Search Results - "Vaidya, Anup"

Identification of ARKL1 as a Negative Regulator of Epstein-Barr Virus Reactivation by Siddiqi, Umama Z, Vaidya, Anup S, Li, Xinliu, Marcon, Edyta, Tsao, Sai Wah, Greenblatt, Jack, Frappier, Lori

“…Epstein-Barr virus (EBV) maintains a life-long infection due to the ability to alternate between latent and lytic modes of replication. Lytic reactivation…”
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Caspase-11 Mediates Neutrophil Chemotaxis and Extracellular Trap Formation During Acute Gouty Arthritis Through Alteration of Cofilin Phosphorylation by Caution, Kyle, Young, Nicholas, Robledo-Avila, Frank, Krause, Kathrin, Abu Khweek, Arwa, Hamilton, Kaitlin, Badr, Asmaa, Vaidya, Anup, Daily, Kylene, Gosu, Hawin, Anne, Midhun N K, Eltobgy, Mostafa, Dakhlallah, Duaa, Argwal, Sudha, Estfanous, Shady, Zhang, Xiaoli, Partida-Sanchez, Santiago, Gavrilin, Mikhail A, Jarjour, Wael N, Amer, Amal O

“…Gout is characterized by attacks of arthritis with hyperuricemia and monosodium urate (MSU) crystal-induced inflammation within joints. Innate immune responses…”
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Nucleosome conformation dictates the histone code by Marunde, Matthew R, Fuchs, Harrison A, Burg, Jonathan M, Popova, Irina K, Vaidya, Anup, Hall, Nathan W, Weinzapfel, Ellen N, Meiners, Matthew J, Watson, Rachel, Gillespie, Zachary B, Taylor, Hailey F, Mukhsinova, Laylo, Onuoha, Ugochi C, Howard, Sarah A, Novitzky, Katherine, McAnarney, Eileen T, Krajewski, Krzysztof, Cowles, Martis W, Cheek, Marcus A, Sun, Zu-Wen, Venters, Bryan J, Keogh, Michael-C, Musselman, Catherine A

“…Histone post-translational modifications (PTMs) play a critical role in chromatin regulation. It has been proposed that these PTMs form localized 'codes' that…”
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Characterization of the plant homeodomain (PHD) reader family for their histone tail interactions by Jain, Kanishk, Fraser, Caroline S, Marunde, Matthew R, Parker, Madison M, Sagum, Cari, Burg, Jonathan M, Hall, Nathan, Popova, Irina K, Rodriguez, Keli L, Vaidya, Anup, Krajewski, Krzysztof, Keogh, Michael-Christopher, Bedford, Mark T, Strahl, Brian D

“…Plant homeodomain (PHD) fingers are central "readers" of histone post-translational modifications (PTMs) with > 100 PHD finger-containing proteins encoded by…”
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An acetylation-mediated chromatin switch governs H3K4 methylation read-write capability by Jain, Kanishk, Marunde, Matthew R, Burg, Jonathan M, Gloor, Susan L, Joseph, Faith M, Poncha, Karl F, Gillespie, Zachary B, Rodriguez, Keli L, Popova, Irina K, Hall, Nathan W, Vaidya, Anup, Howard, Sarah A, Taylor, Hailey F, Mukhsinova, Laylo, Onuoha, Ugochi C, Patteson, Emily F, Cooke, Spencer W, Taylor, Bethany C, Weinzapfel, Ellen N, Cheek, Marcus A, Meiners, Matthew J, Fox, Geoffrey C, Namitz, Kevin E W, Cowles, Martis W, Krajewski, Krzysztof, Sun, Zu-Wen, Cosgrove, Michael S, Young, Nicolas L, Keogh, Michael-Christopher, Strahl, Brian D

“…In nucleosomes, histone N-terminal tails exist in dynamic equilibrium between free/accessible and collapsed/DNA-bound states. The latter state is expected to…”
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Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch by Hicks, Chad W, Rahman, Sanim, Gloor, Susan L, Fields, James K, Husby, Natalia Ledo, Vaidya, Anup, Maier, Keith E, Morgan, Michael, Keogh, Michael-Christopher, Wolberger, Cynthia

