Search Results - "Wagner, Sophia"

Innovation ecosystems as a service: Exploring the dynamics between corporates & start-ups in the context of a corporate coworking space by Aumüller-Wagner, Sophia, Baka, Vasiliki

“…The desire to create innovative organizational spaces has led to various instantiations of innovation ecosystems. Towards this direction, there is a growing…”
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The future landscape of large language models in medicine by Clusmann, Jan, Kolbinger, Fiona R., Muti, Hannah Sophie, Carrero, Zunamys I., Eckardt, Jan-Niklas, Laleh, Narmin Ghaffari, Löffler, Chiara Maria Lavinia, Schwarzkopf, Sophie-Caroline, Unger, Michaela, Veldhuizen, Gregory P., Wagner, Sophia J., Kather, Jakob Nikolas

“…Large language models (LLMs) are artificial intelligence (AI) tools specifically trained to process and generate text. LLMs attracted substantial public…”
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The native microbiome of the nematode Caenorhabditis elegans: gateway to a new host-microbiome model by Dirksen, Philipp, Marsh, Sarah Arnaud, Braker, Ines, Heitland, Nele, Wagner, Sophia, Nakad, Rania, Mader, Sebastian, Petersen, Carola, Kowallik, Vienna, Rosenstiel, Philip, Félix, Marie-Anne, Schulenburg, Hinrich

“…Host-microbe associations underlie many key processes of host development, immunity, and life history. Yet, none of the current research on the central model…”
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Transformer-based biomarker prediction from colorectal cancer histology: A large-scale multicentric study by Wagner, Sophia J., Reisenbüchler, Daniel, West, Nicholas P., Niehues, Jan Moritz, Zhu, Jiefu, Foersch, Sebastian, Veldhuizen, Gregory Patrick, Quirke, Philip, Grabsch, Heike I., van den Brandt, Piet A., Hutchins, Gordon G.A., Richman, Susan D., Yuan, Tanwei, Langer, Rupert, Jenniskens, Josien C.A., Offermans, Kelly, Mueller, Wolfram, Gray, Richard, Gruber, Stephen B., Greenson, Joel K., Rennert, Gad, Bonner, Joseph D., Schmolze, Daniel, Jonnagaddala, Jitendra, Hawkins, Nicholas J., Ward, Robyn L., Morton, Dion, Seymour, Matthew, Magill, Laura, Nowak, Marta, Hay, Jennifer, Koelzer, Viktor H., Church, David N., Church, David, Domingo, Enric, Edwards, Joanne, Glimelius, Bengt, Gogenur, Ismail, Harkin, Andrea, Hay, Jen, Iveson, Timothy, Jaeger, Emma, Kelly, Caroline, Kerr, Rachel, Maka, Noori, Morgan, Hannah, Oien, Karin, Orange, Clare, Palles, Claire, Roxburgh, Campbell, Sansom, Owen, Saunders, Mark, Tomlinson, Ian, Matek, Christian, Geppert, Carol, Peng, Chaolong, Zhi, Cheng, Ouyang, Xiaoming, James, Jacqueline A., Loughrey, Maurice B., Salto-Tellez, Manuel, Brenner, Hermann, Hoffmeister, Michael, Truhn, Daniel, Schnabel, Julia A., Boxberg, Melanie, Peng, Tingying, Kather, Jakob Nikolas

“…Deep learning (DL) can accelerate the prediction of prognostic biomarkers from routine pathology slides in colorectal cancer (CRC). However, current approaches…”
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Make deep learning algorithms in computational pathology more reproducible and reusable by Wagner, Sophia J., Matek, Christian, Shetab Boushehri, Sayedali, Boxberg, Melanie, Lamm, Lorenz, Sadafi, Ario, Waibel, Dominik J. E., Marr, Carsten, Peng, Tingying

“…Greater emphasis on reproducibility and reusability will advance computational pathology quickly and sustainably, ultimately optimizing clinical workflows and…”
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Built to Last? Reproducibility and Reusability of Deep Learning Algorithms in Computational Pathology by Wagner, Sophia J, Matek, Christian, Shetab Boushehri, Sayedali, Boxberg, Melanie, Lamm, Lorenz, Sadafi, Ario, Winter, Dominik J E, Marr, Carsten, Peng, Tingying

“…Recent progress in computational pathology has been driven by deep learning. While code and data availability are essential to reproduce findings from…”
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From whole-slide image to biomarker prediction: end-to-end weakly supervised deep learning in computational pathology by El Nahhas, Omar S M, van Treeck, Marko, Wölflein, Georg, Unger, Michaela, Ligero, Marta, Lenz, Tim, Wagner, Sophia J, Hewitt, Katherine J, Khader, Firas, Foersch, Sebastian, Truhn, Daniel, Kather, Jakob Nikolas

“…Hematoxylin- and eosin-stained whole-slide images (WSIs) are the foundation of diagnosis of cancer. In recent years, development of deep learning-based methods…”
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Feasibility of transcutaneous auricular vagus nerve stimulation in treatment of drug resistant epilepsy: A multicenter prospective study by Sabers, Anne, Aumüller-Wagner, Sophia, Christensen, Lars Rune, Henning, Oliver, Kostov, Konstantin, Lossius, Morten, Majoie, Marian, Mertens, Ann, Nielsen, Lene, Vonck, Kristl, Wagner, Louis

