Search Results - "Tohge, Takayuki"

From Fruit Omics to Fruiting Omics: Systematic Studies of Tomato Fruiting by Metabolic Networks by Tohge, Takayuki

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Trichoderma-plant root colonization: escaping early plant defense responses and activation of the antioxidant machinery for saline stress tolerance by Brotman, Yariv, Landau, Udi, Cuadros-Inostroza, Álvaro, Tohge, Takayuki, Takayuki, Tohge, Fernie, Alisdair R, Chet, Ilan, Viterbo, Ada, Willmitzer, Lothar

“…Trichoderma spp. are versatile opportunistic plant symbionts which can colonize the apoplast of plant roots. Microarrays analysis of Arabidopsis thaliana roots…”
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The Genetics of Plant Metabolism by Fernie, Alisdair R, Tohge, Takayuki

“…Plant metabolic studies have traditionally focused on the role and regulation of the enzymes catalyzing key reactions within specific pathways. Within the past…”
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Current understanding of the pathways of flavonoid biosynthesis in model and crop plants by Tohge, Takayuki, de Souza, Leonardo Perez, Fernie, Alisdair R.

“…Flavonoids are a signature class of secondary metabolites formed from a relatively simple collection of scaffolds. They are extensively decorated by chemical…”
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Leveraging Natural Variance towards Enhanced Understanding of Phytochemical Sunscreens by Tohge, Takayuki, Fernie, Alisdair R.

“…The dependency of plants on sunlight renders exposure to UV a constant hazard. Light of this wavelength is damaging to proteins, RNA, and DNA, with damage to…”
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The flavonoid biosynthetic pathway in Arabidopsis: Structural and genetic diversity by Saito, Kazuki, Yonekura-Sakakibara, Keiko, Nakabayashi, Ryo, Higashi, Yasuhiro, Yamazaki, Mami, Tohge, Takayuki, Fernie, Alisdair R.

“…Flavonoids are representative plant secondary products. In the model plant Arabidopsis thaliana, at least 54 flavonoid molecules (35 flavonols, 11 anthocyanins…”
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Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices by Alseekh, Saleh, Aharoni, Asaph, Brotman, Yariv, Contrepois, Kévin, D’Auria, John, Ewald, Jan, C. Ewald, Jennifer, Fraser, Paul D., Giavalisco, Patrick, Hall, Robert D., Heinemann, Matthias, Link, Hannes, Luo, Jie, Neumann, Steffen, Nielsen, Jens, Perez de Souza, Leonardo, Saito, Kazuki, Sauer, Uwe, Schroeder, Frank C., Schuster, Stefan, Siuzdak, Gary, Skirycz, Aleksandra, Sumner, Lloyd W., Snyder, Michael P., Tang, Huiru, Tohge, Takayuki, Wang, Yulan, Wen, Weiwei, Wu, Si, Xu, Guowang, Zamboni, Nicola, Fernie, Alisdair R.

“…Mass spectrometry-based metabolomics approaches can enable detection and quantification of many thousands of metabolite features simultaneously. However,…”
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Enhancement of oxidative and drought tolerance in Arabidopsis by overaccumulation of antioxidant flavonoids by Nakabayashi, Ryo, Yonekura‐Sakakibara, Keiko, Urano, Kaoru, Suzuki, Makoto, Yamada, Yutaka, Nishizawa, Tomoko, Matsuda, Fumio, Kojima, Mikiko, Sakakibara, Hitoshi, Shinozaki, Kazuo, Michael, Anthony J, Tohge, Takayuki, Yamazaki, Mami, Saito, Kazuki

“…The notion that plants use specialized metabolism to protect against environmental stresses needs to be experimentally proven by addressing the question of…”
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Flavonoids are determinants of freezing tolerance and cold acclimation in Arabidopsis thaliana by Schulz, Elisa, Tohge, Takayuki, Zuther, Ellen, Fernie, Alisdair R., Hincha, Dirk K.

