Search Results - "Strittmatter, Eric F"

Characterization of the human blood plasma proteome by Shen, Yufeng, Kim, Jeongkwon, Strittmatter, Eric F., Jacobs, Jon M., Camp II, David G., Fang, Ruihua, Tolié, Nikola, Moore, Ronald J., Smith, Richard D.

“…We describe methods for broad characterization of the human plasma proteome. The combination of stepwise immunoglobulin G (IgG) and albumin protein depletion…”
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Two-Dimensional Gas-Phase Separations Coupled to Mass Spectrometry for Analysis of Complex Mixtures by Tang, Keqi, Li, Fumin, Shvartsburg, Alexandre A, Strittmatter, Eric F, Smith, Richard D

“…Ion mobility spectrometry (IMS) has been explored for decades, and its versatility in separation and identification of gas-phase ions is well established…”
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High-Throughput Comparative Proteome Analysis Using a Quantitative Cysteinyl-peptide Enrichment Technology by Liu, Tao, Qian, Wei-Jun, Strittmatter, Eric F, Camp, David G, Anderson, Gordon A, Thrall, Brian D, Smith, Richard D

“…A new quantitative cysteinyl-peptide enrichment technology (QCET) was developed to achieve higher efficiency, greater dynamic range, and higher throughput in…”
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Phosphoproteome Profiling of Human Skin Fibroblast Cells in Response to Low- and High-Dose Irradiation by Yang, Feng, Stenoien, David L, Strittmatter, Eric F, Wang, Junhua, Ding, Lianghao, Lipton, Mary S, Monroe, Matthew E, Nicora, Carrie D, Gristenko, Marina A, Tang, Keqi, Fang, Ruihua, Adkins, Joshua N, Camp, David G, Chen, David J, Smith, Richard D

“…A hallmark of the response to high-dose radiation is the up-regulation and phosphorylation of proteins involved in cell cycle checkpoint control, DNA damage…”
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Multidimensional Proteome Analysis of Human Mammary Epithelial Cells by Jacobs, Jon M, Mottaz, Heather M, Yu, Li-Rong, Anderson, David J, Moore, Ronald J, Chen, Wan-Nan U, Auberry, Kenneth J, Strittmatter, Eric F, Monroe, Matthew E, Thrall, Brian D, Camp, David G, Smith, Richard D

“…Recent multidimensional liquid chromatography MS/MS studies have contributed to the identification of large numbers of expressed proteins for numerous species…”
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Structures of Protonated Arginine Dimer and Bradykinin Investigated by Density Functional Theory:  Further Support for Stable Gas-Phase Salt Bridges by Strittmatter, Eric F, Williams, Evan R

“…The gas-phase structures and energetics of both protonated arginine dimer and protonated bradykinin were investigated using a combination of molecular…”
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High Mass Measurement Accuracy Determination for Proteomics Using Multivariate Regression Fitting:  Application to Electrospray Ionization Time-Of-Flight Mass Spectrometry by Strittmatter, Eric F, Rodriguez, Nestor, Smith, Richard D

“…Important factors that limit the mass measurement accuracy from a mass spectrometer are related to (1) the type of mass analyzer used and (2) the data…”
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An automated high performance capillary liquid chromatography-Fourier transform ion cyclotron resonance mass spectrometer for high-throughput proteomics by Belov, Mikhail E, Anderson, Gordon A, Wingerd, Mark A, Udseth, Harold R, Tang, Keqi, Prior, David C, Swanson, Kenneth R, Buschbach, Michael A, Strittmatter, Eric F, Moore, Ronald J, Smith, Richard D

“…We describe a fully automated high performance liquid chromatography 9.4 tesla Fourier transform ion resonance cyclotron (FTICR) mass spectrometer system…”
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Comparison of Normal and Breast Cancer Cell Lines Using Proteome, Genome, and Interactome Data by Patwardhan, Anil J, Strittmatter, Eric F, Camp, David G, Smith, Richard D, Pallavicini, Maria G

“…Normal and cancer cell line proteomes were profiled using high throughput mass spectrometry techniques. Application of protein-level and peptide-level sample…”
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Effects of Charge State on Fragmentation Pathways, Dynamics, and Activation Energies of Ubiquitin Ions Measured by Blackbody Infrared Radiative Dissociation by Jockusch, Rebecca A, Schnier, Paul D, Price, William D, Strittmatter, Eric. F, Demirev, Plamen A, Williams, Evan R

