Search Results - "Trachtenberg, E. A."

High-resolution, high-throughput HLA genotyping by next-generation sequencing by Bentley, G., Higuchi, R., Hoglund, B., Goodridge, D., Sayer, D., Trachtenberg, E. A., Erlich, H. A.

“…The human leukocyte antigen (HLA) class I and class II loci are the most polymorphic genes in the human genome. Hematopoietic stem cell transplantation…”
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HLA class II haplotype associations with inflammatory bowel disease in Jewish (Ashkenazi) and non-Jewish Caucasian populations by Trachtenberg, E.A, Yang, H, Hayes, E, Vinson, M, Lin, C, Targan, S.R, Tyan, D, Erlich, H, Rotter, J.I

“…Ulcerative colitis (UC) and Crohn’s disease (CD) are the clinical entities comprising idiopathic inflammatory bowel disease (IBD). Previous studies on the…”
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HLA class II linkage disequilibrium and haplotype evolution in the Cayapa Indians of Ecuador by TRACHTENBERG, E. A, ERLICH, H. A, RICKARDS, O, DESTEFANO, G. F, KLITZ, W

“…DNA-based typing of the HLA class II loci in a sample of the Cayapa Indians of Ecuador reveals several lines of evidence that selection has operated to…”
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A multi-site study using high-resolution HLA genotyping by next generation sequencing by Holcomb, C. L., Höglund, B., Anderson, M. W., Blake, L. A., Böhme, I., Egholm, M., Ferriola, D., Gabriel, C., Gelber, S. E., Goodridge, D., Hawbecker, S., Klein, R., Ladner, M., Lind, C., Monos, D., Pando, M. J., Pröll, J., Sayer, D. C., Schmitz-Agheguian, G., Simen, B. B., Thiele, B., Trachtenberg, E. A., Tyan, D. B., Wassmuth, R., White, S., Erlich, H. A.

“…The high degree of polymorphism at human leukocyte antigen (HLA) class I and class II loci makes high‐resolution HLA typing challenging. Current typing…”
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Genotype List String: a grammar for describing HLA and KIR genotyping results in a text string by Milius, R. P., Mack, S. J., Hollenbach, J. A., Pollack, J., Heuer, M. L., Gragert, L., Spellman, S., Guethlein, L. A., Trachtenberg, E. A., Cooley, S., Bochtler, W., Mueller, C. R., Robinson, J., Marsh, S. G. E., Maiers, M.

“…Knowledge of an individual's human leukocyte antigen (HLA) genotype is essential for modern medical genetics, and is crucial for hematopoietic stem cell and…”
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Detection for channels with transition noise by Chen, M., Trachtenberg, E.A.

“…Transition noise is known to be a major cause of errors for high density magnetic recording. This noise is signal dependent and can be modeled as…”
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Performance estimation for maximum-likelihood detection for channels with transition noise by Miaolin Chen, Trachtenberg, E.A.

“…Transition noise is known to be a major cause of errors for high density magnetic recording. This noise is signal dependent and can be modeled as…”
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Design automation tools for efficient implementation of logic functions by decomposition by Varma, D., Trachtenberg, E.A.

“…A description is given of linear and disjoint decompositions of completely specified Boolean functions using transform methods. Since previously known…”
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Blackout detection as a multiobjective optimization problem by CHAUDHARY, A. M, TRACHTENBERG, E. A

“…We study new fast computational procedures for a pilot blackout (total loss of vision) detection in real time. Their validity is demonstrated by data acquired…”
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Analysis of HLA class II haplotypes in the Cayapa Indians of Ecuador : a novel DRBI allele reveals evidence for convergent evolution and balancing selection at position 86 by TITUS-TRACHTENBERG, E. A, RICKARDS, O, DE STEFANO, G. F, ERLICH, H. A

“…PCR amplification, oligonucleotide probe typing, and sequencing were used to analyze the HLA class II loci (DRB1, DQA1, DAB1, and DPB1) of an isolated South…”
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Visual evoked potential processing under acceleration stress by MASKARINEC, G. J, TRACHTENBERG, E. A, BANU ONARAL

