Search Results - "Tiwary, Shivani"

High-quality MS/MS spectrum prediction for data-dependent and data-independent acquisition data analysis by Tiwary, Shivani, Levy, Roie, Gutenbrunner, Petra, Salinas Soto, Favio, Palaniappan, Krishnan K., Deming, Laura, Berndl, Marc, Brant, Arthur, Cimermancic, Peter, Cox, Jürgen

“…Peptide fragmentation spectra are routinely predicted in the interpretation of mass-spectrometry-based proteomics data. However, the generation of fragment…”
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The PRIDE database and related tools and resources in 2019: improving support for quantification data by Perez-Riverol, Yasset, Csordas, Attila, Bai, Jingwen, Bernal-Llinares, Manuel, Hewapathirana, Suresh, Kundu, Deepti J, Inuganti, Avinash, Griss, Johannes, Mayer, Gerhard, Eisenacher, Martin, Pérez, Enrique, Uszkoreit, Julian, Pfeuffer, Julianus, Sachsenberg, Timo, Yılmaz, Şule, Tiwary, Shivani, Cox, Jürgen, Audain, Enrique, Walzer, Mathias, Jarnuczak, Andrew F, Ternent, Tobias, Brazma, Alvis, Vizcaíno, Juan Antonio

“…Abstract The PRoteomics IDEntifications (PRIDE) database (https://www.ebi.ac.uk/pride/) is the world’s largest data repository of mass spectrometry-based…”
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Role for ribosome-associated quality control in sampling proteins for MHC class I-mediated antigen presentation by Trentini, Débora Broch, Pecoraro, Matteo, Tiwary, Shivani, Cox, Jürgen, Mann, Matthias, Hipp, Mark S., Hartl, F. Ulrich

“…Mammalian cells present a fingerprint of their proteome to the adaptive immune system through the display of endogenous peptides on MHC-I complexes…”
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Glioblastoma cell secretome: Analysis of three glioblastoma cell lines reveal 148 non-redundant proteins by Polisetty, Ravindra V., Gupta, Manoj Kumar, Nair, Sudha C., Ramamoorthy, Kalidoss, Tiwary, Shivani, Shiras, Anjali, Chandak, Giriraj R., Sirdeshmukh, Ravi

“…Glioblastoma multiforme (GBM) is the most aggressive among human gliomas with poor prognosis. Study of tumor cell secretome – proteins secreted by cancer cell…”
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The dental proteome of Homo antecessor by Welker, Frido, Ramos-Madrigal, Jazmín, Gutenbrunner, Petra, Mackie, Meaghan, Tiwary, Shivani, Rakownikow Jersie-Christensen, Rosa, Chiva, Cristina, Dickinson, Marc R., Kuhlwilm, Martin, de Manuel, Marc, Gelabert, Pere, Martinón-Torres, María, Margvelashvili, Ann, Arsuaga, Juan Luis, Carbonell, Eudald, Marques-Bonet, Tomas, Penkman, Kirsty, Sabidó, Eduard, Cox, Jürgen, Olsen, Jesper V., Lordkipanidze, David, Racimo, Fernando, Lalueza-Fox, Carles, Bermúdez de Castro, José María, Willerslev, Eske, Cappellini, Enrico

“…The phylogenetic relationships between hominins of the Early Pleistocene epoch in Eurasia, such as Homo antecessor , and hominins that appear later in the…”
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Proteogenomic Analysis of Breast Cancer Transcriptomic and Proteomic Data, Using De Novo Transcript Assembly: Genome-Wide Identification of Novel Peptides and Clinical Implications by Hari, P.S., Balakrishnan, Lavanya, Kotyada, Chaithanya, Everad John, Arivusudar, Tiwary, Shivani, Shah, Nameeta, Sirdeshmukh, Ravi

“…We have carried out proteogenomic analysis of the breast cancer transcriptomic and proteomic data, available at The Clinical Proteomic Tumor Analysis…”
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MaxQuant goes Linux by Sinitcyn, Pavel, Tiwary, Shivani, Rudolph, Jan, Gutenbrunner, Petra, Wichmann, Christoph, Yılmaz, Şule, Hamzeiy, Hamid, Salinas, Favio, Cox, Jürgen

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Author Correction: The dental proteome of Homo antecessor by Welker, Frido, Ramos-Madrigal, Jazmín, Gutenbrunner, Petra, Mackie, Meaghan, Tiwary, Shivani, Jersie-Christensen, Rosa Rakownikow, Chiva, Cristina, Dickinson, Marc R., Kuhlwilm, Martin, de Manuel, Marc, Gelabert, Pere, Martinón-Torres, María, Margvelashvili, Ann, Arsuaga, Juan Luis, Carbonell, Eudald, Marques-Bonet, Tomas, Penkman, Kirsty, Sabidó, Eduard, Cox, Jürgen, Olsen, Jesper V., Lordkipanidze, David, Racimo, Fernando, Lalueza-Fox, Carles, de Castro, José María Bermúdez, Willerslev, Eske, Cappellini, Enrico

“…An amendment to this paper has been published and can be accessed via a link at the top of the paper…”
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Secretome analysis of Glioblastoma cell line--HNGC-2 by Gupta, Manoj Kumar, Polisetty, Ravindra Varma, Ramamoorthy, Kalidoss, Tiwary, Shivani, Kaur, Navjot, Uppin, Megha S, Shiras, Anjali, Sirdeshmukh, Ravi

“…Glioblastoma multiforme (GBM) is the most common and aggressive type of primary malignant tumor of the central nervous system. We have carried out a deep…”
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Designing of an application for group based coordination for information exchange in Ad-hoc networks by Sachdeva, Tina, Aakanksha, Garg, Neha, Digari, Shivani, Kaira, Himani, Tiwary, Shivani, Dolly, Kaur, Neerajpreet, Goel, Bhavna, Naib, Priya, Jain, Chhavi, Jain, Shivani, Rajan, Shreyta

“…This paper presents the design and implementation of an Android based application named ComFree for group based coordination for information exchange in ad-hoc…”
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