“…Blackbody infrared radiative dissociation spectra of the (M + 5H)5+ through (M + 11H)11+ ions of the protein ubiquitin (8.6 kDa) formed by electrospray…”
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Probability-Based Evaluation of Peptide and Protein Identifications from Tandem Mass Spectrometry and SEQUEST Analysis:  The Human Proteome by Qian, Wei-Jun, Liu, Tao, Monroe, Matthew E, Strittmatter, Eric F, Jacobs, Jon M, Kangas, Lars J, Petritis, Konstantinos, Camp, David G, Smith, Richard D

“…Large-scale protein identifications from highly complex protein mixtures have recently been achieved using multidimensional liquid chromatography coupled with…”
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Characterization of purified c-type heme-containing peptides and identification of c-type heme-attachment sites in Shewanella oneidenis cytochromes using mass spectrometry by Yang, Feng, Bogdanov, Bogdan, Strittmatter, Eric F, Vilkov, Andrey N, Gritsenko, Marina, Shi, Liang, Elias, Dwayne A, Ni, Shuisong, Romine, Margaret, Pasa-Tolić, Ljiljana, Lipton, Mary S, Smith, Richard D

“…We describe methods for mass spectrometric identification of heme-containing peptides from c-type cytochromes that contain the CXXCH (X=any amino acid)…”
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Dissociation energetics and mechanisms of leucine enkephalin (M + H) + and (2M + X) + ions (X = H, Li, Na, K, and Rb) measured by blackbody infrared radiative dissociation by Schnier, Paul D., Price, William D., Strittmatter, Eric F., Williams, Evan R.

“…The dissociation kinetics of protonated leucine enkephalin and its proton and alkali metal bound dimers were investigated by blackbody infrared radiative…”
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Improved Peptide Elution Time Prediction for Reversed-Phase Liquid Chromatography-MS by Incorporating Peptide Sequence Information by Petritis, Konstantinos, Kangas, Lars J, Yan, Bo, Monroe, Matthew E, Strittmatter, Eric F, Qian, Wei-Jun, Adkins, Joshua N, Moore, Ronald J, Xu, Ying, Lipton, Mary S, Camp, David G, Smith, Richard D

“…We describe an improved artificial neural network (ANN)-based method for predicting peptide retention times in reversed-phase liquid chromatography. In…”
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Identification of shed proteins from chinese hamster ovary cells: Application of statistical confidence using human and mouse protein databases by Ahram, Mamoun, Strittmatter, Eric F., Monroe, Matthew E., Adkins, Joshua N., Hunter, Joel C., Miller, John H., Springer, David L.

“…The shedding process releases ligands, receptors, and other proteins from the surface of the cell and is a mechanism whereby cells communicate. Even though…”
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Use of Artificial Neural Networks for the Accurate Prediction of Peptide Liquid Chromatography Elution Times in Proteome Analyses by Petritis, Konstantinos, Kangas, Lars J, Ferguson, Patrick L, Anderson, Gordon A, Paša-Tolić, Ljiljana, Lipton, Mary S, Auberry, Kenneth J, Strittmatter, Eric F, Shen, Yufeng, Zhao, Rui, Smith, Richard D

“…The use of artificial neural networks (ANNs) is described for predicting the reversed-phase liquid chromatography retention times of peptides enzymatically…”
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Application of Peptide LC Retention Time Information in a Discriminant Function for Peptide Identification by Tandem Mass Spectrometry by Strittmatter, Eric F, Kangas, Lars J, Petritis, Konstantinos, Mottaz, Heather M, Anderson, Gordon A, Shen, Yufeng, Jacobs, Jon M, Camp, David G, Smith, Richard D

“…We describe the application of a peptide retention time reversed phase liquid chromatography (RPLC) prediction model previously reported (Petritis et al. Anal…”
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Proteome analyses using accurate mass and elution time peptide tags with capillary LC time-of-flight mass spectrometry by Strittmatter, Eric F, Ferguson, P.Lee, Tang, Keqi, Smith, Richard D

“…We describe the application of capillary liquid chromatography (LC) time-of-flight (TOF) mass spectrometric instrumentation for the rapid characterization of…”
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Automated Gain Control and Internal Calibration with External Ion Accumulation Capillary Liquid Chromatography-Electrospray Ionization-Fourier Transform Ion Cyclotron Resonance by Belov, Mikhail E, Zhang, Rui, Strittmatter, Eric F, Prior, David C, Tang, Keqi, Smith, Richard D

“…When combined with capillary LC separations, electrospray ionization-Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR MS) has…”
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Post-translational Modifications of Chicken Myelin Basic Protein Charge Components by Kim, Jeongkwon, Zhang, Rui, Strittmatter, Eric F., Smith, Richard D., Zand, Robert

“…Purified myelin basic protein (MBP) from various species contains several post-translationally modified forms termed charge components or charge isomers…”
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