Search Results - "Tavazoie, S."

S19 Regulation of breast cancer metastasis by endogenous human microRNAs by Tavazoie, S

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CREB: A Major Mediator of Neuronal Neurotrophin Responses by Finkbeiner, Steven, Tavazoie, Sohail F, Maloratsky, Anna, Jacobs, Kori M, Harris, Kristen M, Greenberg, Michael E

“…Neurotrophins regulate neuronal survival, differentiation, and synaptic function. To understand how neurotrophins elicit such diverse responses, we elucidated…”
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Diverse receptive fields in the lateral geniculate nucleus during thalamocortical development by Clay Reid, R, Tavazoie, Sohail F

“…Most models of thalamocortical development in the visual system assume a homogeneous population of thalamic inputs to the cortex, each with concentric on- or…”
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Predicting Gene Expression from Sequence by Beer, Michael A., Tavazoie, Saeed

“…We describe a systematic genome-wide approach for learning the complex combinatorial code underlying gene expression. Our probabilistic approach identifies…”
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Mapping Global Histone Acetylation Patterns to Gene Expression by Kurdistani, Siavash K, Tavazoie, Saeed, Grunstein, Michael

“…Histone acetyltransferases and deacetylases with specificities for different sites of acetylation affect common chromatin regions. This could generate unique…”
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P-125 Phase 1b study of RGX-202-01, a first-in-class oral inhibitor of the SLC6A8/CKB pathway, in combination with FOLFIRI and bevacizumab (BEV) in second-line advanced colorectal cancer (CRC) by Hendifar, A., Rosen, L., McRee, A., Cercek, A., Basu-Mallick, A., Spigel, D., Tavazoie, S., Rowinsky, E., Szarek, M., Gonsalves, F., Kurth, I., Andreu, C., Busby, R., Spector, S., Darst, D., Lebaka, N., Bechar, N., Tavazoie, M., Wasserman, R., Fakih, M.

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Coexistence of Widespread Clones and Large Radial Clones in Early Embryonic Ferret Cortex by Ware, Marcus L., Tavazoie, Sohail F., Reid, Christopher B., Walsh, Christopher A.

“…Cell lineage analysis in rodents has shown that the cerebral cortex is formed from both widespread and large radial clustered clones representing partly…”
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Clonal dispersion and evidence for asymmetric cell division in ferret cortex by Reid, C B, Tavazoie, S F, Walsh, C A

“…Cell lineage analysis with retroviral libraries suggests that clonal progeny disperse widely in rodent cortex. To determine whether widespread dispersion is a…”
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Differential block of nicotinic synapses on B versus C neurones in sympathetic ganglia of frog by α‐conotoxins MII and ImI by Tavazoie, Sohail F, Tavazoie, Masoud F, McIntosh, J Michael, Olivera, Baldomero M, Yoshikami, Doju

“…The effects of two new acetylcholine receptor antagonists, α‐conotoxin MII and α‐conotoxin ImI, on nicotinic synaptic transmission in the 10th paravertebral…”
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Computational identification of Cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae by Hughes, J.D, Estep, P.W, Tavazoie, S, Church, G.M

“…AlignACE is a Gibbs sampling algorithm for identifying motifs that are over-represented in a set of DNA sequences. When used to search upstream of apparently…”
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The Rac1-GEF Tiam1 Couples the NMDA Receptor to the Activity-Dependent Development of Dendritic Arbors and Spines by Tolias, Kimberley F., Bikoff, Jay B., Burette, Alain, Paradis, Suzanne, Harrar, Dana, Tavazoie, Sohail, Weinberg, Richard J., Greenberg, Michael E.

“…NMDA-type glutamate receptors play a critical role in the activity-dependent development and structural remodeling of dendritic arbors and spines. However, the…”
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Systematic determination of genetic network architecture by Church, George M, Tavazoie, Saeed, Hughes, Jason D, Campbell, Michael J, Cho, Raymond J

“…Technologies to measure whole-genome mRNA abundances and methods to organize and display such data are emerging as valuable tools for systems-level exploration…”
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Whole-genome discovery of transcription factor binding sites by network-level conservation by Pritsker, Moshe, Liu, Yir-Chung, Beer, Michael A, Tavazoie, Saeed

“…Comprehensive identification of DNA cis-regulatory elements is crucial for a predictive understanding of transcriptional network dynamics. Strong evidence…”
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Ras and Gpa2 mediate one branch of a redundant glucose signaling pathway in yeast by Wang, Ying, Pierce, Michael, Schneper, Lisa, Güldal, C Gökçe, Zhang, Xiuying, Tavazoie, Saeed, Broach, James R

“…Addition of glucose to starved yeast cells elicits a dramatic restructuring of the transcriptional and metabolic state of the cell. While many components of…”
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Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach by Elemento, Olivier, Tavazoie, Saeed

“…We describe a powerful new approach for discovering globally conserved regulatory elements between two genomes. The method is fast, simple and comprehensive,…”
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A cross-genomic approach for systematic mapping of phenotypic traits to genes by Jim, Kam, Parmar, Kush, Singh, Mona, Tavazoie, Saeed

“…We present a computational method for de novo identification of gene function using only cross-organismal distribution of phenotypic traits. Our approach…”
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Selection analyses of insertional mutants using subgenic-resolution arrays by Church, George M, Badarinarayana, Vasudeo, Estep, Preston W, Shendure, Jay, Edwards, Jeremy, Tavazoie, Saeed, Lam, Felix

“…We describe a method of genome-wide analysis of quantitative growth phenotypes using insertional mutagenesis and DNA microarrays. We applied the method to…”
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Genome-wide binding map of the histone deacetylase Rpd3 in yeast by Grunstein, Michael, Kurdistani, Siavash K, Robyr, Daniel, Tavazoie, Saeed

“…We describe the genome-wide distribution of the histone deacetylase and repressor Rpd3 and its associated proteins Ume1 and Ume6 in Saccharomyces cerevisiae…”
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Regulation of neuronal morphology and function by the tumor suppressors Tsc1 and Tsc2 by Sabatini, Bernardo L, Tavazoie, Sohail F, Alvarez, Veronica A, Ridenour, Dennis A, Kwiatkowski, David J

“…Mutations in the TSC1 or TSC2 tumor suppressor genes lead to tuberous sclerosis complex (TSC), a dominant hamartomatous disorder that often presents with…”
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Quantitative whole-genome analysis of DNA-protein interactions by in vivo methylase protection in E. coli by Tavazoie, Saeed, Church, George M

“…A global methylation-based technique was used to identify, display, and quantitate the in vivo occupancy of numerous protein-binding sites within the…”
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