Search Results - "Tomizawa, Tadashi"

KUJIRA, a package of integrated modules for systematic and interactive analysis of NMR data directed to high-throughput NMR structure studies by Kobayashi, Naohiro, Iwahara, Junji, Koshiba, Seizo, Tomizawa, Tadashi, Tochio, Naoya, Güntert, Peter, Kigawa, Takanori, Yokoyama, Shigeyuki

“…The recent expansion of structural genomics has increased the demands for quick and accurate protein structure determination by NMR spectroscopy. The…”
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Functional and structural basis of the nuclear localization signal in the ZIC3 zinc finger domain by Hatayama, Minoru, Tomizawa, Tadashi, Sakai-Kato, Kumiko, Bouvagnet, Patrice, Kose, Shingo, Imamoto, Naoko, Yokoyama, Shigeyuki, Utsunomiya-Tate, Naoko, Mikoshiba, Katsuhiko, Kigawa, Takanori, Aruga, Jun

“…Disruptions in ZIC3 cause heterotaxy, a congenital anomaly of the left–right axis. ZIC3 encodes a nuclear protein with a zinc finger (ZF) domain that contains…”
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NMR solution structures of actin depolymerizing factor homology domains by Goroncy, Alexander K., Koshiba, Seizo, Tochio, Naoya, Tomizawa, Tadashi, Sato, Manami, Inoue, Makato, Watanabe, Satoru, Hayashizaki, Yoshihide, Tanaka, Akiko, Kigawa, Takanori, Yokoyama, Shigeyuki

“…Actin is one of the most conserved proteins in nature. Its assembly and disassembly are regulated by many proteins, including the family of…”
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ZF21 Protein, a Regulator of the Disassembly of Focal Adhesions and Cancer Metastasis, Contains a Novel Noncanonical Pleckstrin Homology Domain by Nagano, Makoto, Hoshino, Daisuke, Koshiba, Seizo, Shuo, Takuya, Koshikawa, Naohiko, Tomizawa, Tadashi, Hayashi, Fumiaki, Tochio, Naoya, Harada, Takushi, Akizawa, Toshifumi, Watanabe, Satoru, Handa, Noriko, Shirouzu, Mikako, Kigawa, Takanori, Yokoyama, Shigeyuki, Seiki, Motoharu

“…Directional migration of adherent cells on an extracellular matrix requires repeated formation and disassembly of focal adhesions (FAs). Directional migration…”
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Solution structure of the C-terminal DUF1000 domain of the human thioredoxin-like 1 protein by Goroncy, Alexander K., Koshiba, Seizo, Tochio, Naoya, Tomizawa, Tadashi, Inoue, Makoto, Tanaka, Akiko, Sugano, Sumio, Kigawa, Takanori, Yokoyama, Shigeyuki

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Structure of the C-terminal Phosphotyrosine Interaction Domain of Fe65L1 Complexed with the Cytoplasmic Tail of Amyloid Precursor Protein Reveals a Novel Peptide Binding Mode by Li, Hua, Koshiba, Seizo, Hayashi, Fumiaki, Tochio, Naoya, Tomizawa, Tadashi, Kasai, Takuma, Yabuki, Takashi, Motoda, Yoko, Harada, Takushi, Watanabe, Satoru, Inoue, Makoto, Hayashizaki, Yoshihide, Tanaka, Akiko, Kigawa, Takanori, Yokoyama, Shigeyuki

“…Fe65L1, a member of the Fe65 family, is an adaptor protein that interacts with the cytoplasmic domain of Alzheimer amyloid precursor protein (APP) through its…”
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Structural basis for controlling the dimerization and stability of the WW domains of an atypical subfamily by Ohnishi, Satoshi, Tochio, Naoya, Tomizawa, Tadashi, Akasaka, Ryogo, Harada, Takushi, Seki, Eiko, Sato, Manami, Watanabe, Satoru, Fujikura, Yukiko, Koshiba, Seizo, Terada, Takaho, Shirouzu, Mikako, Tanaka, Akiko, Kigawa, Takanori, Yokoyama, Shigeyuki

“…The second WW domain in mammalian Salvador protein (SAV1 WW2) is quite atypical, as it forms a β‐clam‐like homodimer. The second WW domain in human MAGI1…”
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Structural basis for the recognition of nucleophosmin-anaplastic lymphoma kinase oncoprotein by the phosphotyrosine binding domain of Suc1-associated neurotrophic factor-induced tyrosine-phosphorylated target-2 by Koshiba, Seizo, Li, Hua, Motoda, Yoko, Tomizawa, Tadashi, Kasai, Takuma, Tochio, Naoya, Yabuki, Takashi, Harada, Takushi, Watanabe, Satoru, Tanaka, Akiko, Shirouzu, Mikako, Kigawa, Takanori, Yamamoto, Tadashi, Yokoyama, Shigeyuki

