Search Results - "Turner, Dann"

A Roadmap for Genome-Based Phage Taxonomy by Turner, Dann, Kropinski, Andrew M, Adriaenssens, Evelien M

“…Bacteriophage (phage) taxonomy has been in flux since its inception over four decades ago. Genome sequencing has put pressure on the classification system and…”
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Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks by Bin Jang, Ho, Bolduc, Benjamin, Zablocki, Olivier, Kuhn, Jens H., Roux, Simon, Adriaenssens, Evelien M., Brister, J. Rodney, Kropinski, Andrew M, Krupovic, Mart, Lavigne, Rob, Turner, Dann, Sullivan, Matthew B.

“…Microbiomes from every environment contain a myriad of uncultivated archaeal and bacterial viruses, but studying these viruses is hampered by the lack of a…”
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661W Photoreceptor Cell Line as a Cell Model for Studying Retinal Ciliopathies by Wheway, Gabrielle, Nazlamova, Liliya, Turner, Dann, Cross, Stephen

“…The retina contains several ciliated cell types, including the retinal pigment epithelium (RPE) and photoreceptor cells. The photoreceptor cilium is one of the…”
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Genomic analysis of two novel bacteriophages infecting Acinetobacter beijerinckii and halotolerans species by Gomes, Marta Teresa Silva, Domingues, Rita Alexandra Carpinteiro, Turner, Dann, Oliveira, Hugo Alexandre Mendes

“…Bacteriophages are the most diverse genetic entities on Earth. In this study, two novel bacteriophages, nACB1 (Podoviridae morphotype) and nACB2 (Myoviridae…”
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In vitro and in vivo evaluation of the biofilm-degrading Pseudomonas phage Motto, as a candidate for phage therapy by Manohar, Prasanth, Loh, Belinda, Turner, Dann, Tamizhselvi, Ramasamy, Mathankumar, Marimuthu, Elangovan, Namasivayam, Nachimuthu, Ramesh, Leptihn, Sebastian

“…Infections caused by are becoming increasingly difficult to treat due to the emergence of strains that have acquired multidrug resistance. Therefore, phage…”
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Genomic Diversity of Bacteriophages Infecting the Genus Acinetobacter by Oliveira, Hugo, Domingues, Rita, Evans, Benjamin, Sutton, J Mark, Adriaenssens, Evelien M, Turner, Dann

“…The number of sequenced phage genomes in the International Nucleotide Sequence Database Collaboration has increased significantly in recent years, from 37 in…”
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Characterisation and genome sequence of the lytic Acinetobacter baumannii bacteriophage vB_AbaS_Loki by Turner, Dann, Wand, Matthew E, Briers, Yves, Lavigne, Rob, Sutton, J Mark, Reynolds, Darren M

“…Acinetobacter baumannii has emerged as an important nosocomial pathogen in healthcare and community settings. While over 100 of Acinetobacter phages have been…”
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From Orphan Phage to a Proposed New Family-the Diversity of N4-Like Viruses by Wittmann, Johannes, Turner, Dann, Millard, Andrew D, Mahadevan, Padmanabhan, Kropinski, Andrew M, Adriaenssens, Evelien M

“…Escherichia phage N4 was isolated in 1966 in Italy and has remained a genomic orphan for a long time. It encodes an extremely large virion-associated RNA…”
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Comparative Analysis of 37 Acinetobacter Bacteriophages by Turner, Dann, Ackermann, Hans-Wolfgang, Kropinski, Andrew M, Lavigne, Rob, Sutton, J Mark, Reynolds, Darren M

“…Members of the genus are ubiquitous in the environment and the multiple-drug resistant species is of significant clinical concern. This clinical relevance is…”
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Pectobacterium atrosepticum Phage vB_PatP_CB5: A Member of the Proposed Genus ' Phimunavirus ' by Buttimer, Colin, Lucid, Alan, Neve, Horst, Franz, Charles M A P, O'Mahony, Jim, Turner, Dann, Lavigne, Rob, Coffey, Aidan

“…is a phytopathogen of economic importance as it is the causative agent of potato blackleg and soft rot. Here we describe the phage vB_PatP_CB5 (abbreviated as…”
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The control of waterborne pathogenic bacteria in fresh water using a biologically active filter by Steven, Joshua A. C., Thorn, Robin M. S., Robinson, Gareth M., Turner, Dann, Lee, Jack E., Reynolds, Darren M.

“…The aim of this study was to investigate the control of three species of bacteria commonly associated with biologically contaminated water, using…”
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Phage Annotation Guide: Guidelines for Assembly and High-Quality Annotation by Turner, Dann, Adriaenssens, Evelien M., Tolstoy, Igor, Kropinski, Andrew M.

