Search Results - "Valliyodan, Babu"

A reference-grade wild soybean genome by Xie, Min, Chung, Claire Yik-Lok, Li, Man-Wah, Wong, Fuk-Ling, Wang, Xin, Liu, Ailin, Wang, Zhili, Leung, Alden King-Yung, Wong, Tin-Hang, Tong, Suk-Wah, Xiao, Zhixia, Fan, Kejing, Ng, Ming-Sin, Qi, Xinpeng, Yang, Linfeng, Deng, Tianquan, He, Lijuan, Chen, Lu, Fu, Aisi, Ding, Qiong, He, Junxian, Chung, Gyuhwa, Isobe, Sachiko, Tanabata, Takanari, Valliyodan, Babu, Nguyen, Henry T., Cannon, Steven B., Foyer, Christine H., Chan, Ting-Fung, Lam, Hon-Ming

“…Efficient crop improvement depends on the application of accurate genetic information contained in diverse germplasm resources. Here we report a…”
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Genetic diversity and genomic strategies for improving drought and waterlogging tolerance in soybeans by Valliyodan, Babu, Ye, Heng, Song, Li, Murphy, MacKensie, Shannon, J. Grover, Nguyen, Henry T.

“…Drought and its interaction with high temperature are the major abiotic stress factors affecting soybean yield and production stability. Ongoing climate…”
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Construction and comparison of three reference‐quality genome assemblies for soybean by Valliyodan, Babu, Cannon, Steven B., Bayer, Philipp E., Shu, Shengqiang, Brown, Anne V., Ren, Longhui, Jenkins, Jerry, Chung, Claire Y.‐L., Chan, Ting‐Fung, Daum, Christopher G., Plott, Christopher, Hastie, Alex, Baruch, Kobi, Barry, Kerrie W., Huang, Wei, Patil, Gunvant, Varshney, Rajeev K., Hu, Haifei, Batley, Jacqueline, Yuan, Yuxuan, Song, Qijian, Stupar, Robert M., Goodstein, David M., Stacey, Gary, Lam, Hon‐Ming, Jackson, Scott A., Schmutz, Jeremy, Grimwood, Jane, Edwards, David, Nguyen, Henry T.

“…Summary We report reference‐quality genome assemblies and annotations for two accessions of soybean (Glycine max) and for one accession of Glycine soja, the…”
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Soybean (Glycine max) Haplotype Map (GmHapMap): a universal resource for soybean translational and functional genomics by Torkamaneh, Davoud, Laroche, Jérôme, Valliyodan, Babu, O’Donoughue, Louise, Cober, Elroy, Rajcan, Istvan, Vilela Abdelnoor, Ricardo, Sreedasyam, Avinash, Schmutz, Jeremy, Nguyen, Henry T., Belzile, François

“…Summary Here, we describe a worldwide haplotype map for soybean (GmHapMap) constructed using whole‐genome sequence data for 1007 Glycine max accessions and…”
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A major natural genetic variation associated with root system architecture and plasticity improves waterlogging tolerance and yield in soybean by Ye, Heng, Song, Li, Chen, Huatao, Valliyodan, Babu, Cheng, Peng, Ali, Liakat, Vuong, Tri, Wu, Chengjun, Orlowski, John, Buckley, Blair, Chen, Pengyin, Shannon, J. Grover, Nguyen, Henry T.

“…Natural genetic variations in waterlogging tolerance are controlled by multiple genes mapped as quantitative trait loci (QTLs) in major crops, including…”
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Soybean (Glycine max) SWEET gene family: insights through comparative genomics, transcriptome profiling and whole genome re-sequence analysis by Patil, Gunvant, Valliyodan, Babu, Deshmukh, Rupesh, Prince, Silvas, Nicander, Bjorn, Zhao, Mingzhe, Sonah, Humira, Song, Li, Lin, Li, Chaudhary, Juhi, Liu, Yang, Joshi, Trupti, Xu, Dong, Nguyen, Henry T

“…SWEET (MtN3_saliva) domain proteins, a recently identified group of efflux transporters, play an indispensable role in sugar efflux, phloem loading,…”
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Understanding regulatory networks and engineering for enhanced drought tolerance in plants by Valliyodan, Babu, Nguyen, Henry T

“…Drought stress is one of the major limitations to crop productivity. To develop crop plants with enhanced tolerance of drought stress, a basic understanding of…”
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Whole-genome resequencing identifies quantitative trait loci associated with mycorrhizal colonization of soybean by Pawlowski, Michelle L., Vuong, Tri D., Valliyodan, Babu, Nguyen, Henry T., Hartman, Glen L.

“…Key message A whole-genome resequencing-derived SNP dataset identified six quantitative trait loci (QTL) significantly associated with colonization of soybean…”
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Haplotype mapping uncovers unexplored variation in wild and domesticated soybean at the major protein locus cqProt-003 by Marsh, Jacob I., Hu, Haifei, Petereit, Jakob, Bayer, Philipp E., Valliyodan, Babu, Batley, Jacqueline, Nguyen, Henry T., Edwards, David

“…Key message The major soy protein QTL, cqProt-003, was analysed for haplotype diversity and global distribution, and results indicate 304 bp deletion and…”
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Identification of new loci for salt tolerance in soybean by high-resolution genome-wide association mapping by Do, Tuyen D, Vuong, Tri D, Dunn, David, Clubb, Michael, Valliyodan, Babu, Patil, Gunvant, Chen, Pengyin, Xu, Dong, Nguyen, Henry T, Shannon, J Grover

