Search Results - "Taillon, Bruce E"

Paired-End Mapping Reveals Extensive Structural Variation in the Human Genome by Korbel, Jan O, Urban, Alexander Eckehart, Affourtit, Jason P, Godwin, Brian, Grubert, Fabian, Simons, Jan Fredrik, Kim, Philip M, Palejev, Dean, Carriero, Nicholas J, Du, Lei, Taillon, Bruce E, Chen, Zhoutao, Tanzer, Andrea, Saunders, A.C. Eugenia, Chi, Jianxiang, Yang, Fengtang, Carter, Nigel P, Hurles, Matthew E, Weissman, Sherman M, Harkins, Timothy T, Gerstein, Mark B, Egholm, Michael, Snyder, Michael

“…Structural variation of the genome involves kilobase- to megabase-sized deletions, duplications, insertions, inversions, and complex combinations of…”
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Deoptimization of FMDV P1 Region Results in Robust Serotype-Independent Viral Attenuation by Medina, Gisselle N, Spinard, Edward, Azzinaro, Paul A, Rodriguez-Calzada, Monica, Gutkoska, Joseph, Kloc, Anna, Rieder, Elizabeth A, Taillon, Bruce E, Mueller, Stephen, de Los Santos, Teresa, Segundo, Fayna Diaz-San

“…Foot-and-mouth disease (FMD), caused by the FMD virus (FMDV), is a highly contagious disease of cloven-hoofed livestock that can have severe economic impacts…”
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The evolutionary analysis of emerging low frequency HIV-1 CXCR4 using variants through time--an ultra-deep approach by Archer, John, Rambaut, Andrew, Taillon, Bruce E, Harrigan, P Richard, Lewis, Marilyn, Robertson, David L

“…Large-scale parallel pyrosequencing produces unprecedented quantities of sequence data. However, when generated from viral populations current mapping software…”
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Transcriptome sequencing of malignant pleural mesothelioma tumors by Sugarbaker, David J, Richards, William G, Gordon, Gavin J, Dong, Lingsheng, De Rienzo, Assunta, Maulik, Gautam, Glickman, Jonathan N, Chirieac, Lucian R, Hartman, Mor-Li, Taillon, Bruce E, Du, Lei, Bouffard, Pascal, Kingsmore, Stephen F, Miller, Neil A, Farmer, Andrew D, Jensen, Roderick V, Gullans, Steven R, Bueno, Raphael

“…Cancers arise by the gradual accumulation of mutations in multiple genes. We now use shotgun pyrosequencing to characterize RNA mutations and expression levels…”
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Second generation sequencing of the mesothelioma tumor genome by Bueno, Raphael, De Rienzo, Assunta, Dong, Lingsheng, Gordon, Gavin J, Hercus, Colin F, Richards, William G, Jensen, Roderick V, Anwar, Arif, Maulik, Gautam, Chirieac, Lucian R, Ho, Kim-Fong, Taillon, Bruce E, Turcotte, Cynthia L, Hercus, Robert G, Gullans, Steven R, Sugarbaker, David J

“…The current paradigm for elucidating the molecular etiology of cancers relies on the interrogation of small numbers of genes, which limits the scope of…”
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Analysis of TSC Cortical Tubers by Deep Sequencing of TSC1, TSC2 and KRAS Demonstrates that Small Second-Hit Mutations in these Genes are Rare Events by Qin, Wei, Chan, Jennifer A., Vinters, Harry V., Mathern, Gary W., Franz, David N., Taillon, Bruce E., Bouffard, Pascal, Kwiatkowski, David J.

“…Tuberous sclerosis complex (TSC) is an often severe neurocutaneous syndrome. Cortical tubers are the predominant neuropathological finding in TSC, and their…”
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Ultra deep sequencing detects a low rate of mosaic mutations in tuberous sclerosis complex by Qin, Wei, Kozlowski, Piotr, Taillon, Bruce E, Bouffard, Pascal, Holmes, Alison J, Janne, Pasi, Camposano, Susana, Thiele, Elizabeth, Franz, David, Kwiatkowski, David J

“…Tuberous sclerosis complex (TSC) is an autosomal dominant neurocutaneous syndrome caused by mutations in TSC1 and TSC2. However, 10-15% TSC patients have no…”
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Detection of low-frequency pretherapy chemokine (CXC motif) receptor 4 (CXCR4)-using HIV-1 with ultra-deep pyrosequencing by ARCHER, John, BRAVERMAN, Michael S, TAILLON, Bruce E, DESANY, Brian, JAMES, Ian, HARRIGAN, P. Richard, LEWIS, Marilyn, ROBERTSON, David L

“…Identification of low-frequency variants is of clinical importance in the identification of preexisting drug resistance. Using 'ultra-deep' sequencing, we…”
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"One plate/three-reporter" assay format for the detection and validation of yeast two-hybrid interactions by Evans, David R H, Swirsding, Kendra A, Taillon, Bruce E, Simons, Jan F