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The Sequence of Two Bacteriophages with Hypermodified Bases Reveals Novel Phage-Host Interactions by Kropinski, Andrew M, Turner, Dann, Nash, John H E, Ackermann, Hans-Wolfgang, Lingohr, Erika J, Warren, Richard A, Ehrlich, Kenneth C, Ehrlich, Melanie

“…Bacteriophages SP-15 and ΦW-14 are members of the infecting and (formerly ) , respectively. What links them is that in both cases, approximately 50% of the…”
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Genomic Analysis of Two Novel Bacteriophages Infecting IAcinetobacter beijerinckii/I and Ihalotolerans/I Species by Gomes, Marta, Domingues, Rita, Turner, Dann, Oliveira, Hugo

“…Bacteriophages are the most diverse genetic entities on Earth. In this study, two novel bacteriophages, nACB1 (Podoviridae morphotype) and nACB2 (Myoviridae…”
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Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee by Turner, Dann, Shkoporov, Andrey N., Lood, Cédric, Millard, Andrew D., Dutilh, Bas E., Alfenas-Zerbini, Poliane, van Zyl, Leonardo J., Aziz, Ramy K., Oksanen, Hanna M., Poranen, Minna M., Kropinski, Andrew M., Barylski, Jakub, Brister, J Rodney, Chanisvili, Nina, Edwards, Rob A., Enault, François, Gillis, Annika, Knezevic, Petar, Krupovic, Mart, Kurtböke, Ipek, Kushkina, Alla, Lavigne, Rob, Lehman, Susan, Lobocka, Malgorzata, Moraru, Cristina, Moreno Switt, Andrea, Morozova, Vera, Nakavuma, Jesca, Reyes Muñoz, Alejandro, Rūmnieks, Jānis, Sarkar, BL, Sullivan, Matthew B., Uchiyama, Jumpei, Wittmann, Johannes, Yigang, Tong, Adriaenssens, Evelien M.

“…This article summarises the activities of the Bacterial Viruses Subcommittee of the International Committee on Taxonomy of Viruses for the period of March…”
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ICTV Virus Taxonomy Profile: Chaseviridae 2022: This article is part of the ICTV Virus Taxonomy Profiles collection by Anany, Hany, Mahadevan, Padmanabhan, Turner, Dann, Adriaenssens, Evelien M., Kropinski, Andrew M.

“…Members of the family Chaseviridae are lytic bacterial viruses infecting representatives of the bacterial class Gammaproteobacteria. Chaseviruses have a global…”
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Resistance to bacteriophage incurs a cost to virulence in drug-resistant Acinetobacter baumannii by Manley, Robyn, Fitch, Christian, Francis, Vanessa, Temperton, Isaac, Turner, Dann, Fletcher, Julie, Phil, Mitchelmore, Michell, Steve, Temperton, Ben

“…is a critical priority pathogen for novel antimicrobials (World Health Organization) because of the rise in nosocomial infections and its ability to evolve…”
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Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee by Adriaenssens, Evelien M., Sullivan, Matthew B., Knezevic, Petar, van Zyl, Leonardo J., Sarkar, B. L., Dutilh, Bas E., Alfenas-Zerbini, Poliane, Łobocka, Małgorzata, Tong, Yigang, Brister, James Rodney, Moreno Switt, Andrea I., Klumpp, Jochen, Aziz, Ramy Karam, Barylski, Jakub, Uchiyama, Jumpei, Edwards, Rob A., Kropinski, Andrew M., Petty, Nicola K., Clokie, Martha R. J., Kushkina, Alla I., Morozova, Vera V., Duffy, Siobain, Gillis, Annika, Rumnieks, Janis, Kurtböke, İpek, Chanishvili, Nina, Goodridge, Lawrence, Wittmann, Johannes, Lavigne, Rob, Jang, Ho Bin, Prangishvili, David, Enault, Francois, Turner, Dann, Poranen, Minna M., Oksanen, Hanna M., Krupovic, Mart

“…This article is a summary of the activities of the ICTV’s Bacterial and Archaeal Viruses Subcommittee for the years 2018 and 2019. Highlights include the…”
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Phage Annotation Guide: Guidelines for Assembly and High-Quality Annotation by Turner, Dann, Adriaenssens, Evelien M, Tolstoy, Igor, Kropinski, Andrew M

“…All sequencing projects of bacteriophages (phages) should seek to report an accurate and comprehensive annotation of their genomes. This article defines 14…”
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CoreGenes3.5: a webserver for the determination of core genes from sets of viral and small bacterial genomes by Turner, Dann, Reynolds, Darren, Seto, Donald, Mahadevan, Padmanabhan

“…CoreGenes3.5 is a webserver that determines sets of core genes from viral and small bacterial genomes as an automated batch process. Previous versions of…”
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