“…Salinity is an abiotic stress that negatively affects soybean [Glycine max (L.) Merr.] seed yield. Although a major gene for salt tolerance was identified and…”
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Characterization of the XTH Gene Family: New Insight to the Roles in Soybean Flooding Tolerance by Song, Li, Valliyodan, Babu, Prince, Silvas, Wan, Jinrong, Nguyen, Henry T

“…Xyloglucan endotransglycosylases/hydrolases (XTHs) are a class of enzymes involved in the construction and remodeling of cellulose/xyloglucan crosslinks and…”
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Genome-wide transcriptome analysis of soybean primary root under varying water-deficit conditions by Song, Li, Prince, Silvas, Valliyodan, Babu, Joshi, Trupti, Maldonado dos Santos, Joao V, Wang, Jiaojiao, Lin, Li, Wan, Jinrong, Wang, Yongqin, Xu, Dong, Nguyen, Henry T

“…Soybean is a major crop that provides an important source of protein and oil to humans and animals, but its production can be dramatically decreased by the…”
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Adapting legume crops to climate change using genomic approaches by Mousavi‐Derazmahalleh, Mahsa, Bayer, Philipp E., Hane, James K., Valliyodan, Babu, Nguyen, Henry T., Nelson, Matthew N., Erskine, William, Varshney, Rajeev K., Papa, Roberto, Edwards, David

“…Our agricultural system and hence food security is threatened by combination of events, such as increasing population, the impacts of climate change, and the…”
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Genome sequence of the palaeopolyploid soybean by Schmutz, Jeremy, Cannon, Steven B, Schlueter, Jessica, Ma, Jianxin, Mitros, Therese, Nelson, William, Hyten, David L, Song, Qijian, Thelen, Jay J, Cheng, Jianlin, Xu, Dong, Hellsten, Uffe, Peto, Myron, Grant, David, Cregan, Perry, Shoemaker, Randy C

“…Soybean (Glycine max) is one of the most important crop plants for seed protein and oil content, and for its capacity to fix atmospheric nitrogen through…”
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Understanding abiotic stress tolerance mechanisms in soybean: A comparative evaluation of soybean response to drought and flooding stress by Mutava, Raymond N., Prince, Silvas Jebakumar K., Syed, Naeem Hasan, Song, Li, Valliyodan, Babu, Chen, Wei, Nguyen, Henry T.

“…Many sources of drought and flooding tolerance have been identified in soybean, however underlying molecular and physiological mechanisms are poorly…”
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Integrating omic approaches for abiotic stress tolerance in soybean by Deshmukh, Rupesh, Sonah, Humira, Patil, Gunvant, Chen, Wei, Prince, Silvas, Mutava, Raymond, Vuong, Tri, Valliyodan, Babu, Nguyen, Henry T

“…Soybean production is greatly influenced by abiotic stresses imposed by environmental factors such as drought, water submergence, salt, and heavy metals. A…”
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Global agricultural intensification during climate change: a role for genomics by Abberton, Michael, Batley, Jacqueline, Bentley, Alison, Bryant, John, Cai, Hongwei, Cockram, James, Costa de Oliveira, Antonio, Cseke, Leland J, Dempewolf, Hannes, De Pace, Ciro, Edwards, David, Gepts, Paul, Greenland, Andy, Hall, Anthony E, Henry, Robert, Hori, Kiyosumi, Howe, Glenn Thomas, Hughes, Stephen, Humphreys, Mike, Lightfoot, David, Marshall, Athole, Mayes, Sean, Nguyen, Henry T, Ogbonnaya, Francis C, Ortiz, Rodomiro, Paterson, Andrew H, Tuberosa, Roberto, Valliyodan, Babu, Varshney, Rajeev K, Yano, Masahiro

“…Agriculture is now facing the ‘perfect storm’ of climate change, increasing costs of fertilizer and rising food demands from a larger and wealthier human…”
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SoyDB: a knowledge database of soybean transcription factors by Wang, Zheng, Libault, Marc, Joshi, Trupti, Valliyodan, Babu, Nguyen, Henry T, Xu, Dong, Stacey, Gary, Cheng, Jianlin

“…Background: Transcription factors play the crucial rule of regulating gene expression and influence almost all biological processes. Systematically identifying…”
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Dissecting genomic hotspots underlying seed protein, oil, and sucrose content in an interspecific mapping population of soybean using high‐density linkage mapping by Patil, Gunvant, Vuong, Tri D., Kale, Sandip, Valliyodan, Babu, Deshmukh, Rupesh, Zhu, Chengsong, Wu, Xiaolei, Bai, Yonghe, Yungbluth, Dennis, Lu, Fang, Kumpatla, Siva, Shannon, J. Grover, Varshney, Rajeev K., Nguyen, Henry T.

“…Summary The cultivated [Glycine max (L) Merr.] and wild [Glycine soja Siebold & Zucc.] soybean species comprise wide variation in seed composition traits…”
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Neglecting legumes has compromised human health and sustainable food production by Foyer, Christine H., Lam, Hon-Ming, Nguyen, Henry T., Siddique, Kadambot H. M., Varshney, Rajeev K., Colmer, Timothy D., Cowling, Wallace, Bramley, Helen, Mori, Trevor A., Hodgson, Jonathan M., Cooper, James W., Miller, Anthony J., Kunert, Karl, Vorster, Juan, Cullis, Christopher, Ozga, Jocelyn A., Wahlqvist, Mark L., Liang, Yan, Shou, Huixia, Shi, Kai, Yu, Jingquan, Fodor, Nandor, Kaiser, Brent N., Wong, Fuk-Ling, Valliyodan, Babu, Considine, Michael J.

“…The United Nations declared 2016 as the International Year of Pulses (grain legumes) under the banner ‘nutritious seeds for a sustainable future’. A second…”
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