Search Results - "Thapa, Ishwor"

FunSet: an open-source software and web server for performing and displaying Gene Ontology enrichment analysis by Hale, Matthew L, Thapa, Ishwor, Ghersi, Dario

“…Gene Ontology enrichment analysis provides an effective way to extract meaningful information from complex biological datasets. By identifying terms that are…”
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Multiplatform biomarker identification using a data-driven approach enables single-sample classification by Zhang, Ling, Thapa, Ishwor, Haas, Christian, Bastola, Dhundy

“…High-throughput gene expression profiles have allowed discovery of potential biomarkers enabling early diagnosis, prognosis and developing individualized…”
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A novel graph theoretical approach for modeling microbiomes and inferring microbial ecological relationships by Kim, Suyeon, Thapa, Ishwor, Zhang, Ling, Ali, Hesham

“…Microbiomes play vital roles in shaping environments and stabilize them based on their compositions and inter-species relationships among its species…”
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Modeling preferential attraction to infected hosts in vector-borne diseases by Thapa, Ishwor, Ghersi, Dario

“…Vector-borne infectious diseases cause more than 700,000 deaths a year and represent an increasing threat to public health worldwide. Strategies to mitigate…”
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Enhancing high-performance concrete properties through partial replacement of fine aggregate with crusher run dust: A comprehensive experimental investigation by Thapa, Ishwor, Baral, Nirmal Prasad, Adhikari, Krishna Raj

“…Crusher run dust is a waste product produced in significant quantities during the removal and processing of rocks at crusher plants. This experiment examines…”
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Comprehensive review of LCA studies in Civil Engineering by Thapa, Ishwor, Baral, Nirmal Prasad, Adhikari, Krishna Raj

“…This review paper explores the application of Life Cycle Assessment (LCA) within the domain of civil engineering, aiming to provide a comprehensive overview of…”
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A Computational Approach to Demonstrate the Control of Gene Expression via Chromosomal Access in Colorectal Cancer by Pecka, Caleb J., Thapa, Ishwor, Singh, Amar B., Bastola, Dhundy

“…Background: Improved technologies for chromatin accessibility sequencing such as ATAC-seq have increased our understanding of gene regulation mechanisms,…”
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Cross-reactivity influences changes in human influenza A virus and Epstein Barr virus specific CD8 memory T cell receptor alpha and beta repertoires between young and old by Clark, Fransenio, Gil, Anna, Thapa, Ishwor, Aslan, Nuray, Ghersi, Dario, Selin, Liisa K

“…Older people have difficulty controlling infection with common viruses such as influenza A virus (IAV), RNA virus which causes recurrent infections due to a…”
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Morpho-physiological and biochemical response of rice (Oryza sativa L.) to drought stress: A review by Bhandari, Utsav, Gajurel, Aakriti, Khadka, Bharat, Thapa, Ishwor, Chand, Isha, Bhatta, Dibya, Poudel, Anju, Pandey, Meena, Shrestha, Suraj, Shrestha, Jiban

“…Global food shortages are caused mainly by drought, the primary driver of yield loss in agriculture worldwide. Drought stress negatively impacts the…”
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Loss of claudin-3 expression increases colitis risk by promoting Gut Dysbiosis by Ahmad, Rizwan, Kumar, Balawant, Thapa, Ishwor, Talmon, Geoffrey A., Salomon, Jeffrey, Ramer-Tait, Amanda E., Bastola, Dhundy K., Dhawan, Punita, Singh, Amar B.

