Search Results - "Vinje, Marcus A"

Evaluation and selection of internal reference genes from two- and six-row U.S. malting barley varieties throughout micromalting for use in RT-qPCR by Walling, Jason G, Zalapa, Leslie A, Vinje, Marcus A

“…Reverse transcription quantitative polymerase chain reaction (RT-qPCR) is a popular method for measuring transcript abundance. The most commonly used method of…”
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Identification of Genomic Loci Controlling Grain Macro and Micronutrient Variation in a Wild Barley (Hordeum vulgare spp. spontaneum) Diversity Panel by Abendroth, Jillian A., Sallam, Ahmad H., Steffenson, Brian J., Vinje, Marcus A., Mahalingam, Ramamurthy, Walling, Jason G.

“…Nutrient deficiencies in humans are problematic on a global scale but are more prevalent in regions where high-quality and nutrient-dense foods are scarce…”
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Characterization of barley (Horduem vulgare) lys3 mutants identifies genes under the regulation of the prolamin-box binding transcription factor and elucidates its role in endosperm promoter methylation during grain development by Vinje, Marcus A., Simmons, Carl H.

“…Barley ranks fourth in global cereal production and is primarily grown for animal feed and malt. Hordeins, the principal barley seed storage proteins, are…”
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Characterization of a near isogenic barley line with high grain β-amylase activity reveals a separation in the tight co-regulation of B-hordeins (Hor2) with endosperm-specific β-amylase (Bmy1) by Vinje, Marcus A., Gartman, Logan S., Simmons, Carl H.

“…[Display omitted] •Description of GSHO 2096, a barley line with very high grain β-amylase activity.•High grain β-amylase activity caused by Bmy1 upregulation…”
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Comparative gene expression analysis of the β-amylase and hordein gene families in the developing barley grain by Vinje, Marcus A., Walling, Jason G., Henson, Cynthia A., Duke, Stanley H.

“…Expression of hordeins and β-amylase during barley grain development is important in determining malting quality parameters that are controlled by protein and…”
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Description and functional analysis of the transcriptome from malting barley by Vinje, Marcus A., Henson, Cynthia A., Duke, Stanley H., Simmons, Carl H., Le, Khoa, Hall, Evan, Hirsch, Cory D.

“…The present study aimed to establish an early model of the malting barley transcriptome, which describes the expression of genes and their ontologies, identify…”
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Corrigendum to “Description and functional analysis of the transcriptome from malting barley” [Genomics 113 (2021) 3310–3324] by Vinje, Marcus A., Henson, Cynthia A., Duke, Stanley H., Simmons, Carl H., Le, Khoa, Hall, Evan, Hirsch, Cory D.

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Exogenous spike-in mouse RNAs for accurate differential gene expression analysis in barley using RT-qPCR by Vinje, Marcus A, Friedman, David A

“…Abstract Reverse transcriptase quantitative polymerase chain reaction (RT-qPCR) followed by the 2−ΔΔCt method is the most common way to measure transcript…”
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Differential expression of two β-amylase genes (Bmy1 and Bmy2) in developing and mature barley grain by Vinje, Marcus A, Willis, David K, Duke, Stanley H, Henson, Cynthia A

“…Two barley (Hordeum vulgare L.) β-amylase genes (Bmy1 and Bmy2) were studied during the late maturation phase of grain development in four genotypes. The Bmy1…”
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Differential RNA expression of Bmy1 during barley seed development and the association with β-amylase accumulation, activity, and total protein by Vinje, Marcus A., Willis, David K., Duke, Stanley H., Henson, Cynthia A.

“…The objective of this study was to determine if developing barley ( Hordeum vulgare L.) seeds had differences in β-amylase 1 ( Bmy1) mRNA accumulation,…”
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Utilization of Different Bmy1 Intron III Alleles for Predicting β-Amylase Activity and Thermostability in Wild and Cultivated Barley by Vinje, Marcus A, Duke, Stanley H, Henson, Cynthia A

“…The third intron of barley (Hordeum vulgare L.) β-amylase 1 (Bmy1) is extremely polymorphic. The use of specific insertion/deletions (indels) in the third…”
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Quantitative trait loci impacting grain β‐glucan content in wild barley (Hordeum vulgare ssp. spontaneum) reveals genes associated with cell wall modification and carbohydrate metabolism by Walling, Jason G., Sallam, Ahmad H., Steffenson, Brian J., Henson, Cynthia, Vinje, Marcus A., Mahalingam, Ramamurthy

“…Barley (Hordeum vulgare L.) seeds are a rich source of β‐glucans that can help reduce blood serum cholesterol content in human diets. However, high levels of…”
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Field Application of Benzothiadiazole (BTH) to Oats (Avena sativa): Effects on Crown Rust Resistance and Avenanthramide Production by Wise, Mitchell L., Vinje, Marcus A., Conley, Shawn P.

“…Avenanthramides are phenolic antioxidants produced in oat (Avena sativa L.) in response to fungal infection and, as shown in greenhouse experiments, by…”
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Differential expression of two [beta]-amylase genes (Bmy1 and Bmy2) in developing and mature barley grain by Vinje, Marcus A, Willis, David K, Duke, Stanley H, Henson, Cynthia A

“…Two barley (Hordeum vulgare L.) β-amylase genes (Bmy1 and Bmy2) were studied during the late maturation phase of grain development in four genotypes. The Bmy1…”
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Genotypic and phenotypic variation in β-amylases from cultivated and wild barleys by Vinje, Marcus A

“…Barley (Hordeum vulgare L.) β-amylase is encoded by two genes; an endosperm-specific gene (Bmy1) and a ubiquitous gene (Bmy2). Markers based on polymorphisms…”
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Genotypic and phenotypic variation in beta-amylases from cultivated and wild barleys by Vinje, Marcus A

“…Barley (Hordeum vulgare L.) beta-amylase is encoded by two genes; an endosperm-specific gene (Bmy1) and a ubiquitous gene (Bmy2). Markers based on…”
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