Search Results - "Tompitak, Marco"
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Multiplexing Genetic and Nucleosome Positioning Codes: A Computational Approach
Published in PloS one (07-06-2016)“…Eukaryotic DNA is strongly bent inside fundamental packaging units: the nucleosomes. It is known that their positions are strongly influenced by the mechanical…”
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Benchmarking and refining probability-based models for nucleosome-DNA interaction
Published in BMC bioinformatics (07-03-2017)“…In investigations of nucleosome positioning preferences, a model that assigns an affinity to a given sequence is necessary to make predictions. One important…”
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Genomes of Multicellular Organisms Have Evolved to Attract Nucleosomes to Promoter Regions
Published in Biophysical journal (07-02-2017)“…Sequences that influence nucleosome positioning in promoter regions, and their relation to gene regulation, have been the topic of much research over the last…”
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Why Do Nucleosomes Unwrap Asymmetrically?
Published in The journal of physical chemistry. B (07-07-2016)“…Nucleosomes, DNA spools with a protein core, engage about three-quarters of eukaryotic DNA and play a critical role in chromosomal processes, ranging from gene…”
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The role of DNA sequence in nucleosome breathing
Published in The European physical journal. E, Soft matter and biological physics (30-11-2017)“… Roughly 3/4 of human genomes are sequestered by nucleosomes, DNA spools with a protein core, dictating a broad range of biological processes, ranging from…”
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Can Markov Chain Models Predict Nucleosome Positioning?
Published in Biophysical journal (16-02-2016)Get full text
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Sequence Dependent Plectoneme Dynamics
Published in Biophysical journal (27-01-2015)Get full text
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Constraining the neutron star equation of state with gravitational wave signals from coalescing binary neutron stars
Published 12-07-2015“…Phys. Rev. D 92, 023012 (2015) Recently exploratory studies were performed on the possibility of constraining the neutron star equation of state (EOS) using…”
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