Search Results - "Vogel, John"

Transcriptomic analysis of field-droughted sorghum from seedling to maturity reveals biotic and metabolic responses by Varoquaux, Nelle, Cole, Benjamin, Gao, Cheng, Pierroz, Grady, Baker, Christopher R., Patel, Dhruv, Madera, Mary, Jeffers, Tim, Hollingsworth, Joy, Sievert, Julie, Yoshinaga, Yuko, Owiti, Judith A., Singan, Vasanth R., DeGraaf, Stephanie, Xu, Ling, Blow, Matthew J., Harrison, Maria J., Visel, Axel, Jansson, Christer, Niyogi, Krishna K., Hutmacher, Robert, Coleman-Derr, Devin, O’Malley, Ronan C., Taylor, John W., Dahlberg, Jeffery, Vogel, John P., Lemaux, Peggy G., Purdom, Elizabeth

“…Drought is the most important environmental stress limiting crop yields. The C4 cereal sorghum [Sorghum bicolor (L.) Moench] is a critical food, forage, and…”
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A truncated NLR protein, TIR-NBS2, is required for activated defense responses in the exo70B1 mutant by Zhao, Ting, Rui, Lu, Li, Juan, Nishimura, Marc T, Vogel, John P, Liu, Na, Liu, Simu, Zhao, Yaofei, Dangl, Jeffery L, Tang, Dingzhong

“…During exocytosis, the evolutionarily conserved exocyst complex tethers Golgi-derived vesicles to the target plasma membrane, a critical function for secretory…”
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Division in PIN-Mediated Auxin Patterning during Organ Initiation in Grasses by O'Connor, Devin L, Runions, Adam, Sluis, Aaron, Bragg, Jennifer, Vogel, John P, Prusinkiewicz, Przemyslaw, Hake, Sarah, Vernoux, Teva

“…The hormone auxin plays a crucial role in plant morphogenesis. In the shoot apical meristem, the PIN-FORMED1 (PIN1) efflux carrier concentrates auxin into…”
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Grasses use an alternatively wired bHLH transcription factor network to establish stomatal identity by Raissig, Michael T., Abrash, Emily, Bettadapur, Akhila, Vogel, John P., Bergmann, Dominique C.

“…Stomata, epidermal valves facilitating plant–atmosphere gas exchange, represent a powerful model for understanding cell fate and pattern in plants. Core basic…”
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Advances on genomics, biology, ecology and evolution of Brachypodium, a bridging model grass system for cereals and biofuel grasses by Catalán, Pilar, Vogel, John

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Plant Pan-Genomics Comes of Age by Lei, Li, Goltsman, Eugene, Goodstein, David, Wu, Guohong Albert, Rokhsar, Daniel S, Vogel, John P

“…A pan-genome is the nonredundant collection of genes and or DNA sequences in a species. Numerous studies have shown that plant pan-genomes are typically much…”
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Enhancers in Plant Development, Adaptation, and Evolution by Beernink, Bliss M, Vogel, John P, Lei, Li

“…Understanding plant responses to developmental and environmental cues is crucial for studying morphological divergence and local adaptation. Gene expression…”
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Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors by Gordon, Sean P., Contreras-Moreira, Bruno, Levy, Joshua J., Djamei, Armin, Czedik-Eysenberg, Angelika, Tartaglio, Virginia S., Session, Adam, Martin, Joel, Cartwright, Amy, Katz, Andrew, Singan, Vasanth R., Goltsman, Eugene, Barry, Kerrie, Dinh-Thi, Vinh Ha, Chalhoub, Boulos, Diaz-Perez, Antonio, Sancho, Ruben, Lusinska, Joanna, Wolny, Elzbieta, Nibau, Candida, Doonan, John H., Mur, Luis A. J., Plott, Chris, Jenkins, Jerry, Hazen, Samuel P., Lee, Scott J., Shu, Shengqiang, Goodstein, David, Rokhsar, Daniel, Schmutz, Jeremy, Hasterok, Robert, Catalan, Pilar, Vogel, John P.

