Search Results - "Weg, Eric"

High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development by Daccord, Nicolas, Celton, Jean-Marc, Linsmith, Gareth, Becker, Claude, Choisne, Nathalie, Schijlen, Elio, van de Geest, Henri, Bianco, Luca, Micheletti, Diego, Velasco, Riccardo, Di Pierro, Erica Adele, Gouzy, Jérôme, Rees, D Jasper G, Guérif, Philippe, Muranty, Hélène, Durel, Charles-Eric, Laurens, François, Lespinasse, Yves, Gaillard, Sylvain, Aubourg, Sébastien, Quesneville, Hadi, Weigel, Detlef, van de Weg, Eric, Troggio, Michela, Bucher, Etienne

“…Etienne Bucher and colleagues use a combination of short- and long-read sequencing, along with optical mapping technologies, to produce the high-quality de…”
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Detecting QTLs and putative candidate genes involved in budbreak and flowering time in an apple multiparental population by Allard, Alix, Bink, Marco C.A.M., Martinez, Sébastien, Kelner, Jean-Jacques, Legave, Jean-Michel, di Guardo, Mario, Di Pierro, Erica A., Laurens, François, van de Weg, Eric W., Costes, Evelyne

“…In temperate trees, growth resumption in spring time results from chilling and heat requirements, and is an adaptive trait under global warming. Here, the…”
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Development and validation of the Axiom®Apple480K SNP genotyping array by Bianco, Luca, Cestaro, Alessandro, Linsmith, Gareth, Muranty, Hélène, Denancé, Caroline, Théron, Anthony, Poncet, Charles, Micheletti, Diego, Kerschbamer, Emanuela, Di Pierro, Erica A., Larger, Simone, Pindo, Massimo, Van de Weg, Eric, Davassi, Alessandro, Laurens, François, Velasco, Riccardo, Durel, Charles‐Eric, Troggio, Michela

“…Summary Cultivated apple (Malus × domestica Borkh.) is one of the most important fruit crops in temperate regions, and has great economic and cultural value…”
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The red bayberry genome and genetic basis of sex determination by Jia, Hui‐Min, Jia, Hui‐Juan, Cai, Qing‐Le, Wang, Yan, Zhao, Hai‐Bo, Yang, Wei‐Fei, Wang, Guo‐Yun, Li, Ying‐Hui, Zhan, Dong‐Liang, Shen, Yu‐Tong, Niu, Qing‐Feng, Chang, Le, Qiu, Jie, Zhao, Lan, Xie, Han‐Bing, Fu, Wan‐Yi, Jin, Jing, Li, Xiong‐Wei, Jiao, Yun, Zhou, Chao‐Chao, Tu, Ting, Chai, Chun‐Yan, Gao, Jin‐Long, Fan, Long‐Jiang, Weg, Eric, Wang, Jun‐Yi, Gao, Zhong‐Shan

“…Morella rubra, red bayberry, is an economically important fruit tree in south China. Here, we assembled the first high‐quality genome for both a female and a…”
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Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa by Bassil, Nahla V, Davis, Thomas M, Zhang, Hailong, Ficklin, Stephen, Mittmann, Mike, Webster, Teresa, Mahoney, Lise, Wood, David, Alperin, Elisabeth S, Rosyara, Umesh R, Koehorst-vanc Putten, Herma, Monfort, Amparo, Sargent, Daniel J, Amaya, Iraida, Denoyes, Beatrice, Bianco, Luca, van Dijk, Thijs, Pirani, Ali, Iezzoni, Amy, Main, Dorrie, Peace, Cameron, Yang, Yilong, Whitaker, Vance, Verma, Sujeet, Bellon, Laurent, Brew, Fiona, Herrera, Raul, van de Weg, Eric

“…BACKGROUNDA high-throughput genotyping platform is needed to enable marker-assisted breeding in the allo-octoploid cultivated strawberry Fragaria × ananassa…”
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Genetic structure of a QTL hotspot on chromosome 2 in sweet cherry indicates positive selection for favorable haplotypes by Cai, Lichun, Voorrips, Roeland E., van de Weg, Eric, Peace, Cameron, Iezzoni, Amy

