Search Results - "Tang, Yinjie J"

Mining microbial metabolism by Tang, Yinjie J., Moon, Tae Seok

“…Comamonas testosteroni utilizes aromatic compounds such as monomers from lignin and plastics, but the underlying metabolic pathways were elusive. Multi-omics…”
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Engineering microbial consortia by division of labor by Roell, Garrett W, Zha, Jian, Carr, Rhiannon R, Koffas, Mattheos A, Fong, Stephen S, Tang, Yinjie J

“…During microbial applications, metabolic burdens can lead to a significant drop in cell performance. Novel synthetic biology tools or multi-step bioprocessing…”
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Machine learning framework for assessment of microbial factory performance by Oyetunde, Tolutola, Liu, Di, Martin, Hector Garcia, Tang, Yinjie J

“…Metabolic models can estimate intrinsic product yields for microbial factories, but such frameworks struggle to predict cell performance (including product…”
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Metabolic Engineering of Synechocystis sp. Strain PCC 6803 for Isobutanol Production by VARMAN, Arul M, YI XIAO, PAKRASI, Himadri B, TANG, Yinjie J

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Photoheterotrophic Fluxome in Synechocystis sp. Strain PCC 6803 and Its Implications for Cyanobacterial Bioenergetics by You, Le, He, Lian, Tang, Yinjie J

“…This study investigated metabolic responses in Synechocystis sp. strain PCC 6803 to photosynthetic impairment. We used 3-(3,4-dichlorophenyl)-1,1-dimethylurea…”
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Engineering the oleaginous yeast Yarrowia lipolytica to produce the aroma compound β-ionone by Czajka, Jeffrey J, Nathenson, Justin A, Benites, Veronica T, Baidoo, Edward E K, Cheng, Qianshun, Wang, Yechun, Tang, Yinjie J

“…β-Ionone is a fragrant terpenoid that generates a pleasant floral scent and is used in diverse applications as a cosmetic and flavoring ingredient. A growing…”
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Decoding how a soil bacterium extracts building blocks and metabolic energy from ligninolysis provides road map for lignin valorization by Varman, Arul M., He, Lian, Follenfant, Rhiannon, Wu, Weihua, Wemmer, Sarah, Wrobel, Steven A., Tang, Yinjie J., Singh, Seema

“…Sphingobium sp. SYK-6 is a soil bacterium boasting a well-studied ligninolytic pathway and the potential for development into a microbial chassis for lignin…”
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Effects of inhibitory compounds in lignocellulosic hydrolysates on Mortierella isabellina growth and carbon utilization by Ruan, Zhenhua, Hollinshead, Whitney, Isaguirre, Christine, Tang, Yinjie J., Liao, Wei, Liu, Yan

“…•M. isabellina can tolerate relatively high concentrations of furfural and HMF.•Acetate in the hydrolysate is a carbon source rather than an inhibitor.•Synergy…”
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Cyanobacterial carbon metabolism: Fluxome plasticity and oxygen dependence by Wan, Ni, DeLorenzo, Drew M., He, Lian, You, Le, Immethun, Cheryl M., Wang, George, Baidoo, Edward E. K., Hollinshead, Whitney, Keasling, Jay D., Moon, Tae Seok, Tang, Yinjie J.

“…ABSTRACT Synechocystis sp. strain PCC 6803 has been widely used as a photo‐biorefinery chassis. Based on its genome annotation, this species contains a…”
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Incomplete Wood–Ljungdahl pathway facilitates one-carbon metabolism in organohalide-respiring Dehalococcoides mccartyi by Zhuang, Wei-Qin, Yi, Shan, Bill, Markus, Brisson, Vanessa L., Feng, Xueyang, Men, Yujie, Conrad, Mark E., Tang, Yinjie J., Alvarez-Cohen, Lisa

