensemble Methods Provide Single-Molecule Statistics for Quantum Dynamical Systems
Published in Journal of chemical theory and computation (12-04-2022)“…The emergence of experiments capable of probing quantum dynamics at the single-molecule level requires the development of new theoretical tools capable of…”
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Three-Body Hydrogen Bond Defects Contribute Significantly to the Dielectric Properties of the Liquid Water–Vapor Interface
Published in The journal of physical chemistry letters (05-04-2018)“…We present a simple model of aqueous interfacial molecular structure, and we use this model to isolate the effects of hydrogen bonding on the dielectric…”
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18
Water Dynamics Around Proteins: T- and R‑States of Hemoglobin and Melittin
Published in The journal of physical chemistry. B (30-07-2020)“…The water dynamics, as characterized by the local hydrophobicity (LH), is investigated for tetrameric hemoglobin (Hb) and dimeric melittin. For the T0 to R0…”
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19
Microscopic dynamics of charge separation at the aqueous electrochemical interface
Published in Proceedings of the National Academy of Sciences - PNAS (19-12-2017)“…We have used molecular simulation and methods of importance sampling to study the thermodynamics and kinetics of ionic charge separation at a liquid…”
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Second-Harmonic Generation Provides Insight into the Screening Response of the Liquid Water Interface
Published in Journal of physical chemistry. C (03-08-2023)“…We use second-harmonic generation (SHG), molecular dynamics simulation, and theoretical modeling to study the response of the neat liquid water–air interface…”
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