“…A genomic region of particular interest for sweet cherry ( Prunus avium L.) breeding is a quantitative trait locus (QTL) “hotspot” on chromosome 2. QTLs for…”
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Development and preliminary evaluation of a 90 K Axiom[R] SNP array for the allo-octoploid cultivated strawberry Fragaria x ananassa by Bassil, Nahla V, Davis, Thomas M, Zhang, Hailong, Ficklin, Stephen, Mittmann, Mike, Webster, Teresa, Mahoney, Lise, Wood, David, Alperin, Elisabeth S, Rosyara, Umesh R, Koehorst-vanc Putten, Herma, Monfort, Amparo, Sargent, Daniel J, Amaya, Iraida, Denoyes, Beatrice, Bianco, Luca, van Dijk, Thijs, Pirani, Ali, Iezzoni, Amy, Main, Dorrie, Peace, Cameron, Yang, Yilong, Whitaker, Vance, Verma, Sujeet, Bellon, Laurent, Brew, Fiona, Herrera, Raul, van de Weg, Eric

“…A high-throughput genotyping platform is needed to enable marker-assisted breeding in the allo-octoploid cultivated strawberry Fragaria x ananassa. Short-read…”
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Epistatic fire blight resistance QTL alleles in the apple cultivar ‘Enterprise’ and selection X-6398 discovered and characterized through pedigree-informed analysis by van de Weg, Eric, Di Guardo, Mario, Jänsch, Melanie, Socquet-Juglard, Didier, Costa, Fabrizio, Baumgartner, Isabelle, Broggini, Giovanni A. L., Kellerhals, Markus, Troggio, Michela, Laurens, François, Durel, Charles-Eric, Patocchi, Andrea

“…Most cultivated apple cultivars are highly susceptible to fire blight, caused by Erwinia amylovora . However, differences in resistance levels are observed…”
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PediHaplotyper: software for consistent assignment of marker haplotypes in pedigrees by Voorrips, Roeland E., Bink, Marco C. A. M., Kruisselbrink, Johannes W., Koehorst-van Putten, Herma J. J., van de Weg, W. Eric

“…In the study of large outbred pedigrees with many founders, individual bi-allelic markers, such as SNP markers, carry little information. After phasing the…”
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Deciphering the genetic control of fruit texture in apple by multiple family-based analysis and genome-wide association by Di Guardo, Mario, Bink, Marco C.A.M., Guerra, Walter, Letschka, Thomas, Lozano, Lidia, Busatto, Nicola, Poles, Lara, Tadiello, Alice, Bianco, Luca, Visser, Richard G.F., van de Weg, Eric, Costa, Fabrizio

“…Fruit texture is a complex feature composed of mechanical and acoustic properties relying on the modifications occurring in the cell wall throughout fruit…”
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Integrated QTL detection for key breeding traits in multiple peach progenies by Hernández Mora, José R, Micheletti, Diego, Bink, Marco, Van de Weg, Eric, Cantín, Celia, Nazzicari, Nelson, Caprera, Andrea, Dettori, Maria Teresa, Micali, Sabrina, Banchi, Elisa, Campoy, José Antonio, Dirlewanger, Elisabeth, Lambert, Patrick, Pascal, Thierry, Troggio, Michela, Bassi, Daniele, Rossini, Laura, Verde, Ignazio, Quilot-Turion, Bénédicte, Laurens, François, Arús, Pere, Aranzana, Maria José

“…Peach (Prunus persica (L.) Batsch) is a major temperate fruit crop with an intense breeding activity. Breeding is facilitated by knowledge of the inheritance…”
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Pedigree-Based Analysis in a Multiparental Population of Octoploid Strawberry Reveals QTL Alleles Conferring Resistance to Phytophthora cactorum by Mangandi, Jozer, Verma, Sujeet, Osorio, Luis, Peres, Natalia A, van de Weg, Eric, Whitaker, Vance M

“…Understanding the genetic architecture of traits in breeding programs can be critical for making genetic progress. Important factors include the number of loci…”
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FaRXf1: a locus conferring resistance to angular leaf spot caused by Xanthomonas fragariae in octoploid strawberry by Roach, Jack A., Verma, Sujeet, Peres, Natalia A., Jamieson, Andrew R., van de Weg, W. Eric, Bink, Marco C. A. M., Bassil, Nahla V., Lee, Seonghee, Whitaker, Vance M.