“…Abstract Monoubiquitination of histones H2B-K120 (H2BK120ub) and H2A-K119 (H2AK119ub) play opposing roles in regulating transcription and chromatin compaction…”
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A trivalent nucleosome interaction by PHIP/BRWD2 is disrupted in neurodevelopmental disorders and cancer by Morgan, Marc A J, Popova, Irina K, Vaidya, Anup, Burg, Jonathan M, Marunde, Matthew R, Rendleman, Emily J, Dumar, Zachary J, Watson, Rachel, Meiners, Matthew J, Howard, Sarah A, Khalatyan, Natalia, Vaughan, Robert M, Rothbart, Scott B, Keogh, Michael-C, Shilatifard, Ali

“…Mutations in the chromatin regulator cause the human neurodevelopmental disorder Chung-Jansen syndrome, while alterations in expression are linked to cancer…”
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Methylomic correlates of autophagy activity in cystic fibrosis by Caution, Kyle, Pan, Alexander, Krause, Kathrin, Badr, Asmaa, Hamilton, Kaitlin, Vaidya, Anup, Gosu, Hawin, Daily, Kylene, Estfanous, Shady, Gavrilin, Mikhail A., Drew, Mark E., Cormet-Boyaka, Estelle, Chen, Xi, Frankhouser, David E., Bundschuh, Ralf, Yan, Pearlly, Dakhlallah, Duaa, Amer, Amal O.

“…Autophagy is a highly regulated, biological process that provides energy during periods of stress and starvation. This conserved process also acts as a defense…”
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3090 – KDM4A/C SUSTAIN AN ONCOGENIC PROGRAM BY EPIGENETIC REWIRING OF ONCOGENIC AND LINEAGE ENHANCERS by Jha, Deepak, Daley, George, Dominguez, Daniel, Keogh, Michael-Christopher, Li, Hu, Schlaeger, Thorsten, Shi, Yang, Shipp, Margaret, Bhan, Arunoday, Chapuy, Bjoern, Cote, Claire, da Rocha, Edroaldo, Gillespie, Zachary, Howard, Sarah, Huang, Yu-Chung, Jing, Ran, Marunde, Matthew, Missios, Pavlos, Morris, Vivian, Morse, Michael, North, Trista, Rowe, Robert, Tang, Yang, Najia, Mohamad Toufic, Vaidya, Anup, Kubaczka, Caroline, Laurent, Benoit, Zhang, Cheng

“…Many prior studies have focused on the role of mutations in epigenetic factors in cancer (e.g., EZH2, CREBBP, EP300, KMT2C, KMT2D) but drugs targeting these…”
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Abstract 7027: Direct multi-omics for the masses: Linking DNA methylation to chromatin targets via TEM-seq by Maier, Keith E., Sunitha Kumary, Vishnu U., Venters, Bryan J., Hickman, Allison, Vaidya, Anup, Anderson, James, Ezell, Ryan, Burg, Jonathan M., Williams, Louise, Ponnaluri, Chaithanya, Esteve, Pierre, Meek, Isaac, Sun, Zu-wen, Cowles, Martis W., Pradhan, Sriharsa, Keogh, Michael-Christopher

“…Abstract DNA methylation (DNAme) is an epigenetic mark that includes the modification of cytosine resides (5mC) within CpG islands. In addition to well…”
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Abstract 7026: Multi-omic genomic mapping with long read sequencing by Venters, Bryan J., Hook, Paul W., Kumary, Vishnu S., Hickman, Alli R., Anderson, James T., Vaidya, Anup, Ezell, Ryan J., Burg, Jonathan M., Sun, Zu-Wen, Cowles, Martis W., Timp, Winston, Keogh, Michael-Christopher

