Search Results - "Thompson, Carol L."

CORTECON: A Temporal Transcriptome Analysis of In Vitro Human Cerebral Cortex Development from Human Embryonic Stem Cells by van de Leemput, Joyce, Boles, Nathan C., Kiehl, Thomas R., Corneo, Barbara, Lederman, Patty, Menon, Vilas, Lee, Changkyu, Martinez, Refugio A., Levi, Boaz P., Thompson, Carol L., Yao, Shuyuan, Kaykas, Ajamete, Temple, Sally, Fasano, Christopher A.

“…Many neurological and psychiatric disorders affect the cerebral cortex, and a clearer understanding of the molecular processes underlying human corticogenesis…”
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Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system by Sunkin, Susan M, Ng, Lydia, Lau, Chris, Dolbeare, Tim, Gilbert, Terri L, Thompson, Carol L, Hawrylycz, Michael, Dang, Chinh

“…The Allen Brain Atlas (http://www.brain-map.org) provides a unique online public resource integrating extensive gene expression data, connectivity data and…”
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A High-Resolution Spatiotemporal Atlas of Gene Expression of the Developing Mouse Brain by Thompson, Carol L., Ng, Lydia, Menon, Vilas, Martinez, Salvador, Lee, Chang-Kyu, Glattfelder, Katie, Sunkin, Susan M., Henry, Alex, Lau, Christopher, Dang, Chinh, Garcia-Lopez, Raquel, Martinez-Ferre, Almudena, Pombero, Ana, Rubenstein, John L.R., Wakeman, Wayne B., Hohmann, John, Dee, Nick, Sodt, Andrew J., Young, Rob, Smith, Kimberly, Nguyen, Thuc-Nghi, Kidney, Jolene, Kuan, Leonard, Jeromin, Andreas, Kaykas, Ajamete, Miller, Jeremy, Page, Damon, Orta, Geri, Bernard, Amy, Riley, Zackery, Smith, Simon, Wohnoutka, Paul, Hawrylycz, Michael J., Puelles, Luis, Jones, Allan R.

“…To provide a temporal framework for the genoarchitecture of brain development, we generated in situ hybridization data for embryonic and postnatal mouse brain…”
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A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development by Yao, Zizhen, Mich, John K., Ku, Sherman, Menon, Vilas, Krostag, Anne-Rachel, Martinez, Refugio A., Furchtgott, Leon, Mulholland, Heather, Bort, Susan, Fuqua, Margaret A., Gregor, Ben W., Hodge, Rebecca D., Jayabalu, Anu, May, Ryan C., Melton, Samuel, Nelson, Angelique M., Ngo, N. Kiet, Shapovalova, Nadiya V., Shehata, Soraya I., Smith, Michael W., Tait, Leah J., Thompson, Carol L., Thomsen, Elliot R., Ye, Chaoyang, Glass, Ian A., Kaykas, Ajamete, Yao, Shuyuan, Phillips, John W., Grimley, Joshua S., Levi, Boaz P., Wang, Yanling, Ramanathan, Sharad

“…During human brain development, multiple signaling pathways generate diverse cell types with varied regional identities. Here, we integrate single-cell RNA…”
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Sleep Deprivation Effects on Circadian Clock Gene Expression in the Cerebral Cortex Parallel Electroencephalographic Differences among Mouse Strains by Wisor, Jonathan P, Pasumarthi, Ravi K, Gerashchenko, Dmitry, Thompson, Carol L, Pathak, Sayan, Sancar, Aziz, Franken, Paul, Lein, Ed S, Kilduff, Thomas S

“…Sleep deprivation (SD) results in increased electroencephalographic (EEG) delta power during subsequent non-rapid eye movement sleep (NREMS) and is associated…”
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Cell-type-specific consequences of reelin deficiency in the mouse neocortex, hippocampus, and amygdala by Boyle, Maureen P., Bernard, Amy, Thompson, Carol L., Ng, Lydia, Boe, Andrew, Mortrud, Marty, Hawrylycz, Michael J., Jones, Allan R., Hevner, Robert F., Lein, Ed S.