“…We describe a novel assay format for the Gal4-based yeast two-hybrid-system, in which the readout from three different reporter genes is measured sequentially…”
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BIA/MS of Epitope-Tagged Peptides Directly from E. Coli Lysate:  Multiplex Detection and Protein Identification at Low-Femtomole to Subfemtomole Levels by Nelson, Randall W, Jarvik, Jonathan W, Taillon, Bruce E, Tubbs, Kemmons A

“…The use of biomolecular interaction analysis mass spectrometry to selectively isolate, detect, and characterize epitope-tagged peptides present in total cell…”
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Simultaneous gene expression analysis of steady‐state and actively translated mRNA populations from osteosarcoma MG‐63 cells in response to IL‐1α via an open expression analysis platform by Ju, Jingfang, Huang, Chunli, Minskoff, Stacey A., Mayotte, Jane E., Taillon, Bruce E., Simons, Jan F.

“…Pro‐inflammatory cytokines play a key role in various forms of metabolic bone diseases, including osteopenia and osteoporosis. Human MG‐63 cells treated with…”
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Mutational analysis of centrin: an EF-hand protein associated with three distinct contractile fibers in the basal body apparatus of Chlamydomonas by Taillon, B.E. (Carnegie Mellon University, Pittsburgh, PA), Adler, S.A, Suhan, J.P, Jarvik, J.W

“…Centrin, a 20-kD phosphoprotein with four calcium-binding EF-hands, is present in the centrosome/basal body apparatus of the green alga Chlamydomonas…”
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WECHE: A Novel Hematopoietic Regulatory Factor by Ohneda, Osamu, Ohneda, Kinuko, Nomiyama, Hisayuki, Zheng, Zhong, Gold, Steven A, Arai, Fumio, Miyamoto, Takeshi, Taillon, Bruce E, McIndoe, Richard A, Shimkets, Richard A, Lewin, David A, Suda, Toshio, Lasky, Laurence A

“…Previously, we described AGM-derived endothelial cell lines that either inhibited or permitted the development of erythroid or B cells. We utilized a…”
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The Melanoma Vascular Mimicry Phenotype Defined in Gene Expression and Microsome Sequencing Analysis by JINGFANG JU, LUCA RASTELLI, URIEL M. MALYANKER, JAN F. SIMONS, CHUNLI HUANG, JOHN HERRMANN, JOHN R. MACDOUGALL, BRUCE E. TAILLON

“…The phenomenon of vasculogenic mimicry in melanoma has been recently described to be an important factor relating to melanoma progression. Large scale gene…”
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The evolutionary analysis of emerging low frequency HIV-1 CXCR4 using variants through time--an ultradeep approach by Archer, John, Rambaut, Andrew, Taillon, Bruce E, Harrigan, P. Richard, Lewis, Marilyn, Robertson, David L

“…Large-scale parallel pyrosequencing produces unprecedented quantities of sequence data. However, when generated from viral populations current mapping software…”
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The Evolutionary Analysis of Emerging Low Frequency HIV-1 CXCR4 Using Variants through Time--An Ultra-Deep Approach: e1001022 by Archer, John, Rambaut, Andrew, Taillon, Bruce E, Harrigan, P Richard, Lewis, Marilyn, Robertson, David L

“…Large-scale parallel pyrosequencing produces unprecedented quantities of sequence data. However, when generated from viral populations current mapping software…”
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Open systems: panoramic views of gene expression by Green, Cynthia D., Simons, Jan Fredrik, Taillon, Bruce E., Lewin, David A.

“…Since their development in the early 1990s, differential gene expression (DGE) technologies have been applied to a multitude of biological challenges, both for…”
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regA, a Volvox gene that plays a central role in germ-soma differentiation, encodes a novel regulatory protein by Kirk, M M, Stark, K, Miller, S M, Müller, W, Taillon, B E, Gruber, H, Schmitt, R, Kirk, D L

“…Volvox has two cell types: mortal somatic cells and immortal germ cells. Here we describe the transposon-tagging, cloning and characterization of regA, which…”
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STV1 gene encodes functional homologue of 95-kDa yeast vacuolar H+-ATPase subunit Vph1p by Manolson, M.F, Wu, B, Proteau, D, Taillon, B.E, Roberts, B.T, Hoyt, M.A, Jones, E.W

“…The Saccharomyces cerevisiae gene, VPH1 (Vacuolar pH 1), encodes a 95-kDa integral membrane subunit of the vacuolar-type H+-ATPase (V-ATPase) that is required…”
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Simultaneous gene expression analysis of steady-state and actively translated mRNA populations from osteosarcoma MG-63 cells in response to IL-1  via an open expression analysis platform by Ju, J.

“…Pro-inflammatory cytokines play a key role in various forms of metabolic bone diseases, including osteopenia and osteoporosis. Human MG-63 cells treated with…”
Get full text