Search Results - "Van Der Lee, Theo A. J."

Correction: A target enrichment approach for enhanced recovery of Synchytrium endobioticum nuclear genome sequences by Nguyen, Hai D T, Ponomareva, Ekaterina, Dadej, Kasia, Smith, Donna, Antoun, Melissa, van der Lee, Theo A J, van de Vossenberg, Bart T L H

“…[This corrects the article DOI: 10.1371/journal.pone.0296842.]…”
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Mitochondrial genomes reveal recombination in the presumed asexual Fusarium oxysporum species complex by Brankovics, Balázs, van Dam, Peter, Rep, Martijn, de Hoog, G Sybren, J van der Lee, Theo A, Waalwijk, Cees, van Diepeningen, Anne D

“…The Fusarium oxysporum species complex (FOSC) contains several phylogenetic lineages. Phylogenetic studies identified two to three major clades within the…”
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GRAbB: Selective Assembly of Genomic Regions, a New Niche for Genomic Research by Brankovics, Balázs, Zhang, Hao, van Diepeningen, Anne D, van der Lee, Theo A J, Waalwijk, Cees, de Hoog, G Sybren

“…GRAbB (Genomic Region Assembly by Baiting) is a new program that is dedicated to assemble specific genomic regions from NGS data. This approach is especially…”
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New broad-spectrum resistance to septoria tritici blotch derived from synthetic hexaploid wheat by Tabib Ghaffary, S. Mahmod, Faris, Justin D, Friesen, Timothy L, Visser, Richard G. F, van der Lee, Theo A. J, Robert, Olivier, Kema, Gert H. J

“…Septoria tritici blotch (STB), caused by the ascomycete Mycosphaerella graminicola, is one of the most devastating foliar diseases of wheat. We screened five…”
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A gapless genome sequence of the fungus Botrytis cinerea by Van Kan, Jan A. L., Stassen, Joost H. M., Mosbach, Andreas, Van Der Lee, Theo A. J., Faino, Luigi, Farmer, Andrew D., Papasotiriou, Dimitrios G., Zhou, Shiguo, Seidl, Michael F., Cottam, Eleanor, Edel, Dominique, Hahn, Matthias, Schwartz, David C., Dietrich, Robert A., Widdison, Stephanie, Scalliet, Gabriel

“…Summary Following earlier incomplete and fragmented versions of a genome sequence for the grey mould Botrytis cinerea, a gapless, near‐finished genome sequence…”
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Classification of the plant-associated lifestyle of Pseudomonas strains using genome properties and machine learning by Poncheewin, Wasin, van Diepeningen, Anne D., van der Lee, Theo A. J., Suarez-Diez, Maria, Schaap, Peter J.

“…The rhizosphere, the region of soil surrounding roots of plants, is colonized by a unique population of Plant Growth Promoting Rhizobacteria (PGPR). Many…”
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A target enrichment approach for enhanced recovery of Synchytrium endobioticum nuclear genome sequences by Nguyen, Hai D T, Ponomareva, Ekaterina, Dadej, Kasia, Smith, Donna, Antoun, Melissa, van der Lee, Theo A J, van de Vossenberg, Bart T L H

“…Potato wart disease is caused by the obligate fungal pathogen Synchytrium endobioticum. DNA extraction from compost, purified spores and crude wart tissue…”
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Meiosis drives extraordinary genome plasticity in the haploid fungal plant pathogen Mycosphaerella graminicola by Wittenberg, A.H.J, Lee, T.A.J. van der, Ben M'Barek, S, Ware, S.B, Goodwin, S.B, Kilian, A, Visser, R.G.F, Kema, G.H.J, Schouten, H.J

“…Meiosis in the haploid plant-pathogenic fungus Mycosphaerella graminicola results in eight ascospores due to a mitotic division following the two meiotic…”
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Diagnosis of Fusarium Infections: Approaches to Identification by the Clinical Mycology Laboratory by van Diepeningen, Anne D., Brankovics, Balázs, Iltes, Jearidienne, van der Lee, Theo A. J., Waalwijk, Cees

“…Infections caused by the genus Fusarium have emerged over the past decades and range from onychomycosis and keratitis in healthy individuals to deep and…”
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Effector discovery in the fungal wheat pathogen Zymoseptoria tritici by Mirzadi Gohari, Amir, Ware, Sarah B, Wittenberg, Alexander H. J, Mehrabi, Rahim, Ben M'Barek, Sarrah, Verstappen, Els C. P, van der Lee, Theo A. J, Robert, Olivier, Schouten, Henk J, de Wit, Pierre P. J. G. M, Kema, Gert H. J

“…Fungal plant pathogens, such as Zymoseptoria tritici (formerly known as Mycosphaerella graminicola), secrete repertoires of effectors to facilitate infection…”
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Genetic analysis of resistance to septoria tritici blotch in the French winter wheat cultivars Balance and Apache by Tabib Ghaffary, Seyed Mahmod, Robert, Olivier, Laurent, Valerie, Lonnet, Philippe, Margalé, Eric, van der Lee, Theo A. J., Visser, Richard G. F., Kema, Gert H. J.

