Search Results - "Weilandt, Daniel R"

Slow TCA flux and ATP production in primary solid tumours but not metastases by Bartman, Caroline R., Weilandt, Daniel R., Shen, Yihui, Lee, Won Dong, Han, Yujiao, TeSlaa, Tara, Jankowski, Connor S. R., Samarah, Laith, Park, Noel R., da Silva-Diz, Victoria, Aleksandrova, Maya, Gultekin, Yetis, Marishta, Argit, Wang, Lin, Yang, Lifeng, Roichman, Asael, Bhatt, Vrushank, Lan, Taijin, Hu, Zhixian, Xing, Xi, Lu, Wenyun, Davidson, Shawn, Wühr, Martin, Vander Heiden, Matthew G., Herranz, Daniel, Guo, Jessie Yanxiang, Kang, Yibin, Rabinowitz, Joshua D.

“…Tissues derive ATP from two pathways—glycolysis and the tricarboxylic acid (TCA) cycle coupled to the electron transport chain. Most energy in mammals is…”
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Optimal enzyme utilization suggests that concentrations and thermodynamics determine binding mechanisms and enzyme saturations by Sahin, Asli, Weilandt, Daniel R., Hatzimanikatis, Vassily

“…Deciphering the metabolic functions of organisms requires understanding the dynamic responses of living cells upon genetic and environmental perturbations,…”
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Single-molecule kinetic analysis of HP1-chromatin binding reveals a dynamic network of histone modification and DNA interactions by Bryan, Louise C, Weilandt, Daniel R, Bachmann, Andreas L, Kilic, Sinan, Lechner, Carolin C, Odermatt, Pascal D, Fantner, Georg E, Georgeon, Sandrine, Hantschel, Oliver, Hatzimanikatis, Vassily, Fierz, Beat

“…Chromatin recruitment of effector proteins involved in gene regulation depends on multivalent interaction with histone post-translational modifications (PTMs)…”
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Particle-Based Simulation Reveals Macromolecular Crowding Effects on the Michaelis-Menten Mechanism by Weilandt, Daniel R., Hatzimanikatis, Vassily

“…Many computational models for analyzing and predicting cell physiology rely on in vitro data collected in dilute and controlled buffer solutions. However, this…”
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Symbolic kinetic models in python (SKiMpy): intuitive modeling of large-scale biological kinetic models by Weilandt, Daniel R, Salvy, Pierre, Masid, Maria, Fengos, Georgios, Denhardt-Erikson, Robin, Hosseini, Zhaleh, Hatzimanikatis, Vassily

“…Abstract Motivation Large-scale kinetic models are an invaluable tool to understand the dynamic and adaptive responses of biological systems. The development…”
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