“…A study of the use of visual evoked potentials to detect acceleration induced blackout is presented. Decisions concerning the presence or absence of the visual…”
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Evolution of HLA Class II Molecules: Allelic and Amino Acid Site Variability Across Populations by Salamon, Hugh, Klitz, William, Easteal, Simon, Gao, Xiaojiang, Erlich, Henry A, Fernandez-Vina, Marcello, Trachtenberg, Elizabeth A, McWeeney, Shannon K, Nelson, Mark P, Thomson, Glenys

“…Analysis of the highly polymorphic beta1 domains of the HLA class II molecules encoded by the DRB1, DQB1, and DPB1 loci reveals contrasting levels of diversity…”
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Evolution of Pacific/Asian populations inferred from HLA class II allele frequency distributions by Mack, S.J., Bugawan, T.L., Moonsamy, P.V., Erlich, J.A., Trachtenberg, E.A., Paik, Y.K., Begovich, A.B., Saha, N., Beck, H.P., Stoneking, M., Erlich, H.A.

“…: The allele frequency distributions for the HLA class II loci, DRB1, DQB1 and DPB1, in eight Pacific/Asian populations: Hawaiian, Samoan, Malay, Papua New…”
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Binary input/ternary output switching circuits designed via the sign transformation by Besslich, P.W., Trachtenberg, E.A.

“…Using the recently developed sign transformation as a design tool, a method for designing binary input/ternary output circuits is presented. It is shown how to…”
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Multi-locus HLA class I and II allele and haplotype associations with follicular lymphoma by Skibola, C. F., Akers, N. K., Conde, L., Ladner, M., Hawbecker, S. K., Cohen, F., Ribas, F., Erlich, H. A., Goodridge, D., Trachtenberg, E. A., Smith, M. T., Bracci, P. M.

“…Follicular lymphoma (FL) is an indolent, sometimes, fatal disease characterized by recurrence at progressively shorter intervals and is frequently refractive…”
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Identification of a novel DQB1 allele (0609) segregating in an Ashkenazi Jewish family: implications for DQB1 typing systems by Titus-Trachtenberg, E A, Bugawan, T L, Erlich, H A

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Hardy-Weinberg testing for HLA class II (DRB1, DQA1, DQB1, AND DPB1) loci in 26 human ethnic groups by Chen, J.J., Hollenbach, J.A., Trachtenberg, E.A., Just, J.J., Carrington, M., Rønningen, K.S., Begovich, A., King, M.-C., McWeeney, S., Mack, S.J., Erlich, H.A., Thomson, G.

“…Testing the fit of population data to Hardy‐Weinberg proportions is crucial in the validation of many current approaches in population genetic studies. In this…”
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Analysis of HLA class II haplotypes in the Cayapa Indians of Ecuador: a novel DRB1 allele reveals evidence for convergent evolution and balancing selection at position 86 by Titus-Trachtenberg, E A, Rickards, O, De Stefano, G F, Erlich, H A

“…PCR amplification, oligonucleotide probe typing, and sequencing were used to analyze the HLA class II loci (DRB1, DQA1, DQB1, and DPB1) of an isolated South…”
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Construction of group transforms subject to several performance criteria by Trachtenberg, E.

“…A transform, L, is defined in this paper and studied subject to the two opposing performance criteria, computational effectiveness and accuracy of…”
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Non-conservative substitutions distinguish previously uncharacterized HLA-A molecules by Hickman, H.D., Cavett, J.W., Ellexson-Turner, M.E., Sparkman, J.N., Bennett, T.T., Turner, S., Sidebottom, D.A., Trachtenberg, E.A., Confer, D.L., Hildebrand, W.H.

“…: The extent of class I HLA polymorphism is not yet realized, and to provide a glimpse of the HLA‐A polymorphism which remains undetected, we have analyzed…”
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