Search Results - "WASSENAAR, Trudy M"

Decoding the epitranscriptional landscape from native RNA sequences by Jenjaroenpun, Piroon, Wongsurawat, Thidathip, Wadley, Taylor D, Wassenaar, Trudy M, Liu, Jun, Dai, Qing, Wanchai, Visanu, Akel, Nisreen S, Jamshidi-Parsian, Azemat, Franco, Aime T, Boysen, Gunnar, Jennings, Michael L, Ussery, David W, He, Chuan, Nookaew, Intawat

“…Abstract Traditional epitranscriptomics relies on capturing a single RNA modification by antibody or chemical treatment, combined with short-read sequencing to…”
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Comparison of Monkeypox virus genomes from the 2017 Nigeria outbreak and the 2022 outbreak by Wassenaar, Trudy M., Wanchai, Visanu, Ussery, David W.

“…Aims The current Monkeypox virus (MPX) outbreak is not only the largest known outbreak to date caused by a strain belonging to the West‐African clade, but also…”
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Case of Microcephaly after Congenital Infection with Asian Lineage Zika Virus, Thailand by Wongsurawat, Thidathip, Athipanyasilp, Niracha, Jenjaroenpun, Piroon, Jun, Se-Ran, Kaewnapan, Bualan, Wassenaar, Trudy M, Leelahakorn, Nuttawut, Angkasekwinai, Nasikarn, Kantakamalakul, Wannee, Ussery, David W, Sutthent, Ruengpung, Nookaew, Intawat, Horthongkham, Navin

“…We sequenced the virus genomes from 3 pregnant women in Thailand with Zika virus diagnoses. All had infections with the Asian lineage. The woman infected at…”
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A secreted antibacterial neuropeptide shapes the microbiome of Hydra by Augustin, René, Schröder, Katja, Murillo Rincón, Andrea P., Fraune, Sebastian, Anton-Erxleben, Friederike, Herbst, Eva-Maria, Wittlieb, Jörg, Schwentner, Martin, Grötzinger, Joachim, Wassenaar, Trudy M., Bosch, Thomas C. G.

“…Colonization of body epithelial surfaces with a highly specific microbial community is a fundamental feature of all animals, yet the underlying mechanisms by…”
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Interactions between the Gut Microbiome, Lung Conditions, and Coronary Heart Disease and How Probiotics Affect These by Wassenaar, Trudy M., Juncos, Valentina A., Zimmermann, Kurt

“…The importance of a healthy microbiome cannot be overemphasized. Disturbances in its composition can lead to a variety of symptoms that can extend to other…”
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Suggested mechanisms for Zika virus causing microcephaly: what do the genomes tell us? by Jun, Se-Ran, Wassenaar, Trudy M, Wanchai, Visanu, Patumcharoenpol, Preecha, Nookaew, Intawat, Ussery, David W

“…Zika virus (ZIKV) is an emerging human pathogen. Since its arrival in the Western hemisphere, from Africa via Asia, it has become a serious threat to pregnant…”
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Diversity of Pseudomonas Genomes, Including Populus-Associated Isolates, as Revealed by Comparative Genome Analysis by Jun, Se-Ran, Wassenaar, Trudy M, Nookaew, Intawat, Hauser, Loren, Wanchai, Visanu, Land, Miriam, Timm, Collin M, Lu, Tse-Yuan S, Schadt, Christopher W, Doktycz, Mitchel J, Pelletier, Dale A, Ussery, David W

“…The Pseudomonas genus contains a metabolically versatile group of organisms that are known to occupy numerous ecological niches, including the rhizosphere and…”
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Mash-based analyses of Escherichia coli genomes reveal 14 distinct phylogroups by Abram, Kaleb, Udaondo, Zulema, Bleker, Carissa, Wanchai, Visanu, Wassenaar, Trudy M., Robeson, Michael S., Ussery, David W.

