Search Results - "Vassura, Marco"

Blurring contact maps of thousands of proteins: what we can learn by reconstructing 3D structure by Vassura, Marco, Di Lena, Pietro, Margara, Luciano, Mirto, Maria, Aloisio, Giovanni, Fariselli, Piero, Casadio, Rita

“…The present knowledge of protein structures at atomic level derives from some 60,000 molecules. Yet the exponential ever growing set of hypothetical protein…”
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On the Reconstruction of Three-dimensional Protein Structures from Contact Maps by Di Lena, Pietro, Vassura, Marco, Margara, Luciano, Fariselli, Piero, Casadio, Rita

“…The problem of protein structure prediction is one of the long-standing goals of Computational Biology. Although we are still not able to provide first…”
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Correlating disease-related mutations to their effect on protein stability: A large-scale analysis of the human proteome by Casadio, Rita, Vassura, Marco, Tiwari, Shalinee, Fariselli, Piero, Luigi Martelli, Pier

“…Single residue mutations in proteins are known to affect protein stability and function. As a consequence, they can be disease associated. Available…”
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FT-COMAR: fault tolerant three-dimensional structure reconstruction from protein contact maps by Vassura, Marco, Margara, Luciano, Di Lena, Pietro, Medri, Filippo, Fariselli, Piero, Casadio, Rita

“…Fault Tolerant Contact Map Reconstruction (FT-COMAR) is a heuristic algorithm for the reconstruction of the protein three-dimensional structure from (possibly)…”
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Fast overlapping of protein contact maps by alignment of eigenvectors by Di Lena, Pietro, Fariselli, Piero, Margara, Luciano, Vassura, Marco, Casadio, Rita

“…Motivation: Searching for structural similarity is a key issue of protein functional annotation. The maximum contact map overlap (CMO) is one of the possible…”
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Reconstruction of 3D Structures From Protein Contact Maps by Vassura, M., Margara, L., Di Lena, P., Medri, F., Fariselli, P., Casadio, R.

“…The prediction of the protein tertiary structure from solely its residue sequence (the so called Protein Folding Problem) is one of the most challenging…”
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A graph theoretic approach to protein structure selection by Vassura, Marco, Margara, Luciano, Fariselli, Piero, Casadio, Rita

“…Summary Objective Protein structure prediction (PSP) aims to reconstruct the 3D structure of a given protein starting from its primary structure (chain of…”
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Is There an Optimal Substitution Matrix for Contact Prediction with Correlated Mutations? by Di Lena, P, Fariselli, P, Margara, L, Vassura, M, Casadio, R

“…Correlated mutations in proteins are believed to occur in order to preserve the protein functional folding through evolution. Their values can be deduced from…”
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