Search Results - "Vainikka, A."

Lipid Fingerprints and Cofactor Dynamics of Light-Harvesting Complex II in Different Membranes by Thallmair, Sebastian, Vainikka, Petteri A., Marrink, Siewert J.

“…Plant light-harvesting complex II (LHCII) is the key antenna complex for plant photosynthesis. We present coarse-grained molecular dynamics simulations of…”
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Differing virulence of Aphanomyces astaci isolates and elevated resistance of noble crayfish Astacus astacus against crayfish plague by Makkonen, J, Jussila, J, Kortet, R, Vainikka, A, Kokko, H

“…Crayfish plague epidemics (caused by Aphanomyces astaci) have been causing population collapses among native European crayfish stocks since the late 1800s…”
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Latent crayfish plague ( Aphanomyces astaci) infection in a robust wild noble crayfish ( Astacus astacus) population by Jussila, J., Makkonen, J., Vainikka, A., Kortet, R., Kokko, H.

“…Apparently healthy wild noble crayfish ( Astacus astacus) sampled from Lake Mikitänjärvi, Kainuu, Finland in 2009 and 2010 were discovered to be PCR-positive…”
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Individually assessed boldness predicts Perca fluviatilis behaviour in shoals, but is not associated with the capture order or angling method by Kekäläinen, J., Podgorniak, T., Puolakka, T., Hyvärinen, P., Vainikka, A.

“…Selectivity of recreational angling on fish behaviour was studied by examining whether capture order or lure type (natural v. artificial bait) in ice‐fishing…”
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Trait‐related variation in the reproductive characteristics of female pikeperch (Sander lucioperca) by Olin, M., Vainikka, A., Roikonen, T., Ruuhijärvi, J., Huuskonen, H., Kotakorpi, M., Vesala, S., Ala‐Opas, P., Tiainen, J., Nurminen, L., Lehtonen, H.

“…Maternal characteristics typically affect the recruitment of an exploited fish population. The size and age at maturity, as well as the effects of maternal…”
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Divergent trends in life-history traits between Atlantic salmon Salmo salar of wild and hatchery origin in the Baltic Sea by Vainikka, A., Kallio-Nyberg, I., Heino, M., Koljonen, M.-L.

“…Four Atlantic salmon Salmo salar stocks in the Baltic Sea, varying in their breeding history, were studied for changes in life‐history traits over the years…”
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It takes time to see the menu from the body: an experiment on stable isotope composition in freshwater crayfishes by Jussila, J., Ruokonen, T. J., Syväranta, J., Kokko, H., Vainikka, A., Makkonen, J., Kortet, R.

“…For many applications and ecological studies in which wild individuals are brought to laboratory it would be essential to know accurately how fast novel diet…”
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Facilitating CG Simulations with MAD: The MArtini Database Server by Hilpert, Cécile, Beranger, Louis, Souza, Paulo C. T., Vainikka, Petteri A., Nieto, Vincent, Marrink, Siewert J., Monticelli, Luca, Launay, Guillaume

“…The MArtini Database (MAD - https://mad.ibcp.fr) is a web server designed for the sharing of structures and topologies of molecules parametrized with the…”
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Martini 3 Coarse-Grained Force Field for Carbohydrates by Grünewald, Fabian, Punt, Mats H., Jefferys, Elizabeth E., Vainikka, Petteri A., König, Melanie, Virtanen, Valtteri, Meyer, Travis A., Pezeshkian, Weria, Gormley, Adam J., Karonen, Maarit, Sansom, Mark S. P., Souza, Paulo C. T., Marrink, Siewert J.

“…The Martini 3 force field is a full reparametrization of the Martini coarse-grained model for biomolecular simulations. Due to the improved interaction…”
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Unidirectional rotating molecular motors dynamically interact with adsorbed proteins to direct the fate of mesenchymal stem cells by Zhou, Qihui, Chen, Jiawen, Luan, Yafei, Vainikka, Petteri A, Thallmair, Sebastian, Marrink, Siewert J, Feringa, Ben L, van Rijn, Patrick

“…Artificial rotary molecular motors convert energy into controlled motion and drive a system out of equilibrium with molecular precision. The molecular motion…”
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Predation risk allocation or direct vigilance response in the predator interaction between perch (Perca fluviatilis L.) and pike (Esox lucius L.)? by Vainikka, A., Jokelainen, T., Kortet, R., Ylönen, H.