“…Abstract Gene transcription is regulated by the complex interplay between histone post-translational modifications (PTMs), chromatin associated proteins…”
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Structural basis of histone H2A lysine 119 deubiquitination by Polycomb repressive deubiquitinase BAP1/ASXL1 by Thomas, Jonathan F, Valencia-Sánchez, Marco Igor, Tamburri, Simone, Gloor, Susan L, Rustichelli, Samantha, Godínez-López, Victoria, De Ioannes, Pablo, Lee, Rachel, Abini-Agbomson, Stephen, Gretarsson, Kristjan, Burg, Jonathan M, Hickman, Allison R, Sun, Lu, Gopinath, Saarang, Taylor, Hailey F, Sun, Zu-Wen, Ezell, Ryan J, Vaidya, Anup, Meiners, Matthew J, Cheek, Marcus A, Rice, William J, Svetlov, Vladimir, Nudler, Evgeny, Lu, Chao, Keogh, Michael-Christopher, Pasini, Diego, Armache, Karim-Jean

“…Histone H2A lysine 119 (H2AK119Ub) is monoubiquitinated by Polycomb repressive complex 1 and deubiquitinated by Polycomb repressive deubiquitinase complex…”
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Elucidating the role of ARKL1 in regulating Epstein-Barr virus (EBV) iinfection by Vaidya, Anup S

“…ARKL1 and Arkadia were previously identified as proteins that bind to the CK2β KSSR motif. Since the Epstein-Barr virus (EBV) protein Epstein-Barr nuclear…”
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Proceedings of the 7th Biannual International Symposium on Nasopharyngeal Carcinoma 2015: Yogyakarta, Indonesia. 4-6 June 2015 by Tan, IB, Chang, Ellen T., Chen, Chien-Jen, Hsu, Wan-Lun, Chien, Yin-Chu, Hildesheim, Allan, McKay, James D., Gaborieau, Valerie, Kaderi, Mohamed Arifin Bin, Purnomosari, Dewajani, Voegele, Catherine, LeCalvez-Kelm, Florence, Byrnes, Graham, Brennan, Paul, Devi, Beena, Li, L., Zhang, Y., Fan, Y., Sun, K., Du, Z., Sun, H., Chan, A. T., Tsao, S. W., Zeng, Y. X., Tao, Q., Busson, Pierre, Lhuillier, Claire, Morales, Olivier, Mrizak, Dhafer, Gelin, Aurore, Kapetanakis, Nikiforos, Delhem, Nadira, Mansouri, Sheila, Cao, Jennifer, Vaidya, Anup, Frappier, Lori, Wai, Lo Kwok, Chen, Sui-Hong, Du, Jin-lin, Ji, Ming-Fang, Huang, Qi-Hong, Liu, Qing, Cao, Su-Mei, Doolan, Denise L., Coghill, Anna, Mulvenna, Jason, Proietti, Carla, Lekieffre, Lea, Bethony, Jeffrey, Hildesheim, and Allan, Fles, Renske, Indrasari, Sagung Rai, Herdini, Camelia, Martini, Santi, Isfandiari, Atoillah, Rhomdoni, Achmad, Adham, Marlinda, Mayangsari, Ika, van Werkhoven, Erik, Wildeman, Maarten, Hariwiyanto, Bambang, Hermani, Bambang, Kentjono, Widodo Ario, Haryana, Sofia Mubarika, Schmidt, Marjanka, O’Sullivan, Brian, Ozyar, Enis, Lee, Anne W. M., Zeng, Mu-Sheng, Gao, Xiaojiang, Tang, Minzhong, Martin, Pat, Zeng, Yi, Carrington, Mary, Coghill, Anna E., Bu, Wei, Nguyen, Hanh, Yu, Kelly J., Lou, Pei-Jen, Wang, Cheng-Ping, Cohen, Jeffrey I., King, Ann D., Chen, Tseng-Cheng, Lin, Ching-Yuan, Tsou, Yung-An, Leu, Yi-Shing, Laio, Li-Jen, Chang, Yen-Liang, Hua, Chun-Hun, Wu, Ming-Shiang, Hsiao, Chu-Hsing Kate, Lee, Jehn-Chuan, Tsai, Ming-Hsui, Cheng, Skye Hung-Chun, Liao, Li-Jen, Yang, Tsung-Lin, Ko, Jenq-Yuh, Ko, Josephine Mun Yee, Dai, Wei, Kwong, Dora

“…A1 Hope and despair in the current treatment of nasopharyngeal cancer IB Tan I1 NPC international incidence and risk factors Ellen T Chang I2 Familial…”
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