“…The disrupted cortical lamination phenotype in reeler mice and subsequent identification of the Reelin signaling pathway have strongly informed models of…”
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Posttranslational Regulation of the Mammalian Circadian Clock by Cryptochrome and Protein Phosphatase 5 by Partch, Carrie L., Shields, Katherine F., Thompson, Carol L., Selby, Christopher P., Sancar, Aziz

“…The molecular oscillator that drives circadian rhythmicity in mammals obtains its near 24-h periodicity from posttranslational regulation of clock proteins…”
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Molecular and anatomical signatures of sleep deprivation in the mouse brain by Thompson, Carol L, Wisor, Jonathan P, Lee, Chang-Kyu, Pathak, Sayan D, Gerashchenko, Dmitry, Smith, Kimberly A, Fischer, Shanna R, Kuan, Chihchau L, Sunkin, Susan M, Ng, Lydia L, Lau, Christopher, Hawrylycz, Michael, Jones, Allan R, Kilduff, Thomas S, Lein, Edward S

“…Sleep deprivation (SD) leads to a suite of cognitive and behavioral impairments, and yet the molecular consequences of SD in the brain are poorly understood…”
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Photolyase/cryptochrome blue-light photoreceptors use photon energy to repair DNA and reset the circadian clock by Thompson, Carol L, Sancar, Aziz

“…Blue light governs a number of cellular responses in bacteria, plants, and animals, including photoreactivation, plant development, and circadian…”
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Light Induction of a Vertebrate Clock Gene Involves Signaling through Blue-Light Receptors and MAP Kinases by Cermakian, Nicolas, Pando, Matthew P, Thompson, Carol L, Pinchak, Anna B, Selby, Christopher P, Gutierrez, Laura, Wells, Dan E, Cahill, Gregory M, Sancar, Aziz, Sassone-Corsi, Paolo

“…The signaling pathways that couple light photoreception to entrainment of the circadian clock have yet to be deciphered. Two prominent groups of candidates for…”
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Transcriptional network orchestrating regional patterning of cortical progenitors by Ypsilanti, Athena R., Pattabiraman, Kartik, Catta-Preta, Rinaldo, Golonzhka, Olga, Lindtner, Susan, Tang, Ke, Jones, Ian R., Abnousi, Armen, Juric, Ivan, Hu, Ming, Shen, Yin, Dickel, Diane E., Visel, Axel, Pennacchio, Len A., Hawrylycz, Michael, Thompson, Carol L., Zeng, Hongkui, Barozzi, Iros, Nord, Alex S., Rubenstein, John L.

“…We uncovered a transcription factor (TF) network that regulates cortical regional patterning in radial glial stem cells. Screening the expression of hundreds…”
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Expression of the Blue-Light Receptor Cryptochrome in the Human Retina by Thompson, Carol L, Rickman, Catherine Bowes, Shaw, Steven J, Ebright, Jessica N, Kelly, Una, Sancar, Aziz, Rickman, Dennis W

“…To analyze the patterns of expression of the cryptochromes, CRY1 and CRY2, in the human retina and to correlate expression of these putative blue-light…”
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Genomic Anatomy of the Hippocampus by Thompson, Carol L., Pathak, Sayan D., Jeromin, Andreas, Ng, Lydia L., MacPherson, Cameron R., Mortrud, Marty T., Cusick, Allison, Riley, Zackery L., Sunkin, Susan M., Bernard, Amy, Puchalski, Ralph B., Gage, Fred H., Jones, Allan R., Bajic, Vladimir B., Hawrylycz, Michael J., Lein, Ed S.

