Search Results - "Twycross, Jamie"

A new accuracy measure based on bounded relative error for time series forecasting by Chen, Chao, Twycross, Jamie, Garibaldi, Jonathan M

“…Many accuracy measures have been proposed in the past for time series forecasting comparisons. However, many of these measures suffer from one or more issues…”
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A genome-scale metabolic model of Cupriavidus necator H16 integrated with TraDIS and transcriptomic data reveals metabolic insights for biotechnological applications by Pearcy, Nicole, Garavaglia, Marco, Millat, Thomas, Gilbert, James P, Song, Yoseb, Hartman, Hassan, Woods, Craig, Tomi-Andrino, Claudio, Reddy Bommareddy, Rajesh, Cho, Byung-Kwan, Fell, David A, Poolman, Mark, King, John R, Winzer, Klaus, Twycross, Jamie, Minton, Nigel P

“…Exploiting biological processes to recycle renewable carbon into high value platform chemicals provides a sustainable and greener alternative to current…”
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Identification of Gene Modules Associated with Low Temperatures Response in Bambara Groundnut by Network-Based Analysis by Bonthala, Venkata Suresh, Mayes, Katie, Moreton, Joanna, Blythe, Martin, Wright, Victoria, May, Sean Tobias, Massawe, Festo, Mayes, Sean, Twycross, Jamie

“…Bambara groundnut (Vigna subterranea (L.) Verdc.) is an African legume and is a promising underutilized crop with good seed nutritional values. Low temperature…”
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A thermodynamic switch modulates abscisic acid receptor sensitivity by Dupeux, Florine, Santiago, Julia, Betz, Katja, Twycross, Jamie, Park, Sang-Youl, Rodriguez, Lesia, Gonzalez-Guzman, Miguel, Jensen, Malene Ringkjøbing, Krasnogor, Natalio, Blackledge, Martin, Holdsworth, Michael, Cutler, Sean R, Rodriguez, Pedro L, Márquez, José Antonio

“…Abscisic acid (ABA) is a key hormone regulating plant growth, development and the response to biotic and abiotic stress. ABA binding to pyrabactin resistance…”
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Measuring and modelling the response of Klebsiella pneumoniae KPC prey to Bdellovibrio bacteriovorus predation, in human serum and defined buffer by Baker, Michelle, Negus, David, Raghunathan, Dhaarini, Radford, Paul, Moore, Chris, Clark, Gemma, Diggle, Mathew, Tyson, Jess, Twycross, Jamie, Sockett, R. Elizabeth

“…In worldwide conditions of increasingly antibiotic-resistant hospital infections, it is important to research alternative therapies. Bdellovibrio bacteriovorus…”
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Immune system approaches to intrusion detection – a review by Kim, Jungwon, Bentley, Peter J, Aickelin, Uwe, Greensmith, Julie, Tedesco, Gianni, Twycross, Jamie

“…The use of artificial immune systems in intrusion detection is an appealing concept for two reasons. First, the human immune system provides the human body…”
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The Lanthipeptide Synthetase-like Protein CA_C0082 Is an Effector of Agr Quorum Sensing in Clostridium acetobutylicum by Humphreys, Jonathan R, Bean, Zak, Twycross, Jamie, Winzer, Klaus

“…Lanthipeptide synthetases are present in all domains of life. They catalyze a crucial step during lanthipeptide biosynthesis by introducing thioether linkages…”
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A Direct Approach for Determining the Switch Points in the Karnik-Mendel Algorithm by Chen, Chao, John, Robert, Twycross, Jamie, Garibaldi, Jonathan M.

“…The Karnik-Mendel algorithm is used to compute the centroid of interval type-2 fuzzy sets, determining the switch points needed for the lower and upper bounds…”
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A Comprehensive Study of the Efficiency of Type-Reduction Algorithms by Chen, Chao, Wu, Dongrui, Garibaldi, Jonathan M., John, Robert I., Twycross, Jamie, Mendel, Jerry M.

“…Improving the efficiency of type-reduction algorithms continues to attract research interest. Recently, there has been some new type-reduction approaches…”
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A Comment on "A Direct Approach for Determining the Switch Points in the Karnik-Mendel Algorithm" by Chen, Chao, Wu, Dongrui, Garibaldi, Jonathan Mark, John, Robert, Twycross, Jamie, Mendel, Jerry M.

