Search Results - "Vainio, Eeva J"

Viruses of fungi and oomycetes in the soil environment by Sutela, Suvi, Poimala, Anna, Vainio, Eeva J

“…ABSTRACT Soils support a myriad of organisms hosting highly diverse viromes. In this minireview, we focus on viruses hosted by true fungi and oomycetes…”
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Mitoviruses in the conifer root rot pathogens Heterobasidion annosum and H. parviporum by Vainio, Eeva J.

“…•RNA-Seq datasets were used for de novo contig assembly and virus detection.•The genomes of two new mitovirus strains were described.•Occurrence of similar…”
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ICTV Virus Taxonomy Profile: Partitiviridae by Vainio, Eeva J, Chiba, Sotaro, Ghabrial, Said A, Maiss, Edgar, Roossinck, Marilyn, Sabanadzovic, Sead, Suzuki, Nobuhiro, Xie, Jiatao, Nibert, Max, Ictv Report Consortium

“…The Partitiviridae is a family of small, isometric, non-enveloped viruses with bisegmented double-stranded (ds) RNA genomes of 3-4.8 kbp. The two genome…”
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Virus population structure in the ectomycorrhizal fungi Lactarius rufus and L. tabidus at two forest sites in Southern Finland by Sutela, Suvi, Vainio, Eeva J.

“…•Complete genomes of two bisegmented dsRNA viruses hosted by ectomycorrhizal fungi.•Sixty Lactarius isolates investigated originating from two boreal forest…”
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Mixed infection by a partitivirus and a negative-sense RNA virus related to mymonaviruses in the polypore fungus Bondarzewia berkeleyi by Vainio, Eeva J., Sutela, Suvi

“…•High-throughput sequencing was used for virus detection in Bondarzewia berkeleyi.•The complete genome sequence of a new alphapartitivirus is…”
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Complete genome sequence of a novel toti-like virus from the plant-pathogenic oomycete Phytophthora cactorum by Poimala, Anna, Vainio, Eeva J.

“…This report describes the complete genome sequence of a double-stranded RNA (dsRNA) virus infecting the oomycetous plant pathogen Phytophthora cactorum . The…”
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Viral diversity in Phytophthora cactorum population infecting strawberry by Poimala, Anna, Parikka, Päivi, Hantula, Jarkko, Vainio, Eeva J.

“…Summary Eighty‐eight Phytophthora cactorum strains isolated from crown or leather rot of strawberry in 1971–2019 were screened for viruses using RNA‐seq and…”
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Discovery and Community Dynamics of Novel ssRNA Mycoviruses in the Conifer Pathogen Heterobasidion parviporum by Sutela, Suvi, Piri, Tuula, Vainio, Eeva J

“…species are highly destructive basidiomycetous conifer pathogens of the Boreal forest region. Earlier studies have revealed dsRNA virus infections of families…”
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Taxonomic reorganization of family Partitiviridae and other recent progress in partitivirus research by Nibert, Max L., Ghabrial, Said A., Maiss, Edgar, Lesker, Till, Vainio, Eeva J., Jiang, Daohong, Suzuki, Nobuhiro

“…•Family Partitiviridae has undergone a taxonomic reorganization.•Four new genera of fungal or plant partitiviruses have been added to the family.•The three…”
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Taxonomy, biogeography and importance of Heterobasidion viruses by Vainio, Eeva J., Hantula, Jarkko

“…•Heterobasidion species host partitiviruses, mitoviruses and strains of HetRV6.•Heterobasidion viruses are able to cross species borders and form…”
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Editorial: Beyond humans-Virus therapy for pathogens of animals and plants by Vainio, Eeva J, Anany, Hany, Hyman, Paul

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Occurrence of similar mycoviruses in pathogenic, saprotrophic and mycorrhizal fungi inhabiting the same forest stand by Vainio, Eeva J., Pennanen, Taina, Rajala, Tiina, Hantula, Jarkko