“…–  Predation risk allocation hypothesis predicts that a prey's response to predator depends on prey's previous experience on predator. Here we tested whether…”
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Gender- and season-dependent relationships between testosterone, oestradiol and immune functions in wild roach by Vainikka, A., Jokinen, E. I., Kortet, R., Taskinen, J.

“…Plasma testosterone and 17β‐oestradiol concentrations, differential leukocyte counts and proportion of dead Rhipidocotyle campanula gill parasites (parasite…”
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Factors affecting between-lake variation in the occurrence of epidermal papillomatosis in roach, Rutilus rutilus (L.) by Korkea-aho, T.L, Vainikka, A, Kortet, R, Taskinen, J

“…The theory of island biogeography predicts that the probability of a species occupying an island depends on a dynamic equilibrium between extinction and…”
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Effects of testosterone and β-glucan on immune functions in tench by Vainikka, A., Jokinen, E. I., Kortet, R., Paukku, S., Pirhonen, J., Rantala, M. J., Taskinen, J.

“…A hormone manipulation was performed to examine the effects of testosterone on basal and β‐glucan‐induced immune functions in wild‐caught male and female tench…”
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Factors affecting the intensity of epidermal papillomatosis in populations of roach, Rutilus rutilus (L.), estimated as scale coverage by Korkea-aho, T, Vainikka, A, Taskinen, J

“…Studies of epidermal papillomatosis in fish populations have only rarely focused on the intensity of the disease, i.e. the number and size of papillomas…”
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Association between environmental stress and epidermal papillomatosis of roach Rutilus rutilus by KORKEA-AHO, T. L, PARTANEN, J. M, KIVINIEMI, V, VAINIKKA, A, TASKINEN, J

“…We studied the association between environmental stress and epidermal papillomatosis of roach Rutilus rutilus L. in Finnish waters using a 'matched pairs'…”
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Fishes in a changing world: learning from the past to promote sustainability of fish populations by Gordon, T. A. C., Harding, H. R., Clever, F. K., Davidson, I. K., Davison, W., Montgomery, D. W., Weatherhead, R. C., Windsor, F. M., Armstrong, J. D., Bardonnet, A., Bergman, E., Britton, J. R., Côté, I. M., D'agostino, D., Greenberg, L. A., Harborne, A. R., Kahilainen, K. K., Metcalfe, N. B., Mills, S. C., Milner, N. J., Mittermayer, F. H., Montorio, L., Nedelec, S. L., Prokkola, J. M., Rutterford, L. A., Salvanes, A. G. V., Simpson, S. D., Vainikka, A., Pinnegar, J. K., Santos, E. M.

“…Populations of fishes provide valuable services for billions of people, but face diverse and interacting threats that jeopardize their sustainability. Human…”
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The role of juvenile hormone in immune function and pheromone production trade-offs: a test of the immunocompetence handicap principle by Rantala, Markus J., Vainikka, Anssi, Kortet, Raine

“…Tenebrio molitor…”
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Spatial variation in growth, maturation schedules and reproductive investment of female sole Solea solea in the Northeast Atlantic by Mollet, Fabian M., Engelhard, Georg H., Vainikka, Anssi, Laugen, Ane T., Rijnsdorp, Adriaan D., Ernande, Bruno

“…Latitudinal variation in life-history traits is often explained by phenotypically plastic responses or local adaptations to different thermal regimes. We…”
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Do pheromones reveal male immunocompetence? by Rantala, Markus J., Jokinen, Ilmari, Kortet, Raine, Vainikka, Anssi, Suhonen, Jukka

“…Tenebrio molitor…”
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