Search Results - "Timmer, J."

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  1. 1

    Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood by Raue, A., Kreutz, C., Maiwald, T., Bachmann, J., Schilling, M., Klingmüller, U., Timmer, J.

    Published in Bioinformatics (01-08-2009)
    “…Motivation: Mathematical description of biological reaction networks by differential equations leads to large models whose parameters are calibrated in order…”
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    Journal Article
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    Caspase substrates by Timmer, J C, Salvesen, G S

    Published in Cell death and differentiation (01-01-2007)
    “…The relatively common occurrence of sequences within proteins that match the consensus substrate specificity of caspases in intracellular proteins suggests a…”
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    Journal Article
  4. 4

    Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems by Raue, A, Steiert, B, Schelker, M, Kreutz, C, Maiwald, T, Hass, H, Vanlier, J, Tönsing, C, Adlung, L, Engesser, R, Mader, W, Heinemann, T, Hasenauer, J, Schilling, M, Höfer, T, Klipp, E, Theis, F, Klingmüller, U, Schöberl, B, Timmer, J

    Published in Bioinformatics (01-11-2015)
    “…Modeling of dynamical systems using ordinary differential equations is a popular approach in the field of systems biology. Two of the most critical steps in…”
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    Journal Article
  5. 5

    Electronic Influence of the 2,2′-Bipyridine-6,6′-dicarboxylate Ligand in Ru-Based Molecular Water Oxidation Catalysts by Timmer, Brian J. J, Kravchenko, Oleksandr, Zhang, Biaobiao, Liu, Tianqi, Sun, Licheng

    Published in Inorganic chemistry (18-01-2021)
    “…Water provides an ideal source for the production of protons and electrons required for generation of renewable fuels. Among the most-prominent…”
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  6. 6

    Data-based identifiability analysis of non-linear dynamical models by Hengl, S., Kreutz, C., Timmer, J., Maiwald, T.

    Published in Bioinformatics (01-10-2007)
    “…Motivation: Mathematical modelling of biological systems is becoming a standard approach to investigate complex dynamic, non-linear interaction mechanisms in…”
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    Journal Article
  7. 7

    Preorganized Frustrated Lewis Pairs by Bertini, Federica, Lyaskovskyy, Volodymyr, Timmer, Brian J. J, de Kanter, Frans J. J, Lutz, Martin, Ehlers, Andreas W, Slootweg, J. Chris, Lammertsma, Koop

    Published in Journal of the American Chemical Society (11-01-2012)
    “…Geminal frustrated Lewis pairs (FLPs) are expected to exhibit increased reactivity when the donor and acceptor sites are perfectly aligned. This is shown for…”
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  8. 8

    Identifiability and observability analysis for experimental design in nonlinear dynamical models by Raue, A, Becker, V, Klingmüller, U, Timmer, J

    Published in Chaos (Woodbury, N.Y.) (01-12-2010)
    “…Dynamical models of cellular processes promise to yield new insights into the underlying systems and their biological interpretation. The processes are usually…”
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    Journal Article
  9. 9

    Water Oxidation Initiated by In Situ Dimerization of the Molecular Ru(pdc) Catalyst by Daniel, Quentin, Duan, Lele, Timmer, Brian J. J, Chen, Hong, Luo, Xiaodan, Ambre, Ram, Wang, Ying, Zhang, Biaobiao, Zhang, Peili, Wang, Lei, Li, Fusheng, Sun, Junliang, Ahlquist, Mårten, Sun, Licheng

    Published in ACS catalysis (04-05-2018)
    “…The mononuclear ruthenium complex [Ru­(pdc)­L3] (H2pdc = 2,6-pyridinedicarboxylic acid, L = N-heterocycles such as 4-picoline) has previously shown promising…”
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    Journal Article
  10. 10

    Simple and Effective Integration of Green Chemistry and Sustainability Education into an Existing Organic Chemistry Course by Timmer, Brian J. J, Schaufelberger, Fredrik, Hammarberg, Daniel, Franzén, Johan, Ramström, Olof, Dinér, Peter

    Published in Journal of chemical education (14-08-2018)
    “…Green chemistry and sustainable development have become increasingly important topics for the education of future chemists. The cross-disciplinary nature of…”
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    Journal Article
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    Multi-resource emergency supply contracts with asymmetric information in the after-sales services by Rahimi-Ghahroodi, S., Al Hanbali, A., Zijm, W.H.M., Timmer, J.B.