“…In this study, more than one hundred thousand Escherichia coli and Shigella genomes were examined and classified. This is, to our knowledge, the largest E…”
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Comparison of 61 Sequenced Escherichia coli Genomes by LUKJANCENKO, Oksana, WASSENAAR, Trudy M, USSERY, David W

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E. coli and colorectal cancer: a complex relationship that deserves a critical mindset by Wassenaar, Trudy M

“…To the multiple factors that may eventually result in colorectal cancer (CRC), strains of E. coli have now been added, in particular strains producing…”
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The qacC Gene Has Recently Spread between Rolling Circle Plasmids of Staphylococcus , Indicative of a Novel Gene Transfer Mechanism by Wassenaar, Trudy M, Ussery, David W, Ingmer, Hanne

“…Resistance of species to quaternary ammonium compounds, frequently used as disinfectants and biocides, can be attributed to genes. Most gene products belong to…”
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DNA structural features and variability of complete MHC locus sequences by Wassenaar, Trudy M, Harville, Terry, Chastain, Jonathan, Wanchai, Visanu, Ussery, David W

“…The major histocompatibility (MHC) locus, also known as the Human Leukocyte Antigen (HLA) genes, is located on the short arm of chromosome 6, and contains…”
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Safety aspects and implications of regulation of probiotic bacteria in food and food supplements by Wassenaar, Trudy M, Klein, Günter

“…The application of living bacteria as probiotics in food or food supplements requires a careful safety assessment. This review summarizes key issues concerning…”
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Genomic characterization of Campylobacter jejuni strain M1 by Friis, Carsten, Wassenaar, Trudy M, Javed, Muhammad A, Snipen, Lars, Lagesen, Karin, Hallin, Peter F, Newell, Diane G, Toszeghy, Monique, Ridley, Anne, Manning, Georgina, Ussery, David W

“…Campylobacter jejuni strain M1 (laboratory designation 99/308) is a rarely documented case of direct transmission of C. jejuni from chicken to a person,…”
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In silico Selection of Amplification Targets for Rapid Polymorphism Screening in Ebola Virus Outbreaks by Wassenaar, Trudy M, Wanchai, Visanu, Buzard, Gregory S, Ussery, David W

“…To achieve maximum transmission chain tracking in the current Ebola outbreak, whole genome sequencing (WGS) has been proposed to provide optimal information…”
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Phage therapy reduces Campylobacter jejuni colonization in broilers by Wagenaar, Jaap A., Bergen, Marcel A.P. Van, Mueller, Mark A., Wassenaar, Trudy M., Carlton, Richard M.

“…The effect of phage therapy in the control of Campylobacter jejuni colonization in young broilers, either as a preventive or a therapeutic measure, was tested…”
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Comparative genomics of hepatitis A virus, hepatitis C virus, and hepatitis E virus provides insights into the evolutionary history of Hepatovirus species by Wassenaar, Trudy M., Jun, Se‐Ran, Robeson, Michael, Ussery, David W.

“…The intraspecies genomic diversity of the single‐strand RNA (+) virus species hepatitis A virus (Hepatovirus), hepatitis C virus (Hepacivirus), and hepatitis E…”
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Insights from 100 Years of Research with Probiotic E. Coli by Wassenaar, Trudy M

“…A century ago, Alfred Nissle discovered that intentional intake of particular strains of could treat patients suffering from infectious diseases. Since then,…”
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Evolutionary implications of microbial genome tetranucleotide frequency biases by Pride, David T, Meinersmann, Richard J, Wassenaar, Trudy M, Blaser, Martin J

“…We compared nucleotide usage pattern conservation for related prokaryotes by examining the representation of DNA tetranucleotide combinations in 27…”
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Use of antimicrobial agents in veterinary medicine and implications for human health by Wassenaar, Trudy M

“…This review discusses why veterinary usage of antimicrobial agents is wrongly accused of causing a substantial part of the problem of resistant human…”
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