“…Dysregulation of both the gut barrier and microbiota (dysbiosis) promotes susceptibility to and severity of Inflammatory Bowel Diseases (IBD). Leaky gut and…”
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Bacteria commonly associated with central nervous system catheter infections elicit distinct CSF proteome signatures by Beaver, Matthew, Noe, Dragana, Thapa, Ishwor, Ali, Hesham, Snowden, Jessica, Kielian, Tammy, Skar, Gwenn L

“…Cerebrospinal fluid (CSF) shunt infection is a common and devastating complication of the treatment of hydrocephalus. Timely and accurate diagnosis is…”
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KPC-4 Is Encoded within a Truncated Tn4401 in an IncL/M Plasmid, pNE1280, Isolated from Enterobacter cloacae and Serratia marcescens by BRYANT, Kendall A, VAN SCHOONEVELD, Trevor C, THAPA, Ishwor, BASTOLA, Dhundy, WILLIAMS, Laurina O, SAFRANEK, Thomas J, HINRICHS, Steven H, RUPP, Mark E, FEYA, Paul D

“…Classifications Services AAC Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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MiR-212-3p functions as a tumor suppressor gene in group 3 medulloblastoma via targeting nuclear factor I/B (NFIB) by Perumal, Naveenkumar, Kanchan, Ranjana K, Doss, David, Bastola, Noah, Atri, Pranita, Chirravuri-Venkata, Ramakanth, Thapa, Ishwor, Vengoji, Raghupathy, Maurya, Shailendra K, Klinkebiel, David, Talmon, Geoffrey A, Nasser, Mohd W, Batra, Surinder K, Mahapatra, Sidharth

“…Haploinsufficiency of chromosome 17p and c-Myc amplification distinguish group 3 medulloblastomas which are associated with early metastasis, rapid recurrence,…”
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Pyrroline-5-Carboxylate Reductase-2 Promotes Colorectal Carcinogenesis by Modulating Microtubule-Associated Serine/Threonine Kinase-like/Wnt/β-Catenin Signaling by Lama Tamang, Raju, Kumar, Balawant, Patel, Sagar M, Thapa, Ishwor, Ahmad, Alshomrani, Kumar, Vikas, Ahmad, Rizwan, Becker, Donald F, Bastola, Dundy Kiran, Dhawan, Punita, Singh, Amar B

“…Despite significant progress in clinical management, colorectal cancer (CRC) remains the third most common cause of cancer-related deaths. A positive…”
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A Claudin-Based Molecular Signature Identifies High-Risk, Chemoresistant Colorectal Cancer Patients by Gowrikumar, Saiprasad, Primeaux, Mark, Pravoverov, Kristina, Wu, Chao, Szeglin, Bryan C., Sauvé, Charles-Etienne Gabriel, Thapa, Ishwor, Bastola, Dhundy, Chen, Xi Steven, Smith, J. Joshua, Singh, Amar B., Dhawan, Punita

“…Identifying molecular characteristics that are associated with aggressive cancer phenotypes through gene expression profiling can help predict treatment…”
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Bio-logic builder: a non-technical tool for building dynamical, qualitative models by Helikar, Tomáš, Kowal, Bryan, Madrahimov, Alex, Shrestha, Manish, Pedersen, Jay, Limbu, Kahani, Thapa, Ishwor, Rowley, Thaine, Satalkar, Rahul, Kochi, Naomi, Konvalina, John, Rogers, Jim A

“…Computational modeling of biological processes is a promising tool in biomedical research. While a large part of its potential lies in the ability to integrate…”
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Experimental and Reliability Study of Nano-Silica Stabilized Problematic Soil in Lesser Himalayan Region by Thapa, Ishwor, Ghani, Sufyan

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Advancing earth science in geotechnical engineering: A data-driven soft computing technique for unconfined compressive strength prediction in soft soil by Thapa, Ishwor, Ghani, Sufyan

“…This study presents a pioneering approach that combines artificial intelligence and a nature-inspired optimization algorithm to predict soil unconfined…”
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Estimation of California bearing ratio for hill highways using advanced hybrid artificial neural network algorithms by Thapa, Ishwor, Ghani, Sufyan

“…California bearing ratio (CBR) is one of the important parameters that is used to express the strength of the pavement subgrade of railways, roadways, and…”
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Applying Optimized Machine Learning Models for Predicting Unconfined Compressive Strength in Fine-Grained Soil by Thapa, Ishwor, Ghani, Sufyan

“…This research investigates the potential of optimized machine learning (OML) models for the prediction of UCS in fine-grained soil. Leveraging OML models, the…”
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