“…Key message Angular leaf spot is a devastating bacterial disease of strawberry. Resistance from two wild accessions is highly heritable and controlled by a…”
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ASSIsT: an automatic SNP scoring tool for in- and outbreeding species by Di Guardo, Mario, Micheletti, Diego, Bianco, Luca, Koehorst-van Putten, Herma J J, Longhi, Sara, Costa, Fabrizio, Aranzana, Maria J, Velasco, Riccardo, Arús, Pere, Troggio, Michela, van de Weg, Eric W

“…ASSIsT (Automatic SNP ScorIng Tool) is a user-friendly customized pipeline for efficient calling and filtering of SNPs from Illumina Infinium arrays,…”
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Elucidating the genetic background of the early-flowering transgenic genetic stock T1190 with a high-density SNP array by Luo, Feixiong, van de Weg, Eric, Vanderzande, Stijn, Norelli, John L., Flachowsky, Henryk, Hanke, Viola, Peace, Cameron

“…Apple trees have a long juvenile period, which makes apple genetic improvement via breeding costly and time-consuming. Transgenic genetic stocks carrying the…”
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Genetic analysis of metabolites in apple fruits indicates an mQTL hotspot for phenolic compounds on linkage group 16 by Khan, Sabaz Ali, Chibon, Pierre-Yves, de Vos, Ric C.H., Schipper, Bert A., Walraven, Evert, Beekwilder, Jules, van Dijk, Thijs, Finkers, Richard, Visser, Richard G.F., van de Weg, Eric W., Bovy, Arnaud, Cestaro, Alessandro, Velasco, Riccardo, Jacobsen, Evert, Schouten, Henk J.

“…Apple (Malus×domesticaBorkh) is among the main sources of phenolic compounds in the human diet. The genetic basis of the quantitative variations of these…”
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Development of simple sequence repeat (SSR) markers from a genome survey of Chinese bayberry (Myrica rubra) by Jiao, Yun, Jia, Hui-min, Li, Xiong-wei, Chai, Ming-liang, Jia, Hui-juan, Chen, Zhe, Wang, Guo-yun, Chai, Chun-yan, van de Weg, Eric, Gao, Zhong-shan

“…Chinese bayberry (Myrica rubra Sieb. and Zucc.) is a subtropical evergreen tree originating in China. It has been cultivated in southern China for several…”
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Detection of ploidy and chromosomal aberrations in commercial oil palm using high-throughput SNP markers by Ngoot-Chin, Ting, Zulkifli, Muhammad Azwan, van de Weg, Eric, Zaki, Noorhariza Mohd, Serdari, Norhalida Mohamed, Mustaffa, Suzana, Zainol Abidin, Mohd Isa, Sanusi, Nik Shazana Nik Mohd, Smulders, Marinus J. M., Low, Eng Ti Leslie, Ithnin, Maizura, Singh, Rajinder

“…Main conclusion Karyotyping using high-density genome-wide SNP markers identified various chromosomal aberrations in oil palm ( Elaeis guineensis Jacq.) with…”
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Apple whole genome sequences: recent advances and new prospects by Peace, Cameron P., Bianco, Luca, Troggio, Michela, van de Weg, Eric, Howard, Nicholas P., Cornille, Amandine, Durel, Charles-Eric, Myles, Sean, Migicovsky, Zoë, Schaffer, Robert J., Costes, Evelyne, Fazio, Gennaro, Yamane, Hisayo, van Nocker, Steve, Gottschalk, Chris, Costa, Fabrizio, Chagné, David, Zhang, Xinzhong, Patocchi, Andrea, Gardiner, Susan E., Hardner, Craig, Kumar, Satish, Laurens, Francois, Bucher, Etienne, Main, Dorrie, Jung, Sook, Vanderzande, Stijn

“…In 2010, a major scientific milestone was achieved for tree fruit crops: publication of the first draft whole genome sequence (WGS) for apple ( Malus domestica…”
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Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families by Rymenants, Marijn, van de Weg, Eric, Auwerkerken, Annemarie, De Wit, Inge, Czech, Andrzej, Nijland, Bart, Heuven, Henri, De Storme, Nico, Keulemans, Wannes

“…Acidity and sweetness are important qualities for apple breeders and understanding their genetic regulation can improve the breeding process. In previous QTL…”
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