Search Results - "Tanz, Sandra"

SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations by Hooper, Cornelia M, Castleden, Ian R, Tanz, Sandra K, Aryamanesh, Nader, Millar, A Harvey

“…The SUBcellular location database for Arabidopsis proteins (SUBA4, http://suba.live) is a comprehensive collection of manually curated published data sets of…”
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SUBA3: a database for integrating experimentation and prediction to define the SUBcellular location of proteins in Arabidopsis by Tanz, Sandra K, Castleden, Ian, Hooper, Cornelia M, Vacher, Michael, Small, Ian, Millar, Harvey A

“…The subcellular location database for Arabidopsis proteins (SUBA3, http://suba.plantenergy.uwa.edu.au) combines manual literature curation of large-scale…”
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SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome by Hooper, Cornelia M, Tanz, Sandra K, Castleden, Ian R, Vacher, Michael A, Small, Ian D, Millar, A Harvey

“…Knowing the subcellular location of proteins is critical for understanding their function and developing accurate networks representing eukaryotic biological…”
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Remodeled Respiration in ndufs4 with Low Phosphorylation Efficiency Suppresses Arabidopsis Germination and Growth and Alters Control of Metabolism at Night by Meyer, Etienne H, Tomaz, Tiago, Carroll, Adam J, Estavillo, Gonzalo, Delannoy, Etienne, Tanz, Sandra K, Small, Ian D, Pogson, Barry J, Millar, A. Harvey

“…Respiratory oxidative phosphorylation is a cornerstone of cellular metabolism in aerobic multicellular organisms. The efficiency of this process is generally…”
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AEF1/MPR25 is implicated in RNA editing of plastid atpF and mitochondrial nad5, and also promotes atpF splicing in Arabidopsis and rice by Yap, Aaron, Kindgren, Peter, Colas des Francs‐Small, Catherine, Kazama, Tomohiko, Tanz, Sandra K., Toriyama, Kinya, Small, Ian

“…Summary RNA editing is an essential mechanism that modifies target cytidines to uridine in both mitochondrial and plastid mRNA. Target sites are recognized by…”
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The Pentatricopeptide Repeat Proteins TANG2 and ORGANELLE TRANSCRIPT PROCESSING439 Are Involved in the Splicing of the Multipartite nad5 Transcript Encoding a Subunit of Mitochondrial Complex I by des Francs-Small, Catherine Colas, de Longevialle, Andéol Falcon, Li, Yunhai, Lowe, Elizabeth, Tanz, Sandra K., Smith, Caroline, Bevan, Michael W., Small, Ian

“…Pentatricopeptide repeat proteins constitute a large family of RNA-binding proteins in higher plants (around 450 genes in Arabidopsis [Arabidopsis thaliana]),…”
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Establishment of Photosynthesis through Chloroplast Development Is Controlled by Two Distinct Regulatory Phases by Dubreuil, Carole, Jin, Xu, de Dios Barajas-López, Juan, Hewitt, Timothy C., Tanz, Sandra K., Dobrenel, Thomas, Schröder, Wolfgang P., Hanson, Johannes, Pesquet, Edouard, Grönlund, Andreas, Small, Ian, Strand, Åsa

“…Chloroplasts develop from undifferentiated proplastids present in meristematic tissue. Thus, chloroplast biogenesis is closely connected to leaf development,…”
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A MEM1-like motif directs mesophyll cell-specific expression of the gene encoding the C₄ carbonic anhydrase in Flaveria by Gowik, Udo, Schulze, Stefanie, Saladié, Montserrat, Rolland, Vivien, Tanz, Sandra K., Westhoff, Peter, Ludwig, Martha

“…The first two reactions of C₄ photosynthesis are catalysed by carbonic anhydrase (CA) and phosphoenolpyruvate carboxylase (PEPC) in the leaf mesophyll (M) cell…”
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Study of New Arabidopsis Chloroplast RNA Editing Mutants Reveals General Features of Editing Factors and Their Target Sites by Hammani, Kamel, Okuda, Kenji, Tanz, Sandra K, Chateigner-Boutin, Anne-Laure, Shikanai, Toshiharu, Small, Ian

“…RNA editing in higher plant organelles results in the conversion of specific cytidine residues to uridine residues in RNA. The recognition of a specific target…”
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OTP70 is a pentatricopeptide repeat protein of the E subgroup involved in splicing of the plastid transcript rpoC1 by Chateigner-Boutin, Anne-Laure, des Francs-Small, Catherine Colas, Delannoy, Etienne, Kahlau, Sabine, Tanz, Sandra K, de Longevialle, Andéol Falcon, Fujii, Sota, Small, Ian