“…In plants from temperate climates such as Arabidopsis thaliana low, non-freezing temperatures lead to increased freezing tolerance in a process termed cold…”
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Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function by Fernie, Alisdair R, Tohge, Takayuki

“…Given the ever-increasing number of species for which full-genome sequencing has been realized, there is a rising burden for gene functional annotation. In…”
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Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data by LOHSE, MARC, NAGEL, AXEL, HERTER, THOMAS, MAY, PATRICK, SCHRODA, MICHAEL, ZRENNER, RITA, TOHGE, TAKAYUKI, FERNIE, ALISDAIR R, STITT, MARK, USADEL, BJÖRN

“…Next‐generation technologies generate an overwhelming amount of gene sequence data. Efficient annotation tools are required to make these data amenable to…”
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Multi-level engineering facilitates the production of phenylpropanoid compounds in tomato by Zhang, Yang, Butelli, Eugenio, Alseekh, Saleh, Tohge, Takayuki, Rallapalli, Ghanasyam, Luo, Jie, Kawar, Prashant G., Hill, Lionel, Santino, Angelo, Fernie, Alisdair R., Martin, Cathie

“…Phenylpropanoids comprise an important class of plant secondary metabolites. A number of transcription factors have been used to upregulate-specific branches…”
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Differentially evolved glucosyltransferases determine natural variation of rice flavone accumulation and UV-tolerance by Peng, Meng, Shahzad, Raheel, Gul, Ambreen, Subthain, Hizar, Shen, Shuangqian, Lei, Long, Zheng, Zhigang, Zhou, Junjie, Lu, Dandan, Wang, Shouchuang, Nishawy, Elsayed, Liu, Xianqing, Tohge, Takayuki, Fernie, Alisdair R., Luo, Jie

“…Decoration of phytochemicals contributes to the majority of metabolic diversity in nature, whereas how this process alters the biological functions of their…”
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Overexpression of the vascular brassinosteroid receptor BRL3 confers drought resistance without penalizing plant growth by Fàbregas, Norma, Lozano-Elena, Fidel, Blasco-Escámez, David, Tohge, Takayuki, Martínez-Andújar, Cristina, Albacete, Alfonso, Osorio, Sonia, Bustamante, Mariana, Riechmann, José Luis, Nomura, Takahito, Yokota, Takao, Conesa, Ana, Alfocea, Francisco Pérez, Fernie, Alisdair R., Caño-Delgado, Ana I.

“…Drought represents a major threat to food security. Mechanistic data describing plant responses to drought have been studied extensively and genes conferring…”
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On the regulation and function of secondary metabolism during fruit development and ripening by Tohge, Takayuki, Alseekh, Saleh, Fernie, Alisdair R

“…We review advances in tomato secondary metabolism (carotenoids, polyphenols, volatile organic compounds, and alkaloids) focusing on the use of metabolomics…”
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The evolution of phenylpropanoid metabolism in the green lineage by Tohge, Takayuki, Watanabe, Mutsumi, Hoefgen, Rainer, Fernie, Alisdair R

“…Phenolic secondary metabolites are only produced by plants wherein they play important roles in both biotic and abiotic defense in seed plants as well as being…”
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Global Analysis of the Role of Autophagy in Cellular Metabolism and Energy Homeostasis in Arabidopsis Seedlings under Carbon Starvation by Avin-Wittenberg, Tamar, Bajdzienko, Krzysztof, Wittenberg, Gal, Alseekh, Saleh, Tohge, Takayuki, Bock, Ralph, Giavalisco, Patrick, Fernie, Alisdair R.

“…Germination and early seedling establishment are developmental stages in which plants face limited nutrient supply as their photosynthesis mechanism is not yet…”
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Genetic Manipulation of Transcriptional Regulators Alters Nicotine Biosynthesis in Tobacco by Hayashi, Shunya, Watanabe, Mutsumi, Kobayashi, Makoto, Tohge, Takayuki, Hashimoto, Takashi, Shoji, Tsubasa

“…Abstract The toxic alkaloid nicotine is produced in the roots of Nicotiana species and primarily accumulates in leaves as a specialized metabolite. A series of…”
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Natural variation in flavonol and anthocyanin metabolism during cold acclimation in Arabidopsis thaliana accessions by SCHULZ, ELISA, TOHGE, TAKAYUKI, ZUTHER, ELLEN, FERNIE, ALISDAIR R., HINCHA, DIRK K.

“…In plants from temperate climates such as Arabidopsis thaliana, low, non‐freezing temperatures lead to increased freezing tolerance in a process termed cold…”
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Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida by Ferrari, Camilla, Proost, Sebastian, Janowski, Marcin, Becker, Jörg, Nikoloski, Zoran, Bhattacharya, Debashish, Price, Dana, Tohge, Takayuki, Bar-Even, Arren, Fernie, Alisdair, Stitt, Mark, Mutwil, Marek

“…Plants have adapted to the diurnal light-dark cycle by establishing elaborate transcriptional programs that coordinate many metabolic, physiological, and…”
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