Search Results - "Wang, Jiuyu"
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Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference
Published in Cell (10-01-2019)“…Csm, a type III-A CRISPR-Cas interference complex, is a CRISPR RNA (crRNA)-guided RNase that also possesses target RNA-dependent DNase and cyclic…”
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2
Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites
Published in Cell research (01-11-2017)“…CTCF, a conserved 3D genome architecture protein, determines proper genome-wide chromatin looping interactions through directional binding to specific sequence…”
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3
Crystal structure of the RNA-guided immune surveillance Cascade complex in Escherichia coli
Published in Nature (London) (06-11-2014)“…The CRISPR/Cas system is an RNA-guided bacterial protection system against foreign nucleic acids of bacterial and archaeal origin; here a high-resolution…”
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4
An anti-CRISPR that represses its own transcription while blocking Cas9-target DNA binding
Published in Nature communications (28-02-2024)“…AcrIIA15 is an anti-CRISPR (Acr) protein that inhibits Staphylococcus aureus Cas9 (SaCas9). Although previous studies suggested it has dual functions, the…”
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5
Structural basis for two metal-ion catalysis of DNA cleavage by Cas12i2
Published in Nature communications (16-10-2020)“…To understand how the RuvC catalytic domain of Class 2 Cas proteins cleaves DNA, it will be necessary to elucidate the structures of RuvC-containing Cas…”
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Structure-based cleavage mechanism of Thermus thermophilus Argonaute DNA guide strand-mediated DNA target cleavage
Published in Proceedings of the National Academy of Sciences - PNAS (14-01-2014)“…We report on crystal structures of ternary Thermus thermophilus Argonaute (Tt Ago) complexes with 5′-phosphorylated guide DNA and a series of DNA targets…”
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7
A CRISPR evolutionary arms race: structural insights into viral anti-CRISPR/Cas responses
Published in Cell research (01-10-2016)“…Dear Editor, CRISPR/Cas systems are widespread RNA-mediated prokaryotic adaptive immune systems providing protection against invading nucleic acids . However,…”
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8
Crystal structure of Cas1 in complex with branched DNA
Published in Science China. Life sciences (01-04-2020)“…Cas1 is a key component of the CRISPR adaptation complex, which captures and integrates foreign DNA into the CRISPR array, resulting in the generation of new…”
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The Molecular Architecture for RNA-Guided RNA Cleavage by Cas13a
Published in Cell (10-08-2017)“…Cas13a, a type VI-A CRISPR-Cas RNA-guided RNA ribonuclease, degrades invasive RNAs targeted by CRISPR RNA (crRNA) and has potential applications in RNA…”
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10
Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems
Published in Cell (05-11-2015)“…Bacteria acquire memory of viral invaders by incorporating invasive DNA sequence elements into the host CRISPR locus, generating a new spacer within the CRISPR…”
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11
Two Distant Catalytic Sites Are Responsible for C2c2 RNase Activities
Published in Cell (12-01-2017)“…C2c2, the effector of type VI CRISPR-Cas systems, has two RNase activities—one for cutting its RNA target and the other for processing the CRISPR RNA (crRNA)…”
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12
C2c1-sgRNA Complex Structure Reveals RNA-Guided DNA Cleavage Mechanism
Published in Molecular cell (19-01-2017)“…C2c1 is a type V-B CRISPR-Cas system dual-RNA-guided DNA endonuclease. Here, we report the crystal structure of Alicyclobacillus acidoterrestris C2c1 in…”
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13
Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States
Published in Molecular cell (19-12-2019)“…High-resolution Cas9 structures have yet to reveal catalytic conformations due to HNH nuclease domain positioning away from the cleavage site. Nme1Cas9 and…”
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14
Anti-CRISPR AcrIIC5 is a dsDNA mimic that inhibits type II-C Cas9 effectors by blocking PAM recognition
Published in Nucleic acids research (28-02-2023)“…Anti-CRISPR proteins are encoded by phages to inhibit the CRISPR-Cas systems of the hosts. AcrIIC5 inhibits several naturally high-fidelity type II-C Cas9…”
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15
AcrIIC4 inhibits type II-C Cas9 by preventing R-loop formation
Published in Proceedings of the National Academy of Sciences - PNAS (01-08-2023)“…Anti-CRISPR (Acr) proteins are encoded by phages and other mobile genetic elements and inhibit host CRISPR-Cas immunity using versatile strategies. AcrIIC4 is…”
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16
An anti-CRISPR that pulls apart a CRISPR–Cas complex
Published in Nature (London) (08-08-2024)“…In biological systems, the activities of macromolecular complexes must sometimes be turned off. Thus, a wide variety of protein inhibitors has evolved for this…”
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Control-oriented planning and development-oriented planning: comparison of planning paradigms and practice in Hubei, China
Published in Frontiers of Urban and Rural Planning (22-01-2024)“…Abstract The history of planning development in various countries shows that the core logic of planning is the spiral interweaving of control and development,…”
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18
Pathogen protein modularity enables elaborate mimicry of a host phosphatase
Published in Cell (20-07-2023)“…Pathogens produce diverse effector proteins to manipulate host cellular processes. However, how functional diversity is generated in an effector repertoire is…”
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Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes
Published in Nucleic acids research (06-09-2017)“…We have undertaken a systematic structural study of Thermus thermophilus Argonaute (TtAgo) ternary complexes containing single-base bulges positioned either…”
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