Search Results - "Tesson, Bruno M"

DiffCoEx: a simple and sensitive method to find differentially coexpressed gene modules by Tesson, Bruno M, Breitling, Rainer, Jansen, Ritsert C

“…Large microarray datasets have enabled gene regulation to be studied through coexpression analysis. While numerous methods have been developed for identifying…”
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Genetical genomics: spotlight on QTL hotspots by Breitling, Rainer, Li, Yang, Tesson, Bruno M, Fu, Jingyuan, Wu, Chunlei, Wiltshire, Tim, Gerrits, Alice, Bystrykh, Leonid V, de Haan, Gerald, Su, Andrew I, Jansen, Ritsert C

“…  [...]a key consideration in eQTL analysis is in the effective design of a permutation strategy to assess statistical significance. [...]the number of…”
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Expression quantitative trait loci are highly sensitive to cellular differentiation state by Gerrits, Alice, Li, Yang, Tesson, Bruno M, Bystrykh, Leonid V, Weersing, Ellen, Ausema, Albertina, Dontje, Bert, Wang, Xusheng, Breitling, Rainer, Jansen, Ritsert C, de Haan, Gerald

“…Genetical genomics is a strategy for mapping gene expression variation to expression quantitative trait loci (eQTLs). We performed a genetical genomics…”
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Undifferentiated Embryonic Cell Transcription Factor 1 Regulates ESC Chromatin Organization and Gene Expression by Kooistra, Susanne M., van den Boom, Vincent, Thummer, Rajkumar P., Johannes, Frank, Wardenaar, René, Tesson, Bruno M., Veenhoff, Liesbeth M., Fusetti, Fabrizia, O'Neill, Laura P., Turner, Bryan M., de Haan, Gerald, Eggen, Bart J. L.

“…Previous reports showed that embryonic stem (ES) cells contain hyperdynamic and globally transcribed chromatin—properties that are important for ES cell…”
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Critical reasoning on causal inference in genome-wide linkage and association studies by Li, Yang, Tesson, Bruno M, Churchill, Gary A, Jansen, Ritsert C

“…Genome-wide linkage and association studies of tens of thousands of clinical and molecular traits are currently underway, offering rich data for inferring…”
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Defining gene and QTL networks by Jansen, Ritsert C, Tesson, Bruno M, Fu, Jingyuan, Yang, Yajie, McIntyre, Lauren M

“…Current technologies for high-throughput molecular profiling of large numbers of genetically different individuals offer great potential for elucidating the…”
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XGAP: a uniform and extensible data model and software platform for genotype and phenotype experiments by Swertz, Morris A, Velde, K Joeri van der, Tesson, Bruno M, Scheltema, Richard A, Arends, Danny, Vera, Gonzalo, Alberts, Rudi, Dijkstra, Martijn, Schofield, Paul, Schughart, Klaus, Hancock, John M, Smedley, Damian, Wolstencroft, Katy, Goble, Carole, de Brock, Engbert O, Jones, Andrew R, Parkinson, Helen E, Jansen, Ritsert C

“…We present an extensible software model for the genotype and phenotype community, XGAP. Readers can download a standard XGAP (http://www.xgap.org) or…”
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eQTL analysis in mice and rats by Tesson, Bruno M, Jansen, Ritsert C

“…Since the introduction of genetical genomics in 2001, many studies have been published on various organisms, including mouse and rat. Genetical genomics makes…”
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Abstract 5130: Integrative approaches for the identification of therapeutic targets in basal like breast cancer from multi-level molecular data by Tesson, Bruno M., Rigaill, Guillem, Vincent-Salomon, Anne, Gentien, David, Roman-Roman, Sergio, Pierré, Alain, Cruzalegui, Francisco, Depil, Stéphane, Tucker, Gordon, Dubois, Thierry, Barillot, Emmanuel

“…Abstract Basal-like breast cancer is a molecular subtype of breast carcinoma accounting for up to 15% of cases and associated with a poor prognosis. There is…”
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Defining gene and QTL networks: Genome studies and molecular genetics by JANSEN, Ritsert C, TESSON, Bruno M, JINGYUAN FU, YAJIE YANG, MCLNTYRE, Lauren M

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Expression Quantitative Trait Loci Are Highly Sensitive to Cellular Differentiation State: e1000692 by Gerrits, Alice, Li, Yang, Tesson, Bruno M, Bystrykh, Leonid V, Weersing, Ellen, Ausema, Albertina, Dontje, Bert, Wang, Xusheng, Breitling, Rainer, Jansen, Ritsert C, Haan, Gerald de

“…Genetical genomics is a strategy for mapping gene expression variation to expression quantitative trait loci (eQTLs). We performed a genetical genomics…”
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Genetical Genomics: Spotlight on QTL Hotspots: e1000232 by Breitling, Rainer, Li, Yang, Tesson, Bruno M, Fu, Jingyuan, Wu, Chunlei, Wiltshire, Tim, Gerrits, Alice, Bystrykh, Leonid V, Haan, Gerald de, Su, Andrew I, Jansen, Ritsert C

“…[...]a key consideration in eQTL analysis is in the effective design of a permutation strategy to assess statistical significance. [...]the number of…”
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