“…Over 20 proteins of the pentatricopeptide repeat (PPR) family have been demonstrated to be involved in RNA editing in plant mitochondria and chloroplasts. All…”
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The Pentatricopeptide Repeat Protein OTP87 Is Essential for RNA Editing of nad7 and atp1 Transcripts in Arabidopsis Mitochondria by Hammani, Kamel, Colas des Francs-Small, Catherine, Takenaka, Mizuki, Tanz, Sandra K., Okuda, Kenji, Shikanai, Toshiharu, Brennicke, Axel, Small, Ian

“…In plant organelles, RNA editing is a post-transcriptional mechanism that converts specific cytidines to uridines in RNA of both mitochondria and plastids,…”
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Insights into the Composition and Assembly of the Membrane Arm of Plant Complex I through Analysis of Subcomplexes in Arabidopsis Mutant Lines by Meyer, Etienne H., Solheim, Cory, Tanz, Sandra K., Bonnard, Géraldine, Millar, A. Harvey

“…NADH-ubiquinone oxidoreductase (Complex I, EC 1.6.5.3) is the largest complex of the mitochondrial respiratory chain. In eukaryotes, it is composed of more…”
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Fluorescent protein tagging as a tool to define the subcellular distribution of proteins in plants by Tanz, Sandra K, Castleden, Ian, Small, Ian D, Millar, A Harvey

“…Fluorescent protein (FP) tagging approaches are widely used to determine the subcellular location of plant proteins. Here we give a brief overview of FP…”
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The E domains of pentatricopeptide repeat proteins from different organelles are not functionally equivalent for RNA editing by Chateigner‐Boutin, Anne‐Laure, Colas des Francs‐Small, Catherine, Fujii, Sota, Okuda, Kenji, Tanz, Sandra K., Small, Ian

“…Summary RNA editing in plants is an essential post‐transcriptional process that modifies the genetic information encoded in organelle genomes. Forward and…”
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pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts by Okuda, Kenji, Hammani, Kamel, Tanz, Sandra K, Peng, Lianwei, Fukao, Yoichiro, Myouga, Fumiyoshi, Motohashi, Reiko, Shinozaki, Kazuo, Small, Ian, Shikanai, Toshiharu

“…Several hundred nucleus-encoded factors are required for regulating gene expression in plant organelles. Among them, the most numerous are the members of the…”
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The SCO2 protein disulphide isomerase is required for thylakoid biogenesis and interacts with LCHB1 chlorophyll a/b binding proteins which affects chlorophyll biosynthesis in Arabidopsis seedlings by Tanz, Sandra K., Kilian, Joachim, Johnsson, Christoffer, Apel, Klaus, Small, Ian, Harter, Klaus, Wanke, Dierk, Pogson, Barry, Albrecht, Verónica

“…Summary The process of chloroplast biogenesis requires a multitude of pathways and processes to establish chloroplast function. In cotyledons of seedlings,…”
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Subcellular Proteomics as a Unified Approach of Experimental Localizations and Computed Prediction Data for Arabidopsis and Crop Plants by Hooper, Cornelia M, Castleden, Ian R, Tanz, Sandra K, Grasso, Sally V, Millar, A Harvey

“…In eukaryotic organisms, subcellular protein location is critical in defining protein function and understanding sub-functionalization of gene families. Some…”
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Identification of a Pentatricopeptide Repeat Protein Implicated in Splicing of Intron 1 of Mitochondrial nad7 Transcripts by Koprivova, Anna, des Francs-Small, Catherine Colas, Calder, Grant, Mugford, Sam T., Tanz, Sandra, Lee (이복 례), Bok-Rye, Zechmann, Bernd, Small, Ian, Kopriva, Stanislav

“…Splicing of plant organellar transcripts is facilitated by members of a large protein family, the pentatricopeptide repeat proteins. We have identified a…”
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MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data by Joshi, Hiren J, Hirsch-Hoffmann, Matthias, Baerenfaller, Katja, Gruissem, Wilhelm, Baginsky, Sacha, Schmidt, Robert, Schulze, Waltraud X, Sun, Qi, van Wijk, Klaas J, Egelhofer, Volker, Wienkoop, Stefanie, Weckwerth, Wolfram, Bruley, Christophe, Rolland, Norbert, Toyoda, Tetsuro, Nakagami, Hirofumi, Jones, Alexandra M, Briggs, Steven P, Castleden, Ian, Tanz, Sandra K, Millar, A. Harvey, Heazlewood, Joshua L

“…Proteomics has become a critical tool in the functional understanding of plant processes at the molecular level. Proteomics-based studies have also contributed…”
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Protocol: a fast and simple in situ PCR method for localising gene expression in plant tissue by Athman, Asmini, Tanz, Sandra K, Conn, Vanessa M, Jordans, Charlotte, Mayo, Gwenda M, Ng, Weng W, Burton, Rachel A, Conn, Simon J, Gilliham, Matthew

“…BACKGROUND: An important step in characterising the function of a gene is identifying the cells in which it is expressed. Traditional methods to determine this…”
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