“…The acetyl-CoA “Wood–Ljungdahl” pathway couples the folate-mediated one-carbon (C1) metabolism to either CO ₂ reduction or acetate oxidation via acetyl-CoA…”
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Development of Synechocystis sp. PCC 6803 as a phototrophic cell factory by Yu, Yi, You, Le, Liu, Dianyi, Hollinshead, Whitney, Tang, Yinjie J, Zhang, Fuzhong

“…Cyanobacteria (blue-green algae) play profound roles in ecology and biogeochemistry. One model cyanobacterial species is the unicellular cyanobacterium…”
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Photoautotrophic production of D-lactic acid in an engineered cyanobacterium by Varman, Arul M, Yu, Yi, You, Le, Tang, Yinjie J

“…The world faces the challenge to develop sustainable technologies to replace thousands of products that have been generated from fossil fuels. Microbial cell…”
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Rapid Prediction of Bacterial Heterotrophic Fluxomics Using Machine Learning and Constraint Programming by Wu, Stephen Gang, Wang, Yuxuan, Jiang, Wu, Oyetunde, Tolutola, Yao, Ruilian, Zhang, Xuehong, Shimizu, Kazuyuki, Tang, Yinjie J, Bao, Forrest Sheng

“…13C metabolic flux analysis (13C-MFA) has been widely used to measure in vivo enzyme reaction rates (i.e., metabolic flux) in microorganisms. Mining the…”
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Photobiological production of high-value pigments via compartmentalized co-cultures using Ca-alginate hydrogels by Zhao, Runyu, Sengupta, Annesha, Tan, Albern X., Whelan, Ryan, Pinkerton, Taylor, Menasalvas, Javier, Eng, Thomas, Mukhopadhyay, Aindrila, Jun, Young-Shin, Pakrasi, Himadri B., Tang, Yinjie J.

“…Engineered cyanobacterium Synechococcus elongatus can use light and CO 2 to produce sucrose, making it a promising candidate for use in co-cultures with…”
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Deciphering Clostridium metabolism and its responses to bioreactor mass transfer during syngas fermentation by Wan, Ni, Sathish, Ashik, You, Le, Tang, Yinjie J., Wen, Zhiyou

“…This study used 13 C tracers and dynamic labeling to reveal metabolic features (nutrients requirements, pathway delineation and metabolite turnover rates) of…”
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Biofuel production: an odyssey from metabolic engineering to fermentation scale-up by Hollinshead, Whitney, He, Lian, Tang, Yinjie J

“…Metabolic engineering has developed microbial cell factories that can convert renewable carbon sources into biofuels. Current molecular biology tools can…”
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Integrating flux balance analysis into kinetic models to decipher the dynamic metabolism of Shewanella oneidensis MR-1 by Feng, Xueyang, Xu, You, Chen, Yixin, Tang, Yinjie J

“…Shewanella oneidensis MR-1 sequentially utilizes lactate and its waste products (pyruvate and acetate) during batch culture. To decipher MR-1 metabolism, we…”
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Anti-microbial activities of aerosolized transition metal oxide nanoparticles by Wang, Zhipeng, Lee, Yi-Hsuan, Wu, Bing, Horst, Angela, Kang, Yisheng, Tang, Yinjie J., Chen, Da-Ren

“…This study used the electrospray method to create airborne droplets of metal oxide nanoparticles (NPs) and examined their anti-microbial activities, employing…”
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Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications by Tang, Kuo-Hsiang, Tang, Yinjie J, Blankenship, Robert Eugene

“…Photosynthesis is the biological process that converts solar energy to biomass, bio-products, and biofuel. It is the only major natural solar energy storage…”
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Boosting d-lactate production in engineered cyanobacteria using sterilized anaerobic digestion effluents by Hollinshead, Whitney D., Varman, Arul M., You, Le, Hembree, Zachary, Tang, Yinjie J.

“…•Anaerobic digestion effluents provide N/P nutrients for cyanobacterial cultivation.•Acetate-rich effluents enhance d-lactate synthesis from engineered…”
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