“…Availability of genome-scale in situ hybridization data allows systematic analysis of genetic neuroanatomical architecture. Within the hippocampus,…”
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Society of Critical Care Medicine Presidential Address–42nd Annual Congress, January 2013, San Juan, Puerto Rico by Thompson, Carol L

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Aberrant Cortical Activity in Multiple GCaMP6-Expressing Transgenic Mouse Lines by Steinmetz, Nicholas A, Buetfering, Christina, Lecoq, Jerome, Lee, Christian R, Peters, Andrew J, Jacobs, Elina A K, Coen, Philip, Ollerenshaw, Douglas R, Valley, Matthew T, de Vries, Saskia E J, Garrett, Marina, Zhuang, Jun, Groblewski, Peter A, Manavi, Sahar, Miles, Jesse, White, Casey, Lee, Eric, Griffin, Fiona, Larkin, Joshua D, Roll, Kate, Cross, Sissy, Nguyen, Thuyanh V, Larsen, Rachael, Pendergraft, Julie, Daigle, Tanya, Tasic, Bosiljka, Thompson, Carol L, Waters, Jack, Olsen, Shawn, Margolis, David J, Zeng, Hongkui, Hausser, Michael, Carandini, Matteo, Harris, Kenneth D

“…Transgenic mouse lines are invaluable tools for neuroscience but, as with any technique, care must be taken to ensure that the tool itself does not unduly…”
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Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation by Close, Jennie L., Yao, Zizhen, Levi, Boaz P., Miller, Jeremy A., Bakken, Trygve E., Menon, Vilas, Ting, Jonathan T., Wall, Abigail, Krostag, Anne-Rachel, Thomsen, Elliot R., Nelson, Angel M., Mich, John K., Hodge, Rebecca D., Shehata, Soraya I., Glass, Ian A., Bort, Susan, Shapovalova, Nadiya V., Ngo, N. Kiet, Grimley, Joshua S., Phillips, John W., Thompson, Carol L., Ramanathan, Sharad, Lein, Ed

“…GABAergic interneurons are essential for neural circuit function, and their loss or dysfunction is implicated in human neuropsychiatric disease. In vitro…”
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Preservation of Light Signaling to the Suprachiasmatic Nucleus in Vitamin A-Deficient Mice by Thompson, Carol L., Blaner, William S., Van Gelder, Russell N., Lai, Katherine, Quadro, Loredana, Colantuoni, Vittorio, Gottesman, Max E., Sancar, Aziz

“…To investigate the role of retinal-based pigments (opsins) in circadian photoreception in mice, animals mutated in plasma retinol binding protein were placed…”
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Pain behaviors observed during six common procedures: Results from Thunder Project II by Puntillo, Kathleen A, Morris, Ann B, Thompson, Carol L, Stanik-Hutt, Julie, White, Cheri A, Wild, Lorie R

“…OBJECTIVEPatients frequently display behaviors during procedures that may be pain related. Clinicians often rely on the patient’s demonstration of behaviors as…”
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Single-Cell Profiling of an In Vitro Model of Human Interneuron Development Reveals Temporal Dynamics of Cell Type Production and Maturation by Close, Jennie L., Yao, Zizhen, Levi, Boaz P., Miller, Jeremy A., Bakken, Trygve E., Menon, Vilas, Ting, Jonathan T., Wall, Abigail, Krostag, Anne-Rachel, Thomsen, Elliot R., Nelson, Angel M., Mich, John K., Hodge, Rebecca D., Shehata, Soraya I., Glass, Ian A., Bort, Susan, Shapovalova, Nadiya V., Ngo, N. Kiet, Grimley, Joshua S., Phillips, John W., Thompson, Carol L., Ramanathan, Sharad, Lein, Ed

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Quantitative methods for genome-scale analysis of in situ hybridization and correlation with microarray data by Lee, Chang-Kyu, Sunkin, Susan M, Kuan, Chihchau, Thompson, Carol L, Pathak, Sayan, Ng, Lydia, Lau, Chris, Fischer, Shanna, Mortrud, Marty, Slaughterbeck, Cliff, Jones, Allan, Lein, Ed, Hawrylycz, Michael

“…With the emergence of genome-wide colorimetric in situ hybridization (ISH) data sets such as the Allen Brain Atlas, it is important to understand the…”
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