“…•Long-term feasibility of transcutaneous auricular vagus nerve stimulation is modest.•Adherence to ta-VNS depends on the subject’s lifestyle and active…”
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Multi-Modality Microscopy Image Style Augmentation for Nuclei Segmentation by Liu, Ye, Wagner, Sophia J, Peng, Tingying

“…Annotating microscopy images for nuclei segmentation by medical experts is laborious and time-consuming. To leverage the few existing annotations, also across…”
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Approaching Peak Ground Truth by Kofler, Florian, Wahle, Johannes, Ezhov, Ivan, Wagner, Sophia J., Al-Maskari, Rami, Gryska, Emilia, Todorov, Mihail, Bukas, Christina, Meissen, Felix, Peng, Tingying, Erturk, Ali, Rueckert, Daniel, Heckemann, Rolf, Kirschke, Jan, Zimmer, Claus, Wiestler, Benedikt, Menze, Bjoern, Piraud, Marie

“…Machine learning models are typically evaluated by computing similarity with reference annotations and trained by maximizing similarity with such. Especially…”
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Curvature bounds on length-minimizing discs by Lytchak, Alexander, Wagner, Sophia

“…We show that a length-minimizing disk inherits the upper curvature bound of the target. As a consequence we prove that harmonic discs and ruled discs inherit…”
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Cryptic changes in immune response and fitness in Tribolium castaneum as a consequence of coevolution with Beauveria bassiana by Rafaluk-Mohr, Charlotte, Wagner, Sophia, Joop, Gerrit

“…[Display omitted] •Phenoloxidase activity is specifically upregulated under certain conditions as a consequence of host-parasite coevolution.•No changes in…”
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Antagonistic species interaction drives selection for sex in a predator–prey system by Koch, Hanna R., Wagner, Sophia, Becks, Lutz

“…The evolutionary maintenance of sexual reproduction has long challenged biologists as the majority of species reproduce sexually despite inherent costs…”
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Low-Resource Finetuning of Foundation Models Beats State-of-the-Art in Histopathology by Roth, Benedikt, Koch, Valentin, Wagner, Sophia J., Schnabel, Julia A., Marr, Carsten, Peng, Tingying

“…To handle the large scale of whole slide images in computational pathology, most approaches first tessellate the images into smaller patches, extract features…”
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Using histopathology latent diffusion models as privacy-preserving dataset augmenters improves downstream classification performance by Niehues, Jan M., Müller-Franzes, Gustav, Schirris, Yoni, Wagner, Sophia Janine, Jendrusch, Michael, Kloor, Matthias, Pearson, Alexander T., Muti, Hannah Sophie, Hewitt, Katherine J., Veldhuizen, Gregory P., Zigutyte, Laura, Truhn, Daniel, Kather, Jakob Nikolas

“…Latent diffusion models (LDMs) have emerged as a state-of-the-art image generation method, outperforming previous Generative Adversarial Networks (GANs) in…”
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Predictors of haemodynamic structural valve deterioration following transcatheter aortic valve implantation with latest-generation balloon-expandable valves by Rheude, Tobias, Pellegrini, Costanza, Cassese, Salvatore, Wiebe, Jens, Wagner, Sophia, Trenkwalder, Teresa, Alvarez, Hector, Mayr, N Patrick, Hengstenberg, Christian, Schunkert, Heribert, Kastrati, Adnan, Husser, Oliver, Joner, Michael

“…Elevated gradients have been proposed to be associated with haemodynamic structural valve deterioration (SVD) after transcatheter aortic valve implantation…”
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TCT-713 Hemodynamic Valve Dysfunction Following Transcatheter Aortic Valve Implantation: Prevalence and Predictors of Elevated Transvalvular Gradients by Rheude, Tobias, Pellegrini, Costanza, Cassese, Salvatore, Wiebe, Jens, Wagner, Sophia, Michel, Jonathan, Rumpf, Moritz, Trenkwalder, Teresa, Alvarez, Hector, Mayr, N. Patrick, Hengstenberg, Christian, Kasel, Markus, Schunkert, Heribert, Kastrati, Adnan, Husser, Oliver, Joner, Michael

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Curvature bounds on length-minimizing discs by Lytchak, Alexander, Wagner, Sophia

“…We show that a length-minimizing disk inherites the upper curvature bound of the target. As a consequence we prove that harmonic discs and ruled discs inherit…”
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Multi-Modality Microscopy Image Style Transfer for Nuclei Segmentation by Liu, Ye, Wagner, Sophia J, Peng, Tingying

“…Annotating microscopy images for nuclei segmentation is laborious and time-consuming. To leverage the few existing annotations, also across multiple…”
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Local Attention Graph-based Transformer for Multi-target Genetic Alteration Prediction by Reisenbüchler, Daniel, Wagner, Sophia J, Boxberg, Melanie, Peng, Tingying

“…Classical multiple instance learning (MIL) methods are often based on the identical and independent distributed assumption between instances, hence neglecting…”
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