“…Our understanding of polyploid genome evolution is constrained because we cannot know the exact founders of a particular polyploid. To differentiate between…”
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Brachypodium distachyon and Setaria viridis: Model Genetic Systems for the Grasses by Brutnell, Thomas P, Bennetzen, Jeffrey L, Vogel, John P

“…The family of grasses encompasses the world's most important food, feed, and bioenergy crops, yet we are only now beginning to develop the genetic resources to…”
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PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon by Woods, Daniel P, Li, Weiya, Sibout, Richard, Shao, Mingqin, Laudencia-Chingcuanco, Debbie, Vogel, John P, Dubcovsky, Jorge, Amasino, Richard M

“…Daylength sensing in many plants is critical for coordinating the timing of flowering with the appropriate season. Temperate climate-adapted grasses such as…”
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Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure by Gordon, Sean P., Contreras-Moreira, Bruno, Woods, Daniel P., Des Marais, David L., Burgess, Diane, Shu, Shengqiang, Stritt, Christoph, Roulin, Anne C., Schackwitz, Wendy, Tyler, Ludmila, Martin, Joel, Lipzen, Anna, Dochy, Niklas, Phillips, Jeremy, Barry, Kerrie, Geuten, Koen, Budak, Hikmet, Juenger, Thomas E., Amasino, Richard, Caicedo, Ana L., Goodstein, David, Davidson, Patrick, Mur, Luis A. J., Figueroa, Melania, Freeling, Michael, Catalan, Pilar, Vogel, John P.

“…While prokaryotic pan-genomes have been shown to contain many more genes than any individual organism, the prevalence and functional significance of…”
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High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3 by Vogel, John, Hill, Theresa

“…Brachypodium distachyon (Brachypodium) is a small grass with biological attributes (rapid generation time, small genome, diploid accessions, small stature and…”
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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities by Gao, Cheng, Xu, Ling, Montoya, Liliam, Madera, Mary, Hollingsworth, Joy, Chen, Liang, Purdom, Elizabeth, Singan, Vasanth, Vogel, John, Hutmacher, Robert B., Dahlberg, Jeffery A., Coleman-Derr, Devin, Lemaux, Peggy G., Taylor, John W.

“…Plant response to drought stress involves fungi and bacteria that live on and in plants and in the rhizosphere, yet the stability of these myco- and…”
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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics by Gao, Cheng, Montoya, Liliam, Xu, Ling, Madera, Mary, Hollingsworth, Joy, Purdom, Elizabeth, Singan, Vasanth, Vogel, John, Hutmacher, Robert B., Dahlberg, Jeffery A., Coleman-Derr, Devin, Lemaux, Peggy G., Taylor, John W.

“…Community assembly of crop-associated fungi is thought to be strongly influenced by deterministic selection exerted by the plant host, rather than stochastic…”
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Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata by Raissig, Michael T., Matos, Juliana L., Gil, M. Ximena Anleu, Kornfeld, Ari, Bettadapur, Akhila, Abrash, Emily, Allison, Hannah R., Badgley, Grayson, Vogel, John P., Berry, Joseph A., Bergmann, Dominique C.

“…Plants optimize carbon assimilation while limiting water loss by adjusting stomatal aperture. In grasses, a developmental innovation—the addition of subsidiary…”
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Impacts of Maize Domestication and Breeding on Rhizosphere Microbial Community Recruitment from a Nutrient Depleted Agricultural Soil by Brisson, Vanessa L., Schmidt, Jennifer E., Northen, Trent R., Vogel, John P., Gaudin, Amélie C. M.

“…Maize domestication and breeding have resulted in drastic and well documented changes in aboveground traits, but belowground effects on root system functioning…”
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Comparative plastome genomics and phylogenomics of Brachypodium: flowering time signatures, introgression and recombination in recently diverged ecotypes by Sancho, Rubén, Cantalapiedra, Carlos P, López-Alvarez, Diana, Gordon, Sean P, Vogel, John P, Catalán, Pilar, Contreras-Moreira, Bruno

“…Few pan-genomic studies have been conducted in plants, and none of them have focused on the intraspecific diversity and evolution of their plastid genomes. We…”
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Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon by Thieme, Michael, Minadakis, Nikolaos, Himber, Christophe, Keller, Bettina, Xu, Wenbo, Rutowicz, Kinga, Matteoli, Calvin, Böhrer, Marcel, Rymen, Bart, Laudencia-Chingcuanco, Debbie, Vogel, John P, Sibout, Richard, Stritt, Christoph, Blevins, Todd, Roulin, Anne C

“…Long terminal repeat retrotransposons (LTR-RTs) are powerful mutagens regarded as a major source of genetic novelty and important drivers of evolution. Yet,…”
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Pain specialist management of sexual pain-III. Neuromodulation by Vogel, John J

“…Some women with sexual pain do not respond to conservative multi-modal care modalities. Neuromodulation is a group of methods which alter nerve activity by…”
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Pain specialist management of sexual pain-II. Interventional by Vogel, John J

“…Treatment of female sexual pain often requires the use of diverse modalities crossing multiple medical disciplines. Interventional procedures are important in…”
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