“…This letter is a supplement to the previous paper "A Direct Approach for Determining the Switch Points in the Karnik-Mendel Algorithm". In the previous paper,…”
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Software tools for green and sustainable chemistry by Derbenev, Ivan N., Dowden, James, Twycross, Jamie, Hirst, Jonathan D.

“…In this review, we consider green chemistry metrics, related software tools, and the opportunities and challenges for their use in research laboratories. We…”
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Information fusion in the immune system by Twycross, Jamie, Aickelin, Uwe

“…Biologically-inspired methods such as evolutionary algorithms and neural networks are proving useful in the field of information fusion. Artificial immune…”
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The Lanthipeptide Synthetase-like Protein CA_C0082 Is an Effector of Agr Quorum Sensing in IClostridium acetobutylicum/I by Humphreys, Jonathan R, Bean, Zak, Twycross, Jamie, Winzer, Klaus

“…Lanthipeptide synthetases are present in all domains of life. They catalyze a crucial step during lanthipeptide biosynthesis by introducing thioether linkages…”
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Gsmodutils: a python based framework for test-driven genome scale metabolic model development by Gilbert, James, Pearcy, Nicole, Norman, Rupert, Millat, Thomas, Winzer, Klaus, King, John, Hodgman, Charlie, Minton, Nigel, Twycross, Jamie

“…Abstract Motivation Genome scale metabolic models (GSMMs) are increasingly important for systems biology and metabolic engineering research as they are capable…”
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Dual Predation by Bacteriophage and Bdellovibrio bacteriovorus Can Eradicate Escherichia coli Prey in Situations where Single Predation Cannot by Hobley, Laura, Summers, J Kimberley, Till, Rob, Milner, David S, Atterbury, Robert J, Stroud, Amy, Capeness, Michael J, Gray, Stephanie, Leidenroth, Andreas, Lambert, Carey, Connerton, Ian, Twycross, Jamie, Baker, Michelle, Tyson, Jess, Kreft, Jan-Ulrich, Sockett, R Elizabeth

“…Bacteria are preyed upon by diverse microbial predators, including bacteriophage and predatory bacteria, such as While bacteriophage are used as antimicrobial…”
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A Comment on “A Direct Approach for Determining the Switch Points in the Karnik–Mendel Algorith” by Chen, Chao, Wu, Dongrui, Garibaldi, Jonathan Mark, John, Robert, Twycross, Jamie, Mendel, Jerry M

“…This letter is a supplement to the previous paper “A Direct Approach for Determining the Switch Points in the Karnik–Mendel Algorith”. In the previous paper,…”
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Erratum To: A thermodynamic switch modulates abscisic acid receptor sensitivity by Dupeux, Florine, Santiago, Julia, Betz, Katja, Twycross, Jamie, Park, Sang‐Youl, Rodriguez, Lesia, Gonzalez‐Guzman, Miguel, Jensen, Malene Rinkjøbing, Krasnogor, Natalio, Blackledge, Martin, Holdsworth, Michael, Cutler, Sean R, Rodriguez, Pedro L, Márquez, José Antonio

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Toward Full-Stack In Silico Synthetic Biology: Integrating Model Specification, Simulation, Verification, and Biological Compilation by Konur, Savas, Mierla, Laurentiu, Fellermann, Harold, Ladroue, Christophe, Brown, Bradley, Wipat, Anil, Twycross, Jamie, Dun, Boyang Peter, Kalvala, Sara, Gheorghe, Marian, Krasnogor, Natalio

“…We present the Infobiotics Workbench (IBW), a user-friendly, scalable, and integrated computational environment for the computer-aided design of synthetic…”
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A thermodynamic switch modulates abscisic acid receptor sensitivity by Dupeux, Florine, Santiago, Julia, Betz, Katja, Twycross, Jamie, Park, Sang‐Youl, Rodriguez, Lesia, Gonzalez‐Guzman, Miguel, Jensen, Malene Rinkjøbing, Krasnogor, Natalio, Blackledge, Martin, Holdsworth, Michael, Cutler, Sean R, Rodriguez, Pedro L, Márquez, José Antonio

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Modelling emerging pollutants in wastewater treatment: A Case study using the pharmaceutical 17α−ethinylestradiol by Acheampong, Edward, Dryden, Ian L., Wattis, Jonathan A.D., Twycross, Jamie, Scrimshaw, Mark D., Gomes, Rachel L.

“…•Deterministic and stochastic ODE models were developed to investigate EE2 dynamics.•Purely deterministic models do not adequately fit the data.•Mixed…”
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