    “…In this paper, we investigate the contract design in a multi-resource service supply chain between a first line service provider and an emergency supplier…”
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    Journal Article
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    MRSA Infections in HIV-Infected People Are Associated with Decreased MRSA-Specific Th1 Immunity by Utay, Netanya S, Roque, Annelys, Timmer, J Katherina, Morcock, David R, DeLeage, Claire, Somasunderam, Anoma, Weintrob, Amy C, Agan, Brian K, Estes, Jacob D, Crum-Cianflone, Nancy F, Douek, Daniel C

    Published in PLoS pathogens (01-04-2016)
    “…People with HIV infection are at increased risk for community-acquired methicillin-resistant Staphylococcus aureus (CA-MRSA) skin and soft tissue infections…”
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    Journal Article
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    Emergency supply contracts for a service provider with limited local resources by Rahimi-Ghahroodi, S., Al Hanbali, A., Zijm, W.H.M., Timmer, J.B.

    Published in Reliability engineering & system safety (01-09-2019)
    “…•Smart and novel contract models in the upstream echelon of after-sales service networks.•Combination of coordinated contracting and integrated resource…”
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    Journal Article
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    A Unified Approach to the Helioseismic Inversion Problem of the Solar Meridional Flow from Global Oscillations by Schad, A, Timmer, J, Roth, M

    Published in The Astrophysical journal (20-06-2011)
    “…Measurements from tracers and local helioseismology indicate the existence of a meridional flow in the Sun with strength in the order of 15 m s--1 near the…”
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    Comprehensive estimation of input signals and dynamics in biochemical reaction networks by Schelker, M, Raue, A, Timmer, J, Kreutz, C

    Published in Bioinformatics (15-09-2012)
    “…Cellular information processing can be described mathematically using differential equations. Often, external stimulation of cells by compounds such as drugs…”
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    Journal Article
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    Identification of Nucleocytoplasmic Cycling as a Remote Sensor in Cellular Signaling by Databased Modeling by Swameye, I., Müller, T. G., Timmer, J., Sandra, O., Klingmüller, U.

    “…Considerable progress has been made in identifying the molecular composition of complex signaling networks controlling cell proliferation, differentiation, and…”
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  18. 18

    Predictive mathematical models of cancer signalling pathways by Bachmann, J., Raue, A., Schilling, M., Becker, V., Timmer, J., Klingmüller, U.

    Published in Journal of internal medicine (01-02-2012)
    “…  Bachmann J, Raue A, Schilling M, Becker V, Timmer J, Klingmüller U (German Cancer Research Center, Heidelberg; BIOSS Centre for Biological Signalling…”
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    Journal Article Conference Proceeding
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    Addressing parameter identifiability by model-based experimentation by Raue, A, Kreutz, C, Maiwald, T, Klingmuller, U, Timmer, J

    Published in IET systems biology (01-03-2011)
    “…Mathematical description of biological processes such as gene regulatory networks or signalling pathways by dynamic models utilising ordinary differential…”
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    Journal Article
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    Off‐Set Interactions of Ruthenium–bda Type Catalysts for Promoting Water‐Splitting Performance by Timmer, Brian J. J., Kravchenko, Oleksandr, Liu, Tianqi, Zhang, Biaobiao, Sun, Licheng

    Published in Angewandte Chemie (21-06-2021)
    “…O−O bond formation with Ru(bda)L2‐type catalysts is well‐known to proceed through a bimolecular reaction pathway, limiting the potential application of these…”
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    Journal Article