“…The ascomycete Mycosphaerella graminicola is the causal agent of septoria tritici blotch (STB), one of the most destructive foliar diseases of bread and durum…”
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Distribution of anticoagulant rodenticide resistance in Rattus norvegicus in the Netherlands according to Vkorc1 mutations by Meerburg, Bastiaan G, van Gent‐Pelzer, Marga PE, Schoelitsz, Bruce, van der Lee, Theo AJ

“…BACKGROUND: Rodenticide resistance to anticoagulants in Rattus norvegicus will lead to increased difficulties in combating these pest animals. Here, the…”
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An Efficient Triplex TaqMan Quantitative PCR to Detect a Blackleg-Causing Lineage of Pectobacterium brasiliense in Potato Based on a Pangenome Analysis by van der Lee, Theo A. J., van Gent-Pelzer, Marga P. E., Jonkheer, Eef M., Brankovics, Balázs, Houwers, Ilse M., van der Wolf, Jan M., Bonants, Peter J. M., van Duivenbode, Inge, Vreeburg, Robert A. M., Nas, Mathijs, Smit, Sandra

“…P. brasiliense is an important bacterial pathogen causing blackleg (BL) in potatoes. Nevertheless, P. brasiliense is often detected in seed lots that do not…”
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The Pectobacterium pangenome, with a focus on Pectobacterium brasiliense, shows a robust core and extensive exchange of genes from a shared gene pool by Jonkheer, Eef M, Brankovics, Balázs, Houwers, Ilse M, van der Wolf, Jan M, Bonants, Peter J M, Vreeburg, Robert A M, Bollema, Robert, de Haan, Jorn R, Berke, Lidija, Smit, Sandra, de Ridder, Dick, van der Lee, Theo A J

“…Bacterial plant pathogens of the Pectobacterium genus are responsible for a wide spectrum of diseases in plants, including important crops such as potato,…”
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Synchytrium endobioticum, the potato wart disease pathogen by Vossenberg, Bart. T. L. H., Prodhomme, Charlotte, Vossen, Jack H., Lee, Theo A. J.

“…Potato wart disease is considered one of the most important quarantine pests for cultivated potato and is caused by the obligate biotrophic chytrid fungus…”
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The Fusarium graminearum Histone Acetyltransferases Are Important for Morphogenesis, DON Biosynthesis, and Pathogenicity by Kong, Xiangjiu, van Diepeningen, Anne D, van der Lee, Theo A J, Waalwijk, Cees, Xu, Jingsheng, Xu, Jin, Zhang, Hao, Chen, Wanquan, Feng, Jie

“…Post-translational modifications of chromatin structure by histone acetyltransferase (HATs) play a central role in the regulation of gene expression and…”
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Evolution and Diversity of Biosynthetic Gene Clusters in Fusarium by Hoogendoorn, Koen, Barra, Lena, Waalwijk, Cees, Dickschat, Jeroen S, van der Lee, Theo A J, Medema, Marnix H

“…Plant pathogenic fungi in the genus cause severe damage to crops, resulting in great financial losses and health hazards. Specialized metabolites synthesized…”
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Population Genomic Analysis Reveals a Highly Conserved Mitochondrial Genome in Fusarium asiaticum by Yang, Meixin, Zhang, Hao, van der Lee, Theo A J, Waalwijk, Cees, van Diepeningen, Anne D, Feng, Jie, Brankovics, Balázs, Chen, Wanquan

“…is one of the pivotal members of the species complex (FGSC) causing Fusarium head blight (FHB) on wheat, barley and rice in large parts of Asia. Besides…”
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Large‐scale identification of rodenticide resistance in Rattus norvegicus and Mus musculus in the Netherlands based on Vkorc1 codon 139 mutations by Krijger, Inge M., Strating, Max, Gent‐Pelzer, Marga, Lee, Theo A.J., Burt, Sara A., Schroeten, Fleur H., Vries, Robin, Cock, Marieke, Maas, Miriam, Meerburg, Bastiaan G.

“…BACKGROUND Resistance to rodenticides has been reported globally and poses a considerable problem for efficacy in pest control. The most‐documented resistance…”
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Comparative genomics of chytrid fungi reveal insights into the obligate biotrophic and pathogenic lifestyle of Synchytrium endobioticum by van de Vossenberg, Bart T. L. H., Warris, Sven, Nguyen, Hai D. T., van Gent-Pelzer, Marga P. E., Joly, David L., van de Geest, Henri C., Bonants, Peter J. M., Smith, Donna S., Lévesque, C. André, van der Lee, Theo A. J.

“…Synchytrium endobioticum is an obligate biotrophic soilborne Chytridiomycota (chytrid) species that causes potato wart disease, and represents the most basal…”
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