Search Results - "Thompson, Elaine E"

Chromosomal stability of mesenchymal stromal cells during in vitro culture by Stultz, Brian G, McGinnis, Kathleen, Thompson, Elaine E, Lo Surdo, Jessica L, Bauer, Steven R, Hursh, Deborah A

“…Abstract Background aims Mesenchymal stromal cells (MSCs) are being investigated for use in cell therapy. The extensive in vitro expansion necessary to obtain…”
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Deep learning models for histologic grading of breast cancer and association with disease prognosis by Jaroensri, Ronnachai, Wulczyn, Ellery, Hegde, Narayan, Brown, Trissia, Flament-Auvigne, Isabelle, Tan, Fraser, Cai, Yuannan, Nagpal, Kunal, Rakha, Emad A., Dabbs, David J., Olson, Niels, Wren, James H., Thompson, Elaine E., Seetao, Erik, Robinson, Carrie, Miao, Melissa, Beckers, Fabien, Corrado, Greg S., Peng, Lily H., Mermel, Craig H., Liu, Yun, Steiner, David F., Chen, Po-Hsuan Cameron

“…Histologic grading of breast cancer involves review and scoring of three well-established morphologic features: mitotic count, nuclear pleomorphism, and tubule…”
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Independent assessment of a deep learning system for lymph node metastasis detection on the Augmented Reality Microscope by Jin, David, Rosenthal, Joseph H., Thompson, Elaine E., Dunnmon, Jared, Mohtashamian, Arash, Ward, Daniel, Austin, Ryan, Tetteh, Hassan, Olson, Niels H.

“…Several machine learning algorithms have demonstrated high predictive capability in the identification of cancer within digitized pathology slides. The…”
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Preclinical safety and biodistribution of CRISPR targeting SIV in non-human primates by Burdo, Tricia H., Chen, Chen, Kaminski, Rafal, Sariyer, Ilker K., Mancuso, Pietro, Donadoni, Martina, Smith, Mandy D., Sariyer, Rahsan, Caocci, Maurizio, Liao, Shuren, Liu, Hong, Huo, Wenwen, Zhao, Huaqing, Misamore, John, Lewis, Mark G., Simonyan, Vahan, Thompson, Elaine E., Xu, Ethan Y., Cradick, Thomas J., Gordon, Jennifer, Khalili, Kamel

“…In this study, we demonstrate the safety and utility of CRISPR-Cas9 gene editing technology for in vivo editing of proviral DNA in ART-treated, virally…”
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Correction: Preclinical safety and biodistribution of CRISPR targeting SIV in non-human primates by Burdo, Tricia H., Chen, Chen, Kaminski, Rafal, Sariyer, Ilker K., Mancuso, Pietro, Donadoni, Martina, Smith, Mandy D., Sariyer, Rahsan, Caocci, Maurizio, Liao, Shuren, Liu, Hong, Huo, Wenwen, Zhao, Huaqing, Misamore, John, Lewis, Mark G., Simonyan, Vahan, Thompson, Elaine E., Xu, Ethan Y., Cradick, Thomas J., Gordon, Jennifer, Khalili, Kamel

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DOT2: Macromolecular docking with improved biophysical models by Roberts, Victoria A., Thompson, Elaine E., Pique, Michael E., Perez, Martin S., Ten Eyck, L. F.

“…Computational docking is a useful tool for predicting macromolecular complexes, which are often difficult to determine experimentally. Here, we present the…”
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Using machine learning to improve anaphylaxis case identification in medical claims data by Kural, Kamil Can, Mazo, Ilya, Walderhaug, Mark, Santana-Quintero, Luis, Karagiannis, Konstantinos, Thompson, Elaine E, Kelman, Jeffrey A, Goud, Ravi

“…Anaphylaxis is a severe life-threatening allergic reaction, and its accurate identification in healthcare databases can harness the potential of "Big Data" for…”
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Using machine learning to improve anaphylaxis case identification in medical claims data by Kural, Kamil Can, Mazo, Ilya, Walderhaug, Mark, Santana-Quintero, Luis, Karagiannis, Konstantinos, Thompson, Elaine E, Kelman, Jeffrey A, Goud, Ravi

“…Anaphylaxis is a severe life-threatening allergic reaction, and its accurate identification in healthcare databases can harness the potential of "Big Data" for…”
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In vitro cytokine licensing induces persistent permissive chromatin at the Indoleamine 2,3-dioxygenase promoter by Rovira Gonzalez, Yazmin I, Lynch, Patrick J, Thompson, Elaine E, Stultz, Brian G, Hursh, Deborah A

“…Abstract Background Mesenchymal stromal cells (MSCs) are being investigated as therapies for inflammatory diseases due to their immunosuppressive capacity…”
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Chromatin Changes at the PPAR‐γ2 Promoter During Bone Marrow‐Derived Multipotent Stromal Cell Culture Correlate With Loss of Gene Activation Potential by Lynch, Patrick J., Thompson, Elaine E., McGinnis, Kathleen, Rovira Gonzalez, Yazmin I., Lo Surdo, Jessica, Bauer, Steven R., Hursh, Deborah A.

