Search Results - "Vargas Honorato, Rodrigo"

ParKVFinder: A thread-level parallel approach in biomolecular cavity detection by Guerra, João Victor da Silva, Ribeiro Filho, Helder Veras, Bortot, Leandro Oliveira, Honorato, Rodrigo Vargas, Pereira, José Geraldo de Carvalho, Lopes-de-Oliveira, Paulo Sérgio

“…Biological processes are regulated mainly by the binding of small molecules into cavities distributed throughout the biomolecular structure. Computational…”
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Kinase inhibitor profile for human nek1, nek6, and nek7 and analysis of the structural basis for inhibitor specificity by Moraes, Eduardo Cruz, Meirelles, Gabriela Vaz, Honorato, Rodrigo Vargas, de Souza, Tatiana de Arruda Campos Brasil, de Souza, Edmarcia Elisa, Murakami, Mario Tyago, de Oliveira, Paulo Sergio Lopes, Kobarg, Jörg

“…Human Neks are a conserved protein kinase family related to cell cycle progression and cell division and are considered potential drug targets for the…”
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Structural analysis of intermolecular interactions in the kinesin adaptor complex fasciculation and elongation protein zeta 1/ short coiled-coil protein (FEZ1/SCOCO) by Alborghetti, Marcos Rodrigo, Furlan, Ariane da Silva, da Silva, Júlio César, Sforça, Maurício Luís, Honorato, Rodrigo Vargas, Granato, Daniela Campos, dos Santos Migueleti, Deivid Lucas, Neves, Jorge L, de Oliveira, Paulo Sergio Lopes, Paes-Leme, Adriana Franco, Zeri, Ana Carolina de Mattos, de Torriani, Iris Concepcion Linares, Kobarg, Jörg

“…Cytoskeleton and protein trafficking processes, including vesicle transport to synapses, are key processes in neuronal differentiation and axon outgrowth. The…”
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Structural Biology in the Clouds: The WeNMR-EOSC Ecosystem by Honorato, Rodrigo V., Koukos, Panagiotis I., Jiménez-García, Brian, Tsaregorodtsev, Andrei, Verlato, Marco, Giachetti, Andrea, Rosato, Antonio, Bonvin, Alexandre M. J. J.

“…Structural biology aims at characterizing the structural and dynamic properties of biological macromolecules at atomic details. Gaining insight into three…”
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Oligomerization as a strategy for cold adaptation: Structure and dynamics of the GH1 β-glucosidase from Exiguobacterium antarcticum B7 by Zanphorlin, Leticia Maria, de Giuseppe, Priscila Oliveira, Honorato, Rodrigo Vargas, Tonoli, Celisa Caldana Costa, Fattori, Juliana, Crespim, Elaine, de Oliveira, Paulo Sergio Lopes, Ruller, Roberto, Murakami, Mario Tyago

“…Psychrophilic enzymes evolved from a plethora of structural scaffolds via multiple molecular pathways. Elucidating their adaptive strategies is instrumental to…”
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Molecular Mechanisms Associated with Xylan Degradation by Xanthomonas Plant Pathogens by Santos, Camila Ramos, Hoffmam, Zaira Bruna, de Matos Martins, Vanesa Peixoto, Zanphorlin, Leticia Maria, de Paula Assis, Leandro Henrique, Honorato, Rodrigo Vargas, Lopes de Oliveira, Paulo Sérgio, Ruller, Roberto, Murakami, Mario Tyago

“…Xanthomonas pathogens attack a variety of economically relevant plants, and their xylan CUT system (carbohydrate utilization with TonB-dependent outer membrane…”
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Active Glutaminase C Self-assembles into a Supratetrameric Oligomer That Can Be Disrupted by an Allosteric Inhibitor by Ferreira, Amanda Petrina Scotá, Cassago, Alexandre, Gonçalves, Kaliandra de Almeida, Dias, Marília Meira, Adamoski, Douglas, Ascenção, Carolline Fernanda Rodrigues, Honorato, Rodrigo Vargas, de Oliveira, Juliana Ferreira, Ferreira, Igor Monteze, Fornezari, Camila, Bettini, Jefferson, Oliveira, Paulo Sérgio Lopes, Paes Leme, Adriana Franco, Portugal, Rodrigo Villares, Ambrosio, Andre Luis Berteli, Dias, Sandra Martha Gomes