“…Abstract Fungal viruses (mycoviruses) are considered to be highly host specific, but phylogenetic analysis supports the occasional occurrence of horizontal…”
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Heterobasidion Partitivirus 13 Mediates Severe Growth Debilitation and Major Alterations in the Gene Expression of a Fungal Forest Pathogen by Vainio, Eeva J, Jurvansuu, Jaana, Hyder, Rafiqul, Kashif, Muhammad, Piri, Tuula, Tuomivirta, Tero, Poimala, Anna, Xu, Ping, Mäkelä, Salla, Nitisa, Dina, Hantula, Jarkko

“…The fungal genus includes some of the most devastating conifer pathogens in the boreal forest region. In this study, we showed that the alphapartitivirus…”
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High Diversity of Novel Viruses in the Tree Pathogen Phytophthora castaneae Revealed by High-Throughput Sequencing of Total and Small RNA by Raco, Milica, Vainio, Eeva J, Sutela, Suvi, Eichmeier, Aleš, Hakalová, Eliška, Jung, Thomas, Botella, Leticia

“…, an oomycete pathogen causing root and trunk rot of different tree species in Asia, was shown to harbor a rich diversity of novel viruses from different…”
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A Framework for the Evaluation of Biosecurity, Commercial, Regulatory, and Scientific Impacts of Plant Viruses and Viroids Identified by NGS Technologies by Massart, Sebastien, Candresse, Thierry, Gil, José, Lacomme, Christophe, Predajna, Lukas, Ravnikar, Maja, Reynard, Jean-Sébastien, Rumbou, Artemis, Saldarelli, Pasquale, Škorić, Dijana, Vainio, Eeva J, Valkonen, Jari P T, Vanderschuren, Hervé, Varveri, Christina, Wetzel, Thierry

“…Recent advances in high-throughput sequencing technologies and bioinformatics have generated huge new opportunities for discovering and diagnosing plant…”
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Armillaria root rot fungi host single-stranded RNA viruses by Linnakoski, Riikka, Sutela, Suvi, Coetzee, Martin P. A., Duong, Tuan A., Pavlov, Igor N., Litovka, Yulia A., Hantula, Jarkko, Wingfield, Brenda D., Vainio, Eeva J.

“…Species of Armillaria are distributed globally and include some of the most important pathogens of forest and ornamental trees. Some of them form large…”
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Bunyaviruses Affect Growth, Sporulation, and Elicitin Production in Phytophthora cactorum by Poimala, Anna, Raco, Milica, Haikonen, Tuuli, Černý, Martin, Parikka, Päivi, Hantula, Jarkko, Vainio, Eeva J

“…is an important oomycetous plant pathogen with numerous host plant species, including garden strawberry ( × ) and silver birch ( ). also hosts mycoviruses, but…”
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Alphapartitiviruses of Heterobasidion Wood Decay Fungi Affect Each Other's Transmission and Host Growth by Kashif, Muhammad, Jurvansuu, Jaana, Vainio, Eeva J, Hantula, Jarkko

“…spp. root rot fungi are highly destructive forest pathogens of the northern boreal forests, and are known to host a diverse community of partitiviruses. The…”
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Towards the Forest Virome: High-Throughput Sequencing Drastically Expands Our Understanding on Virosphere in Temperate Forest Ecosystems by Rumbou, Artemis, Vainio, Eeva J., Büttner, Carmen

“…Thanks to the development of HTS technologies, a vast amount of genetic information on the virosphere of temperate forests has been gained in the last seven…”
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Phenotypic Recovery of a Heterobasidion Isolate Infected by a Debilitation-Associated Virus Is Related to Altered Host Gene Expression and Reduced Virus Titer by Kashif, Muhammad, Jurvansuu, Jaana, Hyder, Rafiqul, Vainio, Eeva J, Hantula, Jarkko

“…The fungal genus includes forest pathogenic species hosting a diverse group of partitiviruses. They include the host debilitating Heterobasidion partitivirus…”
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