“…Bone marrow‐derived multipotent stromal cells (BM‐MSCs) display a broad range of therapeutically valuable properties, including the capacity to form skeletal…”
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High-performance integrated virtual environment (HIVE): a robust infrastructure for next-generation sequence data analysis by Simonyan, Vahan, Chumakov, Konstantin, Dingerdissen, Hayley, Faison, William, Goldweber, Scott, Golikov, Anton, Gulzar, Naila, Karagiannis, Konstantinos, Vinh Nguyen Lam, Phuc, Maudru, Thomas, Muravitskaja, Olesja, Osipova, Ekaterina, Pan, Yang, Pschenichnov, Alexey, Rostovtsev, Alexandre, Santana-Quintero, Luis, Smith, Krista, Thompson, Elaine E, Tkachenko, Valery, Torcivia-Rodriguez, John, Voskanian, Alin, Wan, Quan, Wang, Jing, Wu, Tsung-Jung, Wilson, Carolyn, Mazumder, Raja

“…The High-performance Integrated Virtual Environment (HIVE) is a distributed storage and compute environment designed primarily to handle next-generation…”
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Chromatin Changes at the PPAR- gamma 2 Promoter During Bone Marrow-Derived Multipotent Stromal Cell Culture Correlate With Loss of Gene Activation Potential by Lynch, Patrick J, Thompson, Elaine E, McGinnis, Kathleen, Rovira Gonzalez, Yazmin I, Lo Surdo, Jessica, Bauer, Steven R, Hursh, Deborah A

“…Bone marrow-derived multipotent stromal cells (BM-MSCs) display a broad range of therapeutically valuable properties, including the capacity to form skeletal…”
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Comparative surface geometry of the protein kinase family by Thompson, Elaine E., Kornev, Alexandr P., Kannan, Natarajan, Kim, Choel, Ten Eyck, Lynn F., Taylor, Susan S.

“…Identifying conserved pockets on the surfaces of a family of proteins can provide insight into conserved geometric features and sites of protein–protein…”
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RETRACTED AND REPLACED: Using machine learning to improve anaphylaxis case identification in medical claims data by Kural, Kamil Can, Mazo, Ilya, Walderhaug, Mark, Santana-Quintero, Luis, Karagiannis, Konstantinos, Thompson, Elaine E, Kelman, Jeffrey A, Goud, Ravi

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Enabling precision medicine via standard communication of HTS provenance, analysis, and results by Alterovitz, Gil, Dean, Dennis, Goble, Carole, Crusoe, Michael R, Soiland-Reyes, Stian, Bell, Amanda, Hayes, Anais, Suresh, Anita, Purkayastha, Anjan, King, Charles H, Taylor, Dan, Johanson, Elaine, Thompson, Elaine E, Donaldson, Eric, Morizono, Hiroki, Tsang, Hsinyi, Vora, Jeet K, Goecks, Jeremy, Yao, Jianchao, Almeida, Jonas S, Keeney, Jonathon, Addepalli, KanakaDurga, Krampis, Konstantinos, Smith, Krista M, Guo, Lydia, Walderhaug, Mark, Schito, Marco, Ezewudo, Matthew, Guimera, Nuria, Walsh, Paul, Kahsay, Robel, Gottipati, Srikanth, Rodwell, Timothy C, Bloom, Toby, Lai, Yuching, Simonyan, Vahan, Mazumder, Raja

“…A personalized approach based on a patient's or pathogen's unique genomic sequence is the foundation of precision medicine. Genomic findings must be robust and…”
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Abstract 5357: Estrogen receptor gene expression prediction from H&E-stained whole slide images by Srinivas, Anvita A., Jaroensri, Ronnachai, Wulczyn, Ellery, Wren, James H., Thompson, Elaine E., Olson, Niels, Beckers, Fabien, Miao, Melissa, Liu, Yun, Chen, Cameron, Steiner, David F.

“…Abstract Gene expression profiling (GEP) represents an important approach to inform breast cancer treatment. However, access to GEP involves challenges…”
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In Vitro Cytokine Licensing Induces Persistent Permissive Chromatin at the IDO1 Promoter by Rovira Gonzalez, Yazmin I., Lynch, Patrick J., Thompson, Elaine E., Stultz, Brian G., Hursh, Deborah A.

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Chromatin Changes at the PPAR-[gamma]2 Promoter During Bone Marrow-Derived Multipotent Stromal Cell Culture Correlate With Loss of Gene Activation Potential by Lynch, Patrick J, Thompson, Elaine E, McGinnis, Kathleen, Rovira Gonzalez, Yazmin I, Lo Surdo, Jessica, Bauer, Steven R, Hursh, Deborah A

“…Bone marrow-derived multipotent stromal cells (BM-MSCs) display a broad range of therapeutically valuable properties, including the capacity to form skeletal…”
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Differential effects of left versus right seizure focus on human hippocampal evoked responses by Meador, K J, Loring, D W, Gallagher, B B, King, D W, Murro, A M, Thompson, E E, Lee, G P, Flanigin, H F, Smith, J R, Dushku, J

“…Hippocampal evoked potentials were recorded using the P3 tonal oddball paradigm in 30 patients with unilateral temporal lobe seizure focus. Spectral power of…”
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A comparison of prejudices: the effects upon friendship ratings of chronic illness, old age, education, and race by Long, B H, Ziller, R C, Thompson, E E

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