“…The phosphate-dependent transition between enzymatically inert dimers into catalytically capable tetramers has long been the accepted mechanism for the…”
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Structural basis of exo-β-mannanase activity in the GH2 family by Domingues, Mariane Noronha, Souza, Flavio Henrique Moreira, Vieira, Plínio Salmazo, de Morais, Mariana Abrahão Bueno, Zanphorlin, Letícia Maria, dos Santos, Camila Ramos, Pirolla, Renan Augusto Siqueira, Honorato, Rodrigo Vargas, de Oliveira, Paulo Sergio Lopes, Gozzo, Fabio Cesar, Murakami, Mário Tyago

“…The classical microbial strategy for depolymerization of β-mannan polysaccharides involves the synergistic action of at least two enzymes,…”
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Pyrrole-indolinone SU11652 targets the nucleoside diphosphate kinase from Leishmania parasites by Vieira, Plínio Salmazo, Souza, Tatiana de Arruda Campos Brasil, Honorato, Rodrigo Vargas, Zanphorlin, Letícia Maria, Severiano, Kelven Ulisses, Rocco, Silvana Aparecida, de Oliveira, Arthur Henrique Cavalcante, Cordeiro, Artur Torres, Oliveira, Paulo Sérgio Lopes, de Giuseppe, Priscila Oliveira, Murakami, Mário Tyago

“…Nucleoside diphosphate kinases (NDKs) are key enzymes in the purine-salvage pathway of trypanosomatids and have been associated with the maintenance of…”
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Negative regulation of bacterial killing and inflammation by two novel CD16 ligands by Beppler, Jaqueline, Mkaddem, Sanae Ben, Michaloski, Jussara, Honorato, Rodrigo Vargas, Velasco, Irineu Tadeu, Oliveira, Paulo Sérgio Lopes, Giordano, Ricardo José, Monteiro, Renato C., Pinheiro da Silva, Fabiano

“…Sepsis, a leading cause of death worldwide, involves exacerbated proinflammatory responses and inefficient bacterial clearance. Phagocytic cells play a crucial…”
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Combining Mass Spectrometry Cross‐Linking, Molecular Docking and NMR Titration to Dissect ZapA‐FtsZ Protein Interaction by Nogueira, Maria Luiza Caldas, Sforça, Mauricio Luis, Leme, Adriana Franco Paes, Pauletti, Bianca Alves, de Oliveira, Paulo Sergio Lopes, Honorato, Rodrigo Vargas, King, Glenn F, Filho, Frederico José Gueiros, de Mattos Zeri, Ana Carolina

“…Abstract only The cell division is a key event in a bacteria cycle of life and in most rod shaped bacteria. This cell divion involves a septum formation. FtsZ…”
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Oligomerization as a strategy for cold adaptation: Structure and dynamics of the GH1 [beta]-glucosidase from Exiguobacterium antarcticum B7 by Zanphorlin, Leticia Maria, De Giuseppe, Priscila Oliveira, Honorato, Rodrigo Vargas, Tonoli, Celisa Caldana Costa, Fattori, Juliana, Crespim, Elaine, De Oliveira, Paulo Sergio Lopes, Ruller, Roberto, Murakami, Mario Tyago

“…Psychrophilic enzymes evolved from a plethora of structural scaffolds via multiple molecular pathways. Elucidating their adaptive strategies is instrumental to…”
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The mechanism by which a distinguishing arabinofuranosidase can cope with internal di-substitutions in arabinoxylans by Dos Santos, Camila Ramos, de Giuseppe, Priscila Oliveira, de Souza, Flávio Henrique Moreira, Zanphorlin, Letícia Maria, Domingues, Mariane Noronha, Pirolla, Renan Augusto Siqueira, Honorato, Rodrigo Vargas, Tonoli, Celisa Caldana Costa, de Morais, Mariana Abrahão Bueno, de Matos Martins, Vanesa Peixoto, Fonseca, Lucas Miranda, Büchli, Fernanda, de Oliveira, Paulo Sergio Lopes, Gozzo, Fábio Cesar, Murakami, Mário Tyago

“…Arabinoxylan is an abundant polysaccharide in industrially relevant biomasses such as sugarcane, corn stover and grasses. However, the arabinofuranosyl…”
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Structural biology in the clouds: The WeNMR-EOSC Ecosystem by Honorato, Rodrigo Vargas, Koukos, Panagiotis I, Jiménez-García, Brian, Tsaregorodtsev, Andrei, Verlato, Marco, Giachetti, Andrea, Rosato, Antonio, Bonvin, Alexandre M. J. J

“…Structural biology aims at characterizing the structural and dynamic properties of biological macromolecules at atomic details. Gaining insight into three…”
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