“…The nucleophosmin-anaplastic lymphoma kinase (NPM-ALK) fusion oncoprotein, formed by the t(2;5) chromosomal translocation in anaplastic large-cell lymphomas,…”
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Contribution of solvent water to the solution X-ray scattering profile of proteins by Seki, Yasutaka, Tomizawa, Tadashi, Khechinashvili, Nikolay N., Soda, Kunitsugu

“…A theoretical framework is presented to analyze how solvent water contributes to the X-ray scattering profile of protein solution. Molecular dynamics…”
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Letter to the Editor: NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana by López-Méndez, Blanca, Pantoja-Uceda, David, Tomizawa, Tadashi, Koshiba, Seizo, Kigawa, Takanori, Shirouzu, Mikako, Terada, Takaho, Inoue, Makoto, Yabuki, Takashi, Aoki, Masaaki, Seki, Eiko, Matsuda, Takayoshi, Hirota, Hiroshi, Yoshida, Mayumi, Tanaka, Akiko, Osanai, Takashi, Seki, Motoaki, Shinozaki, Kazuo, Yokoyama, Shigeyuki, Güntert, Peter

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Global Structure Analysis of Acid-Unfolded Myoglobin with Consideration to Effects of Intermolecular Coulomb Repulsion on Solution X-ray Scattering by Seki, Yasutaka, Tomizawa, Tadashi, Hiragi, Yuzuru, Soda, Kunitsugu

“…To obtain information on the global structure of protein in the acid-unfolded (AU) state, the structure of apomyoglobin (apoMb) was analyzed by using the…”
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Solution structure of the C-terminal DUF1000 domain of the human thioredoxin-like 1 protein: NMR Solution Structure of DUF1000 Domain by Goroncy, Alexander K., Koshiba, Seizo, Tochio, Naoya, Tomizawa, Tadashi, Inoue, Makoto, Tanaka, Akiko, Sugano, Sumio, Kigawa, Takanori, Yokoyama, Shigeyuki

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Solution structure of an atypical WW domain in a novel β-clam-like dimeric form by Ohnishi, Satoshi, Güntert, Peter, Koshiba, Seizo, Tomizawa, Tadashi, Akasaka, Ryogo, Tochio, Naoya, Sato, Manami, Inoue, Makoto, Harada, Takushi, Watanabe, Satoru, Tanaka, Akiko, Shirouzu, Mikako, Kigawa, Takanori, Yokoyama, Shigeyuki

“…The WW domain is known as one of the smallest protein modules with a triple-stranded β-sheet fold. Here, we present the solution structure of the second WW…”
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NMR solution structures of the five constituent cold-shock domains (CSD) of the human UNR (upstream of N-ras) protein by Goroncy, Alexander K, Koshiba, Seizo, Tochio, Naoya, Tomizawa, Tadashi, Inoue, Makato, Watanabe, Satoru, Harada, Takushi, Tanaka, Akiko, Ohara, Osamu, Kigawa, Takanori, Yokoyama, Shigeyuki

“…Upon cold shock, the amounts of most proteins dramatically decrease from normal levels, but those of cold shock proteins (CSPs) and proteins containing…”
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Erratum to: The NMR solution structures of the five constituent cold-shock domains (CSD) of the human UNR (upstream of N-ras) protein by Goroncy, Alexander K., Koshiba, Seizo, Tochio, Naoya, Tomizawa, Tadashi, Inoue, Makoto, Watanabe, Satoru, Harada, Takushi, Tanaka, Akiko, Ohara, Osamu, Kigawa, Takanori, Yokoyama, Shigeyuki

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NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana by López-Méndez, Blanca, Pantoja-Uceda, David, Tomizawa, Tadashi, Koshiba, Seizo, Kigawa, Takanori, Shirouzu, Mikako, Terada, Takaho, Inoue, Makoto, Yabuki, Takashi, Aoki, Masaaki, Seki, Eiko, Matsuda, Takayoshi, Hirota, Hiroshi, Yoshida, Mayumi, Tanaka, Akiko, Osanai, Takashi, Seki, Motoaki, Shinozaki, Kazuo, Yokoyama, Shigeyuki, Güntert, Peter

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Synthesis of Ring-Fluorinated Porphyrins and Reconstitutional Myoglobins with Their Iron Complexes by Suzuki, Akihiro, Tomizawa, Tadashi, Hayashi, Takashi, Mizutani, Tadashi, Ogoshi, Hisanobu

“…The total syntheses of monofluoroporphyrin derivatives from monofluoropyrroles and the reconstitution of synthetic heme into sperm-whale myoglobin are…”
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